Rh3AG085000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
6844697 .. 6847760
3064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG085000.1

Sequence Viewer

Length: 1140 bp
ATGGCTTCTGTGGGTGTGGCACCTACATCAGGTTTGAGAGAACCAAGTGGTCATGCTGTTGGCGTGGATAAGTTGCCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAAACAATTAGTTACATGGCTGAGCGTGTTGTCGGGCATGGATCATTTGGAGTTGTGTTCCAAGCAAAGTGCTTAGAGACTGGTGAAACTGTTGCTATAAAGAAGGTTCTGCAAGACAAGAGGTACAAAAACCGTGAGCTGCAAACCATGCGTCTGCTTGACCACCCAAATGTTGTATCTTTGAAGCATTGCTTCTTTTCAACAACTGAAAAGGATGAACTTTATCTCAACCTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGTGTGATTAAACACTACAACAAGTTGAACCAACGGATGCCCCTCATATATGTTAAGCTCTACACGTACCAGATCTTCAGGGCATTATCCTACATTCACCGCTGCATTGGTGTGTGTCATCGGGACATTAAGCCTCAAAACCTTCTGGTGAATCCACATACCCACCAAGTAAAGTTGTGTGACTTTGGAAGTGCAAAAGTTTTGGTAAAAGGAGAGCCAAATATATCTTACATCTGCTCTAGATATTATAGAGCACCAGAACTCATATTTGGAGCAACTGAGTATACTACAGCTATTGACGTCTGGTCTGTTGGATGTGTTCTTGCTGAGCTATTGCTTGGACAGCCGTTGTTTCCCGGTGAGAGTGGAGTCGACCAGCTTGTTGAGATTATCAAGGTATTGGGCACTCCAACAAGGGAGGAAATCAAATGCATGAACCCTAACTATACGGAGTTCAAATTCCCTCAAATTAAAGCTCACCCTTGGCACAAGATTTTCCACAAGCGTATGCCTCCAGAAGCTGTTGACCTGGTTTCAAGACTATTGCAATACTCTCCTAACTTGCGGTGCACAGCTCTGGATGCCTTGACCCATCCCTTTTTCGATGAACTACGTGACTTGAACACCCGCCTGCCAAATGGACGTTTCCTTCCACCTTTGTTCAACTTTAAATCTCATGAATTGAAGGGGGTCCCTGCTGAGATTTTGATGAAATTGGTCCCAGAGCATGCAAGAAAGCAAGTCCCATTCTTTGCGTCTGACTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

379

Amino Acids

43.38

Weight (kDa)

8.81

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 43 - 326 2.1e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 45 - 245 8.1e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 678
AccB1I GGYRCC 1 cut(s) 19
AccI GTMKAC 2 cut(s) 659, 747
AciI CCGC 3 cut(s) 475, 940, 1003
AclWI GGATC 1 cut(s) 160
AcsI RAATTY 1 cut(s) 833
AcuI CTGAAG 1 cut(s) 436
AcyI GRCGYC 1 cut(s) 675
AfaI GTAC 3 cut(s) 236, 348, 443
AfiI CCNNNNNNNGG 1 cut(s) 29
AflIII ACRYGT 1 cut(s) 438
AgsI TTSAA 8 cut(s) 295, 312, 403, 832, 912, 997, 1039, 1060
AhdI GACNNNNNGTC 1 cut(s) 679
AjnI CCWGG 2 cut(s) 342, 903
AjuI GAANNNNNNNTTGG 2 cut(s) 627, 659
AluBI AGCT 8 cut(s) 250, 433, 668, 706, 754, 851, 896, 950
AluI AGCT 8 cut(s) 250, 433, 668, 706, 754, 851, 896, 950
Alw21I GWGCWC 2 cut(s) 631, 947
Alw26I GTCTC 1 cut(s) 182
Alw44I GTGCAC 1 cut(s) 943
AlwI GGATC 1 cut(s) 160
AlwNI CAGNNNCTG 1 cut(s) 896
Ama87I CYCGRG 1 cut(s) 77
ApaLI GTGCAC 1 cut(s) 943
ApeKI GCWGC 2 cut(s) 250, 477
ApoI RAATTY 1 cut(s) 833
ArsI GACNNNNNNTTYG 2 cut(s) 247, 279
Asp700I GAANNNNTTC 1 cut(s) 369
AspS9I GGNCC 2 cut(s) 1066, 1093
AsuC2I CCSGG 1 cut(s) 732
AsuHPI GGTGA 5 cut(s) 206, 464, 535, 746, 845
AvaI CYCGRG 1 cut(s) 77
AvaII GGWCC 2 cut(s) 1066, 1093
BaeGI GKGCMC 2 cut(s) 782, 947
BaeI ACNNNNGTAYC 2 cut(s) 338, 371
BanI GGYRCC 1 cut(s) 19
BarI GAAGNNNNNNTAC 2 cut(s) 434, 466
Bbv12I GWGCWC 2 cut(s) 631, 947
BbvI GCAGC 2 cut(s) 237, 464
BccI CCATC 1 cut(s) 975
BceAI ACGGC 1 cut(s) 706
BciT130I CCWGG 2 cut(s) 344, 905
BcnI CCSGG 1 cut(s) 732
BcoDI GTCTC 1 cut(s) 182
BfaI CTAG 2 cut(s) 615, 1138
BfmI CTRYAG 1 cut(s) 663
BglII AGATCT 1 cut(s) 447
BisI GCNGC 2 cut(s) 251, 478
BlpI GCTNAGC 2 cut(s) 132, 702
BlsI GCNGC 2 cut(s) 252, 479
Bme1390I CCNGG 3 cut(s) 344, 732, 905
Bme18I GGWCC 2 cut(s) 1066, 1093
BmeRI GACNNNNNGTC 1 cut(s) 679
BmeT110I CYCGRG 1 cut(s) 77
BmgT120I GGNCC 2 cut(s) 1066, 1093
BmiI GGNNCC 4 cut(s) 21, 1067, 1068, 1095
BmrFI CCNGG 3 cut(s) 344, 732, 905
BmsI GCATC 2 cut(s) 402, 946
BpmI CTGGAG 1 cut(s) 873
Bpu1102I GCTNAGC 2 cut(s) 132, 702
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 1 cut(s) 732
BsaAI YACGTR 2 cut(s) 441, 989
BsaHI GRCGYC 1 cut(s) 675
BsaJI CCNNGG 2 cut(s) 78, 857
Bsc4I CCNNNNNNNGG 1 cut(s) 29
Bse1I ACTGG 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 298
BseBI CCWGG 2 cut(s) 344, 905
BseDI CCNNGG 2 cut(s) 78, 857
BseGI GGATG 6 cut(s) 112, 331, 417, 695, 961, 967
BseLI CCNNNNNNNGG 1 cut(s) 29
BseMI GCAATG 1 cut(s) 298
BseMII CTCAG 4 cut(s) 123, 645, 693, 1065
BseNI ACTGG 1 cut(s) 196
BseRI GAGGAG 1 cut(s) 95
BseSI GKGCMC 2 cut(s) 782, 947
BseXI GCAGC 2 cut(s) 237, 464
BshNI GGYRCC 1 cut(s) 19
BsiHKAI GWGCWC 2 cut(s) 631, 947
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 1 cut(s) 732
BslFI GGGAC 4 cut(s) 512, 1052, 1079, 1103
BslI CCNNNNNNNGG 1 cut(s) 29
BsmAI GTCTC 1 cut(s) 182
BsmFI GGGAC 4 cut(s) 512, 1052, 1079, 1103
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 631, 782, 947
Bsp143I GATC 2 cut(s) 152, 447
Bsp1720I GCTNAGC 2 cut(s) 132, 702
BspACI CCGC 3 cut(s) 475, 940, 1003
BspCNI CTCAG 4 cut(s) 124, 646, 694, 1066
BspHI TCATGA 1 cut(s) 1051
BspLI GGNNCC 4 cut(s) 21, 1067, 1068, 1095
BspPI GGATC 1 cut(s) 160
BspT107I GGYRCC 1 cut(s) 19
BsrDI GCAATG 1 cut(s) 298
BsrI ACTGG 1 cut(s) 196
BssECI CCNNGG 2 cut(s) 78, 857
BssMI GATC 2 cut(s) 152, 447
BssNAI GTATAC 1 cut(s) 660
BssNI GRCGYC 1 cut(s) 675
BssT1I CCWWGG 1 cut(s) 857
Bst1107I GTATAC 1 cut(s) 660
Bst2UI CCWGG 2 cut(s) 344, 905
Bst4CI ACNGT 3 cut(s) 202, 245, 370
BstACI GRCGYC 1 cut(s) 675
BstAPI GCANNNNNTGC 1 cut(s) 259
BstBAI YACGTR 2 cut(s) 441, 989
BstC8I GCNNGC 2 cut(s) 1007, 1104
BstDEI CTNAG 5 cut(s) 132, 184, 654, 702, 1074
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 6 cut(s) 112, 331, 417, 695, 961, 967
BstKTI GATC 2 cut(s) 155, 450
BstMAI GTCTC 1 cut(s) 182
BstMBI GATC 2 cut(s) 152, 447
BstMWI GCNNNNNNNGC 3 cut(s) 259, 718, 956
BstNI CCWGG 2 cut(s) 344, 905
BstNSI RCATGY 1 cut(s) 1106
BstSCI CCNGG 3 cut(s) 342, 730, 903
BstSFI CTRYAG 1 cut(s) 663
BstSLI GKGCMC 2 cut(s) 782, 947
BstV1I GCAGC 2 cut(s) 237, 464
BstX2I RGATCY 1 cut(s) 447
BstYI RGATCY 1 cut(s) 447
BstZ17I GTATAC 1 cut(s) 660
BtsCI GGATG 6 cut(s) 112, 331, 417, 695, 961, 967
Cac8I GCNNGC 2 cut(s) 1007, 1104
CaiI CAGNNNCTG 1 cut(s) 896
CciI TCATGA 1 cut(s) 1051
Cfr13I GGNCC 2 cut(s) 1066, 1093
CseI GACGC 2 cut(s) 251, 1119
CsiI ACCWGGT 2 cut(s) 342, 903
Csp6I GTAC 3 cut(s) 235, 347, 442
CviAII CATG 8 cut(s) 53, 94, 127, 149, 259, 808, 1052, 1103
CviQI GTAC 3 cut(s) 235, 347, 442
DdeI CTNAG 5 cut(s) 132, 184, 654, 702, 1074
DpnI GATC 2 cut(s) 154, 449
DpnII GATC 2 cut(s) 152, 447
DraI TTTAAA 1 cut(s) 1045
DriI GACNNNNNGTC 1 cut(s) 679
Eam1105I GACNNNNNGTC 1 cut(s) 679
Eco130I CCWWGG 1 cut(s) 857
Eco47I GGWCC 2 cut(s) 1066, 1093
Eco57I CTGAAG 1 cut(s) 436
Eco88I CYCGRG 1 cut(s) 77
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 1066
EcoRII CCWGG 2 cut(s) 342, 903
EcoT14I CCWWGG 1 cut(s) 857
EcoT22I ATGCAT 1 cut(s) 809
ErhI CCWWGG 1 cut(s) 857
FaeI CATG 8 cut(s) 56, 97, 130, 152, 262, 811, 1055, 1106
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FaqI GGGAC 4 cut(s) 512, 1052, 1079, 1103
FatI CATG 8 cut(s) 52, 93, 126, 148, 258, 807, 1051, 1102
FauI CCCGC 1 cut(s) 1010
FblI GTMKAC 2 cut(s) 659, 747
Fnu4HI GCNGC 2 cut(s) 251, 478
FokI GGATG 6 cut(s) 119, 338, 424, 702, 954, 968
Fsp4HI GCNGC 2 cut(s) 251, 478
FspBI CTAG 2 cut(s) 615, 1138
GluI GCNGC 2 cut(s) 251, 478
GsuI CTGGAG 1 cut(s) 873
HapII CCGG 1 cut(s) 732
HgaI GACGC 2 cut(s) 251, 1119
Hin1I GRCGYC 1 cut(s) 675
Hin1II CATG 8 cut(s) 56, 97, 130, 152, 262, 811, 1055, 1106
HincII GTYRAC 2 cut(s) 748, 901
HindII GTYRAC 2 cut(s) 748, 901
HinfI GANTC 2 cut(s) 526, 744
HpaII CCGG 1 cut(s) 732
HphI GGTGA 5 cut(s) 206, 464, 535, 746, 845
Hpy166II GTNNAC 4 cut(s) 660, 748, 901, 945
Hpy188I TCNGA 1 cut(s) 1135
Hpy188III TCNNGA 7 cut(s) 362, 497, 615, 890, 912, 953, 1052
Hpy8I GTNNAC 4 cut(s) 660, 748, 901, 945
HpyAV CCTTC 4 cut(s) 208, 527, 1034, 1054
HpyCH4III ACNGT 3 cut(s) 202, 245, 370
HpyCH4IV ACGT 4 cut(s) 440, 675, 988, 1018
HpyCH4V TGCA 8 cut(s) 223, 253, 480, 569, 807, 922, 945, 1106
HpyF10VI GCNNNNNNNGC 3 cut(s) 259, 718, 956
HpyF3I CTNAG 5 cut(s) 132, 184, 654, 702, 1074
HpySE526I ACGT 4 cut(s) 440, 675, 988, 1018
Hsp92I GRCGYC 1 cut(s) 675
Hsp92II CATG 8 cut(s) 56, 97, 130, 152, 262, 811, 1055, 1106
KflI GGGWCCC 1 cut(s) 1066
Kzo9I GATC 2 cut(s) 152, 447
LmnI GCTCC 1 cut(s) 647
Lsp1109I GCAGC 2 cut(s) 237, 464
LweI GCATC 2 cut(s) 402, 946
MabI ACCWGGT 2 cut(s) 342, 903
MaeI CTAG 2 cut(s) 615, 1138
MaeII ACGT 4 cut(s) 440, 675, 988, 1018
MaeIII GTNAC 3 cut(s) 122, 554, 989
MalI GATC 2 cut(s) 154, 449
MboI GATC 2 cut(s) 152, 447
MboII GAAGA 1 cut(s) 442
MflI RGATCY 1 cut(s) 447
MhlI GDGCHC 3 cut(s) 631, 782, 947
MluCI AATT 6 cut(s) 99, 117, 833, 843, 1055, 1088
MlyI GAGTC 1 cut(s) 753
MmeI TCCRAC 2 cut(s) 667, 809
MnlI CCTC 7 cut(s) 73, 225, 428, 519, 787, 849, 897
Mph1103I ATGCAT 1 cut(s) 809
MroXI GAANNNNTTC 1 cut(s) 369
MseI TTAA 5 cut(s) 384, 429, 504, 846, 1044
MslI CAYNNNNRTG 2 cut(s) 279, 485
MspA1I CMGCKG 1 cut(s) 477
MspI CCGG 1 cut(s) 732
MspR9I CCNGG 3 cut(s) 344, 732, 905
MvaI CCWGG 2 cut(s) 344, 905
MwoI GCNNNNNNNGC 3 cut(s) 259, 718, 956
NciI CCSGG 1 cut(s) 732
NdeII GATC 2 cut(s) 152, 447
NlaIII CATG 8 cut(s) 56, 97, 130, 152, 262, 811, 1055, 1106
NlaIV GGNNCC 4 cut(s) 21, 1067, 1068, 1095
NmuCI GTSAC 2 cut(s) 554, 989
NsiI ATGCAT 1 cut(s) 809
NspI RCATGY 1 cut(s) 1106
PaeI GCATGC 1 cut(s) 1106
PagI TCATGA 1 cut(s) 1051
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 1 cut(s) 526
PkrI GCNGC 2 cut(s) 252, 479
PleI GAGTC 1 cut(s) 752
PpsI GAGTC 1 cut(s) 752
Ppu21I YACGTR 2 cut(s) 441, 989
PpuMI RGGWCCY 1 cut(s) 1066
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 2 cut(s) 342, 903
PspGI CCWGG 2 cut(s) 342, 903
PspN4I GGNNCC 4 cut(s) 21, 1067, 1068, 1095
PspPI GGNCC 2 cut(s) 1066, 1093
PspPPI RGGWCCY 1 cut(s) 1066
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 1 cut(s) 447
RsaI GTAC 3 cut(s) 236, 348, 443
RsaNI GTAC 3 cut(s) 235, 347, 442
RseI CAYNNNNRTG 2 cut(s) 279, 485
SalI GTCGAC 1 cut(s) 746
SaqAI TTAA 5 cut(s) 384, 429, 504, 846, 1044
SatI GCNGC 2 cut(s) 251, 478
Sau3AI GATC 2 cut(s) 152, 447
Sau96I GGNCC 2 cut(s) 1066, 1093
SchI GAGTC 1 cut(s) 753
ScrFI CCNGG 3 cut(s) 344, 732, 905
SduI GDGCHC 3 cut(s) 631, 782, 947
SexAI ACCWGGT 2 cut(s) 342, 903
SfaNI GCATC 2 cut(s) 402, 946
SfcI CTRYAG 1 cut(s) 663
SinI GGWCC 2 cut(s) 1066, 1093
SmiMI CAYNNNNRTG 2 cut(s) 279, 485
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
SphI GCATGC 1 cut(s) 1106
Sse9I AATT 6 cut(s) 99, 117, 833, 843, 1055, 1088
SsiI CCGC 3 cut(s) 475, 940, 1003
SspMI CTAG 2 cut(s) 615, 1138
StyD4I CCNGG 3 cut(s) 342, 730, 903
StyI CCWWGG 1 cut(s) 857
TaaI ACNGT 3 cut(s) 202, 245, 370
TaiI ACGT 4 cut(s) 443, 678, 991, 1021
TaqI TCGA 2 cut(s) 747, 978
TasI AATT 6 cut(s) 99, 117, 833, 843, 1055, 1088
TfiI GAWTC 1 cut(s) 526
Tru1I TTAA 5 cut(s) 384, 429, 504, 846, 1044
Tru9I TTAA 5 cut(s) 384, 429, 504, 846, 1044
TseFI GTSAC 2 cut(s) 554, 989
TseI GCWGC 2 cut(s) 250, 477
Tsp45I GTSAC 2 cut(s) 554, 989
TspDTI ATGAA 8 cut(s) 101, 110, 342, 362, 824, 996, 1068, 1100
TspGWI ACGGA 2 cut(s) 424, 839
VneI GTGCAC 1 cut(s) 943
VpaK11BI GGWCC 2 cut(s) 1066, 1093
XagI CCTNNNNNAGG 1 cut(s) 27
XapI RAATTY 1 cut(s) 833
XbaI TCTAGA 1 cut(s) 614
XceI RCATGY 1 cut(s) 1106
XmiI GTMKAC 2 cut(s) 659, 747
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 2 cut(s) 615, 1138
ZraI GACGTC 1 cut(s) 676
Zsp2I ATGCAT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.