Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00549

Orthogroup ID

OG0005949

Physical Location & Seq

Genomic Coordinates Reverse (-)

208543 .. 211599

Gene Structure 3057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G012420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGCTTCTGTGGGTGTGGCGCCTACATCAGGTTTGAGAGAACCAAGCGGTCATGCTGTTGGCGTGGATAAGTTGCCCGAGGAGATGAATGACATGAAAATTAGGGATGACAAAGAAATGGAAGCTACTGTTACAGTTGTTGATGGTAATGGAACCGAGACGGGCCATATAATTGTGACAACAATTGGTGGTAGAAATGGTCAGCCAAAGCAGACAATTAGTTACATGGCTGAGCGTGTTGTCGGGCATGGATCATTTGGAGTTGTGTTCCAAGCAAAGTGCTTAGAGACTGGTGAAACTGTTGCTATAAAGAAGGTTCTGCAAGACAAGAGGTACAAAAACCGTGAGCTGCAAACTATGCGTCTGCTTGACCACCCAAATGTTGTATCTTTGAAGCATTGCTTCTTTTCAACAACTGAAAAGGATGAACTTTATCTCAACCTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGTGTGATTAAACACTACAACAAGTTGAACCAACGGATGCCCCTCATATATGTTAAGCTCTACACGTACCAGATCTTTAGGGCATTATCCTACATTCACCGCTGCATTGGTGTGTGTCATCGGGACATTAAGCCTCAAAACCTTCTGGTGAATCCACATACTCACCAAGTAAAGTTGTGTGACTTTGGAAGTGCAAAAGTTTTGGTAAAAGGAGAGCCAAATATATCTTACATCTGCTCTAGATATTATAGAGCACCAGAACTCATATTTGGAGCAACTGAGTATACTACAGCTATTGACGTCTGGTCTGTTGGATGTGTTCTTGCTGAGCTATTGCTTGGACAGCCGTTGTTTCCCGGTGAGAGTGGAGTCGACCAGCTTGTTGAGATTATCAAGGTTTTGGGCACTCCAACAAGGGAGGAAATCAAATGCATGAACCCTAACTATACGGAGTTCAAATTCCCTCAAATTAAAGCTCACCCATGGCACAAGATTTTCCACAAGCGTATGCCTCCAGAAGCTGTTGACCTGGTTTCAAGACTATTGCAATACTCTCCTAACTTGCGGTGCACAGCTCTGGATGCCTTGACCCATCCCTTTTTCGATGAACTTCGTGACTTGAACACCCGCCTGCCAAATGGACGTTTCCTTCCACCTTTGTTCAACTTTAAATCTCATGAATTGAAGGGGGTCCCTGCTGAGGTTTTGATGAAATTGGTCCCAGAGCATGCAAGAAAGCAAGTCCCATTCTTTGCGTCTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009653 GO:0009888 GO:0009933 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032502 GO:0036211 GO:0042538 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0047484 GO:0048507 GO:0048518 GO:0048532 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050896 GO:0065007 GO:0071704 GO:0080134 GO:0140096 GO:1901000 GO:1901002 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko01521 ko04012 ko04062 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226

Pfam Domains

Protein Families

Pkinase

Protein Analysis

412

Amino Acids

46.76

Weight (kDa)

8.58

Isoelectric Point (pI)

34.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	76 - 359	2.7e-62	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	78 - 277	1e-24	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005949)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05840 AT3G05840 AT5G26751
fragaria_vesca	FvH4_6g08170 FvH4_6g08170 FvH4_6g08170 FvH4_6g08170 FvH4_6g08170
malus_domestica	MD04G1189400.v1.1 MD12G1202200.v1.1
prunus_persica	Prupe.6G307000_v2.0.a1 Prupe.6G307000_v2.0.a1 Prupe.6G307000_v2.0.a1 Prupe.6G307000_v2.0.a1 Prupe.6G307000_v2.0.a1 Prupe.6G307000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0458041
rosa_multiflora	Rmu_sc0000384.1_g000013
rosa_roxburghii	Rroxscaffold_6G00421330
rosa_rugosa	Rorug03G0024500 Rorug03G0024600
rosa_samantha	Rh3AG085000 Rh3BG087800 Rh3CG088300 Rh3DG088700
rosa_wichuraiana	Rw0G012420 Rw3G007240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	777
AccB1I	GGYRCC	1 cut(s)	19
AccI	GTMKAC	2 cut(s)	758, 846
AciI	CCGC	4 cut(s)	48, 574, 1039, 1102
AclWI	GGATC	1 cut(s)	259
AcsI	RAATTY	1 cut(s)	932
AcyI	GRCGYC	2 cut(s)	20, 774
AfaI	GTAC	3 cut(s)	335, 447, 542
AfiI	CCNNNNNNNGG	2 cut(s)	29, 1174
AflIII	ACRYGT	1 cut(s)	537
AgsI	TTSAA	8 cut(s)	394, 411, 502, 931, 1011, 1096, 1138, 1159
AhdI	GACNNNNNGTC	1 cut(s)	778
AjnI	CCWGG	2 cut(s)	441, 1002
AjuI	GAANNNNNNNTTGG	2 cut(s)	726, 758
AluBI	AGCT	9 cut(s)	125, 349, 532, 767, 805, 853, 950, 995, 1049
AluI	AGCT	9 cut(s)	125, 349, 532, 767, 805, 853, 950, 995, 1049
Alw21I	GWGCWC	2 cut(s)	730, 1046
Alw26I	GTCTC	2 cut(s)	152, 281
Alw44I	GTGCAC	1 cut(s)	1042
AlwI	GGATC	1 cut(s)	259
AlwNI	CAGNNNCTG	1 cut(s)	995
Ama87I	CYCGRG	1 cut(s)	77
AoxI	GGCC	1 cut(s)	163
ApaLI	GTGCAC	1 cut(s)	1042
ApeKI	GCWGC	2 cut(s)	349, 576
ApoI	RAATTY	1 cut(s)	932
ArsI	GACNNNNNNTTYG	2 cut(s)	346, 378
Asp700I	GAANNNNTTC	1 cut(s)	468
AspLEI	GCGC	1 cut(s)	22
AspS9I	GGNCC	3 cut(s)	163, 1165, 1192
AsuC2I	CCSGG	1 cut(s)	831
AsuHPI	GGTGA	6 cut(s)	305, 563, 629, 634, 845, 944
AvaI	CYCGRG	1 cut(s)	77
AvaII	GGWCC	2 cut(s)	1165, 1192
BaeGI	GKGCMC	2 cut(s)	881, 1046
BaeI	ACNNNNGTAYC	2 cut(s)	437, 470
BanI	GGYRCC	1 cut(s)	19
Bbv12I	GWGCWC	2 cut(s)	730, 1046
BbvCI	CCTCAGC	1 cut(s)	1173
BbvI	GCAGC	2 cut(s)	336, 563
BccI	CCATC	2 cut(s)	137, 1074
BceAI	ACGGC	1 cut(s)	805
BciT130I	CCWGG	2 cut(s)	443, 1004
BcnI	CCSGG	1 cut(s)	831
BcoDI	GTCTC	2 cut(s)	152, 281
BfaI	CTAG	2 cut(s)	714, 1237
BfmI	CTRYAG	1 cut(s)	762
BfoI	RGCGCY	1 cut(s)	23
BglII	AGATCT	1 cut(s)	546
BisI	GCNGC	2 cut(s)	350, 577
BlpI	GCTNAGC	2 cut(s)	231, 801
BlsI	GCNGC	2 cut(s)	351, 578
Bme1390I	CCNGG	3 cut(s)	443, 831, 1004
Bme18I	GGWCC	2 cut(s)	1165, 1192
BmeRI	GACNNNNNGTC	1 cut(s)	778
BmeT110I	CYCGRG	1 cut(s)	77
BmgT120I	GGNCC	3 cut(s)	163, 1165, 1192
BmiI	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
BmrFI	CCNGG	3 cut(s)	443, 831, 1004
BmsI	GCATC	2 cut(s)	501, 1045
BpmI	CTGGAG	1 cut(s)	972
Bpu10I	CCTNAGC	1 cut(s)	1173
Bpu1102I	GCTNAGC	2 cut(s)	231, 801
BpuEI	CTTGAG	1 cut(s)	470
BpuMI	CCSGG	1 cut(s)	831
BsaAI	YACGTR	1 cut(s)	540
BsaHI	GRCGYC	2 cut(s)	20, 774
BsaJI	CCNNGG	2 cut(s)	78, 956
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 1174
Bse1I	ACTGG	1 cut(s)	295
Bse3DI	GCAATG	1 cut(s)	397
BseBI	CCWGG	2 cut(s)	443, 1004
BseDI	CCNNGG	2 cut(s)	78, 956
BseGI	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
BseLI	CCNNNNNNNGG	2 cut(s)	29, 1174
BseMI	GCAATG	1 cut(s)	397
BseMII	CTCAG	4 cut(s)	222, 744, 792, 1164
BseNI	ACTGG	1 cut(s)	295
BseRI	GAGGAG	1 cut(s)	95
BseSI	GKGCMC	2 cut(s)	881, 1046
BseXI	GCAGC	2 cut(s)	336, 563
BshFI	GGCC	1 cut(s)	165
BshNI	GGYRCC	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	730, 1046
BsiHKCI	CYCGRG	1 cut(s)	77
BsiSI	CCGG	1 cut(s)	831
BslFI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
BslI	CCNNNNNNNGG	2 cut(s)	29, 1174
BsmAI	GTCTC	2 cut(s)	152, 281
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
BsnI	GGCC	1 cut(s)	165
BsoBI	CYCGRG	1 cut(s)	77
Bsp1286I	GDGCHC	3 cut(s)	730, 881, 1046
Bsp143I	GATC	2 cut(s)	251, 546
Bsp1720I	GCTNAGC	2 cut(s)	231, 801
Bsp19I	CCATGG	1 cut(s)	956
BspACI	CCGC	4 cut(s)	48, 574, 1039, 1102
BspANI	GGCC	1 cut(s)	165
BspCNI	CTCAG	4 cut(s)	223, 745, 793, 1165
BspHI	TCATGA	1 cut(s)	1150
BspLI	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
BspPI	GGATC	1 cut(s)	259
BspT107I	GGYRCC	1 cut(s)	19
BsrDI	GCAATG	1 cut(s)	397
BsrI	ACTGG	1 cut(s)	295
BssECI	CCNNGG	2 cut(s)	78, 956
BssMI	GATC	2 cut(s)	251, 546
BssNAI	GTATAC	1 cut(s)	759
BssNI	GRCGYC	2 cut(s)	20, 774
BssT1I	CCWWGG	1 cut(s)	956
Bst1107I	GTATAC	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	443, 1004
Bst4CI	ACNGT	5 cut(s)	130, 136, 301, 344, 469
BstACI	GRCGYC	2 cut(s)	20, 774
BstAPI	GCANNNNNTGC	1 cut(s)	358
BstBAI	YACGTR	1 cut(s)	540
BstC8I	GCNNGC	2 cut(s)	1106, 1203
BstDEI	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
BstDSI	CCRYGG	1 cut(s)	956
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	1 cut(s)	22
BstKTI	GATC	2 cut(s)	254, 549
BstMAI	GTCTC	2 cut(s)	152, 281
BstMBI	GATC	2 cut(s)	251, 546
BstMWI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
BstNI	CCWGG	2 cut(s)	443, 1004
BstNSI	RCATGY	1 cut(s)	1205
BstSCI	CCNGG	3 cut(s)	441, 829, 1002
BstSFI	CTRYAG	1 cut(s)	762
BstSLI	GKGCMC	2 cut(s)	881, 1046
BstV1I	GCAGC	2 cut(s)	336, 563
BstX2I	RGATCY	1 cut(s)	546
BstYI	RGATCY	1 cut(s)	546
BstZ17I	GTATAC	1 cut(s)	759
BsuRI	GGCC	1 cut(s)	165
BtgI	CCRYGG	1 cut(s)	956
BtsCI	GGATG	6 cut(s)	112, 430, 516, 794, 1060, 1066
Cac8I	GCNNGC	2 cut(s)	1106, 1203
CaiI	CAGNNNCTG	1 cut(s)	995
CciI	TCATGA	1 cut(s)	1150
CfoI	GCGC	1 cut(s)	22
Cfr13I	GGNCC	3 cut(s)	163, 1165, 1192
CseI	GACGC	2 cut(s)	350, 1218
CsiI	ACCWGGT	2 cut(s)	441, 1002
Csp6I	GTAC	3 cut(s)	334, 446, 541
CviAII	CATG	8 cut(s)	53, 94, 226, 248, 907, 957, 1151, 1202
CviQI	GTAC	3 cut(s)	334, 446, 541
DdeI	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
DinI	GGCGCC	1 cut(s)	21
DpnI	GATC	2 cut(s)	253, 548
DpnII	GATC	2 cut(s)	251, 546
DraI	TTTAAA	1 cut(s)	1144
DriI	GACNNNNNGTC	1 cut(s)	778
Eam1105I	GACNNNNNGTC	1 cut(s)	778
Eco130I	CCWWGG	1 cut(s)	956
Eco47I	GGWCC	2 cut(s)	1165, 1192
Eco88I	CYCGRG	1 cut(s)	77
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoRII	CCWGG	2 cut(s)	441, 1002
EcoT14I	CCWWGG	1 cut(s)	956
EcoT22I	ATGCAT	1 cut(s)	908
EgeI	GGCGCC	1 cut(s)	21
EheI	GGCGCC	1 cut(s)	21
ErhI	CCWWGG	1 cut(s)	956
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	8 cut(s)	56, 97, 229, 251, 910, 960, 1154, 1205
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	4 cut(s)	611, 1151, 1178, 1202
FatI	CATG	8 cut(s)	52, 93, 225, 247, 906, 956, 1150, 1201
FauI	CCCGC	1 cut(s)	1109
FblI	GTMKAC	2 cut(s)	758, 846
Fnu4HI	GCNGC	2 cut(s)	350, 577
FokI	GGATG	6 cut(s)	119, 437, 523, 801, 1053, 1067
Fsp4HI	GCNGC	2 cut(s)	350, 577
FspBI	CTAG	2 cut(s)	714, 1237
GlaI	GCGC	1 cut(s)	21
GluI	GCNGC	2 cut(s)	350, 577
GsuI	CTGGAG	1 cut(s)	972
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	1 cut(s)	165
HapII	CCGG	1 cut(s)	831
HgaI	GACGC	2 cut(s)	350, 1218
HhaI	GCGC	1 cut(s)	22
Hin1I	GRCGYC	2 cut(s)	20, 774
Hin1II	CATG	8 cut(s)	56, 97, 229, 251, 910, 960, 1154, 1205
Hin6I	GCGC	1 cut(s)	20
HinP1I	GCGC	1 cut(s)	20
HincII	GTYRAC	2 cut(s)	847, 1000
HindII	GTYRAC	2 cut(s)	847, 1000
HinfI	GANTC	2 cut(s)	625, 843
HpaII	CCGG	1 cut(s)	831
HphI	GGTGA	6 cut(s)	305, 563, 629, 634, 845, 944
Hpy166II	GTNNAC	4 cut(s)	759, 847, 1000, 1044
Hpy188I	TCNGA	1 cut(s)	1234
Hpy188III	TCNNGA	8 cut(s)	461, 596, 714, 989, 1011, 1052, 1088, 1151
Hpy8I	GTNNAC	4 cut(s)	759, 847, 1000, 1044
HpyAV	CCTTC	4 cut(s)	307, 626, 1133, 1153
HpyCH4III	ACNGT	5 cut(s)	130, 136, 301, 344, 469
HpyCH4IV	ACGT	3 cut(s)	539, 774, 1117
HpyCH4V	TGCA	8 cut(s)	322, 352, 579, 668, 906, 1021, 1044, 1205
HpyF10VI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
HpyF3I	CTNAG	5 cut(s)	231, 283, 753, 801, 1173
HpySE526I	ACGT	3 cut(s)	539, 774, 1117
Hsp92I	GRCGYC	2 cut(s)	20, 774
Hsp92II	CATG	8 cut(s)	56, 97, 229, 251, 910, 960, 1154, 1205
HspAI	GCGC	1 cut(s)	20
KasI	GGCGCC	1 cut(s)	19
KflI	GGGWCCC	1 cut(s)	1165
Kzo9I	GATC	2 cut(s)	251, 546
LmnI	GCTCC	1 cut(s)	746
Lsp1109I	GCAGC	2 cut(s)	336, 563
LweI	GCATC	2 cut(s)	501, 1045
MabI	ACCWGGT	2 cut(s)	441, 1002
MaeI	CTAG	2 cut(s)	714, 1237
MaeII	ACGT	3 cut(s)	539, 774, 1117
MaeIII	GTNAC	5 cut(s)	130, 175, 221, 653, 1088
MalI	GATC	2 cut(s)	253, 548
MboI	GATC	2 cut(s)	251, 546
MfeI	CAATTG	1 cut(s)	183
MflI	RGATCY	1 cut(s)	546
MhlI	GDGCHC	3 cut(s)	730, 881, 1046
MluCI	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
Mly113I	GGCGCC	1 cut(s)	20
MlyI	GAGTC	1 cut(s)	852
MmeI	TCCRAC	2 cut(s)	766, 908
MnlI	CCTC	8 cut(s)	73, 324, 527, 618, 886, 948, 996, 1168
Mph1103I	ATGCAT	1 cut(s)	908
MroXI	GAANNNNTTC	1 cut(s)	468
MseI	TTAA	5 cut(s)	483, 528, 603, 945, 1143
MslI	CAYNNNNRTG	2 cut(s)	378, 584
MspA1I	CMGCKG	1 cut(s)	576
MspI	CCGG	1 cut(s)	831
MspR9I	CCNGG	3 cut(s)	443, 831, 1004
MunI	CAATTG	1 cut(s)	183
MvaI	CCWGG	2 cut(s)	443, 1004
MwoI	GCNNNNNNNGC	3 cut(s)	358, 817, 1055
NarI	GGCGCC	1 cut(s)	20
NciI	CCSGG	1 cut(s)	831
NcoI	CCATGG	1 cut(s)	956
NdeII	GATC	2 cut(s)	251, 546
NlaIII	CATG	8 cut(s)	56, 97, 229, 251, 910, 960, 1154, 1205
NlaIV	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
NmuCI	GTSAC	3 cut(s)	175, 653, 1088
NsiI	ATGCAT	1 cut(s)	908
NspI	RCATGY	1 cut(s)	1205
PaeI	GCATGC	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	1150
PdmI	GAANNNNTTC	1 cut(s)	468
PfeI	GAWTC	1 cut(s)	625
PkrI	GCNGC	2 cut(s)	351, 578
PleI	GAGTC	1 cut(s)	851
PluTI	GGCGCC	1 cut(s)	23
PpsI	GAGTC	1 cut(s)	851
Ppu21I	YACGTR	1 cut(s)	540
PpuMI	RGGWCCY	1 cut(s)	1165
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	2 cut(s)	441, 1002
PspGI	CCWGG	2 cut(s)	441, 1002
PspN4I	GGNNCC	5 cut(s)	21, 154, 1166, 1167, 1194
PspPI	GGNCC	3 cut(s)	163, 1165, 1192
PspPPI	RGGWCCY	1 cut(s)	1165
PstNI	CAGNNNCTG	1 cut(s)	995
PsuI	RGATCY	1 cut(s)	546
RsaI	GTAC	3 cut(s)	335, 447, 542
RsaNI	GTAC	3 cut(s)	334, 446, 541
RseI	CAYNNNNRTG	2 cut(s)	378, 584
SalI	GTCGAC	1 cut(s)	845
SaqAI	TTAA	5 cut(s)	483, 528, 603, 945, 1143
SatI	GCNGC	2 cut(s)	350, 577
Sau3AI	GATC	2 cut(s)	251, 546
Sau96I	GGNCC	3 cut(s)	163, 1165, 1192
SchI	GAGTC	1 cut(s)	852
ScrFI	CCNGG	3 cut(s)	443, 831, 1004
SduI	GDGCHC	3 cut(s)	730, 881, 1046
SexAI	ACCWGGT	2 cut(s)	441, 1002
SfaNI	GCATC	2 cut(s)	501, 1045
SfcI	CTRYAG	1 cut(s)	762
SfoI	GGCGCC	1 cut(s)	21
SinI	GGWCC	2 cut(s)	1165, 1192
SmiMI	CAYNNNNRTG	2 cut(s)	378, 584
SmlI	CTYRAG	1 cut(s)	449
SmoI	CTYRAG	1 cut(s)	449
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
SsiI	CCGC	4 cut(s)	48, 574, 1039, 1102
SspDI	GGCGCC	1 cut(s)	19
SspMI	CTAG	2 cut(s)	714, 1237
StyD4I	CCNGG	3 cut(s)	441, 829, 1002
StyI	CCWWGG	1 cut(s)	956
TaaI	ACNGT	5 cut(s)	130, 136, 301, 344, 469
TaiI	ACGT	3 cut(s)	542, 777, 1120
TaqI	TCGA	2 cut(s)	846, 1077
TasI	AATT	8 cut(s)	99, 171, 183, 216, 932, 942, 1154, 1187
TfiI	GAWTC	1 cut(s)	625
Tru1I	TTAA	5 cut(s)	483, 528, 603, 945, 1143
Tru9I	TTAA	5 cut(s)	483, 528, 603, 945, 1143
TseFI	GTSAC	3 cut(s)	175, 653, 1088
TseI	GCWGC	2 cut(s)	349, 576
Tsp45I	GTSAC	3 cut(s)	175, 653, 1088
TspDTI	ATGAA	8 cut(s)	101, 110, 441, 461, 923, 1095, 1167, 1199
TspGWI	ACGGA	2 cut(s)	523, 938
VneI	GTGCAC	1 cut(s)	1042
VpaK11BI	GGWCC	2 cut(s)	1165, 1192
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	1 cut(s)	932
XbaI	TCTAGA	1 cut(s)	713
XceI	RCATGY	1 cut(s)	1205
XmiI	GTMKAC	2 cut(s)	758, 846
XmnI	GAANNNNTTC	1 cut(s)	468
XspI	CTAG	2 cut(s)	714, 1237
ZraI	GACGTC	1 cut(s)	775
Zsp2I	ATGCAT	1 cut(s)	908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.