belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_6G00400200 |
| rosa_samantha | Rh2AG571600 Rh2BG408300 Rh2DG420500 Rh4DG064500 Rh6CG477300 Rh7AG383400 Rh7CG072700 Rh7CG403000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 98 |
| AcuI | CTGAAG | 2 cut(s) | 57, 150 |
| AgsI | TTSAA | 2 cut(s) | 37, 106 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AluBI | AGCT | 1 cut(s) | 32 |
| AluI | AGCT | 1 cut(s) | 32 |
| AoxI | GGCC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 2 cut(s) | 44, 91 |
| AvaII | GGWCC | 2 cut(s) | 44, 91 |
| BbsI | GAAGAC | 1 cut(s) | 138 |
| BceAI | ACGGC | 1 cut(s) | 94 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| Bme1390I | CCNGG | 1 cut(s) | 42 |
| Bme18I | GGWCC | 2 cut(s) | 44, 91 |
| BmgT120I | GGNCC | 2 cut(s) | 44, 91 |
| BmrFI | CCNGG | 1 cut(s) | 42 |
| BoxI | GACNNNNGTC | 1 cut(s) | 138 |
| BpiI | GAAGAC | 1 cut(s) | 138 |
| BpuEI | CTTGAG | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 1 cut(s) | 40 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 40 |
| BseMII | CTCAG | 1 cut(s) | 26 |
| Bsh1236I | CGCG | 1 cut(s) | 98 |
| BshFI | GGCC | 1 cut(s) | 70 |
| BslFI | GGGAC | 1 cut(s) | 97 |
| BsmFI | GGGAC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 70 |
| Bsp68I | TCGCGA | 1 cut(s) | 98 |
| BspANI | GGCC | 1 cut(s) | 70 |
| BspCNI | CTCAG | 1 cut(s) | 25 |
| BspFNI | CGCG | 1 cut(s) | 98 |
| BspMAI | CTGCAG | 1 cut(s) | 55 |
| BssECI | CCNNGG | 1 cut(s) | 40 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstFNI | CGCG | 1 cut(s) | 98 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 138 |
| BstSCI | CCNGG | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstUI | CGCG | 1 cut(s) | 98 |
| BstV2I | GAAGAC | 1 cut(s) | 138 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 143 |
| BsuRI | GGCC | 1 cut(s) | 70 |
| BtsI | GCAGTG | 1 cut(s) | 149 |
| BtsIMutI | CAGTG | 1 cut(s) | 149 |
| BtuMI | TCGCGA | 1 cut(s) | 98 |
| Cfr13I | GGNCC | 2 cut(s) | 44, 91 |
| CviAII | CATG | 1 cut(s) | 143 |
| CviJI | RGCY | 3 cut(s) | 32, 70, 109 |
| CviKI_1 | RGCY | 3 cut(s) | 32, 70, 109 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| Eco147I | AGGCCT | 1 cut(s) | 70 |
| Eco47I | GGWCC | 2 cut(s) | 44, 91 |
| Eco57I | CTGAAG | 2 cut(s) | 57, 150 |
| EcoO109I | RGGNCCY | 1 cut(s) | 91 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| FaeI | CATG | 1 cut(s) | 146 |
| FaiI | YATR | 1 cut(s) | 144 |
| FaqI | GGGAC | 1 cut(s) | 97 |
| FatI | CATG | 1 cut(s) | 142 |
| HaeIII | GGCC | 1 cut(s) | 70 |
| Hin1II | CATG | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 2 cut(s) | 97, 128 |
| HpyAV | CCTTC | 2 cut(s) | 57, 81 |
| HpyCH4V | TGCA | 2 cut(s) | 23, 53 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| Hsp92II | CATG | 1 cut(s) | 146 |
| LpnPI | CCDG | 6 cut(s) | 27, 42, 54, 60, 140, 141 |
| MboII | GAAGA | 1 cut(s) | 143 |
| MnlI | CCTC | 3 cut(s) | 95, 104, 125 |
| MspR9I | CCNGG | 1 cut(s) | 42 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| MvnI | CGCG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NlaIII | CATG | 1 cut(s) | 146 |
| NruI | TCGCGA | 1 cut(s) | 98 |
| PceI | AGGCCT | 1 cut(s) | 70 |
| PpuMI | RGGWCCY | 1 cut(s) | 91 |
| PshAI | GACNNNNGTC | 1 cut(s) | 138 |
| Psp5II | RGGWCCY | 1 cut(s) | 91 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| PspPI | GGNCC | 2 cut(s) | 44, 91 |
| PspPPI | RGGWCCY | 1 cut(s) | 91 |
| PstI | CTGCAG | 1 cut(s) | 55 |
| RruI | TCGCGA | 1 cut(s) | 98 |
| Sau96I | GGNCC | 2 cut(s) | 44, 91 |
| ScrFI | CCNGG | 1 cut(s) | 42 |
| SetI | ASST | 4 cut(s) | 34, 49, 87, 96 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| SinI | GGWCC | 2 cut(s) | 44, 91 |
| SmlI | CTYRAG | 1 cut(s) | 86 |
| SmoI | CTYRAG | 1 cut(s) | 86 |
| SseBI | AGGCCT | 1 cut(s) | 70 |
| StuI | AGGCCT | 1 cut(s) | 70 |
| StyD4I | CCNGG | 1 cut(s) | 40 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 156 |
| VpaK11BI | GGWCC | 2 cut(s) | 44, 91 |