Rh3AG283700

G3BP-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
33190661 .. 33193092
2432 bp
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UTR
Exon/CDS
Intron
Rh3AG283700.1

Sequence Viewer

Length: 606 bp
ATGTTAAAGCATATGGAGTGGAGGAGAAGAACTACACTAAGCACTGACAAAGCGAAAGAAACAATCATTACTAATACAAAAGACATATCAATGGTTTTGCTGCCACCCTTGAAGAGGAAGAGGCAGCTGAAATTGCAAAGCATCCAAATGTTGTCTCAGTTTCTTAAACCAAGAAAGAAATTGCATACAGCCCATTCATGGAGCCCATTCATAGAATTTCGTGCTACTGGAAAAGAACGGAGTGATTCGCCCCAGTGTGTGGCCCGAATCAGTGTGTTAGTGACAAAGGGATTTGACCCATTCCATCAATGTGGAAAGGAATCTGTCAGAATGATACCACTGGGTTTTCCTGCAACAGTGGCTAATTATATGATGAGTGGAGAAACTCATACTACAGACTACATGGTGCCTGATGTCAATGGAAATGCGAATTTTGTTGAGAAACCTATTGGAGAGCCCCTGAAGCAGACCTATGCTTCTATATTGCATTTTGCTAAAGGACAACCTGCATCATCTGTAGCTCCTTGGCATTCAGTTCACAAGAGTGCACCACTGGCTTCAGATTGGAATGACTTTTCAGCCCATTGCATCGTCCAATGCAGTTGA

Protein Analysis

201

Amino Acids

22.71

Weight (kDa)

9.7

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018170)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 514
AccB1I GGYRCC 1 cut(s) 406
AccB7I CCANNNNNTGG 1 cut(s) 259
AcsI RAATTY 2 cut(s) 215, 430
AcuI CTGAAG 2 cut(s) 482, 543
AfiI CCNNNNNNNGG 3 cut(s) 114, 198, 259
AgsI TTSAA 1 cut(s) 112
AleI CACNNNNGTG 1 cut(s) 543
AluBI AGCT 2 cut(s) 127, 521
AluI AGCT 2 cut(s) 127, 521
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 1 cut(s) 159
Alw44I GTGCAC 1 cut(s) 546
AoxI GGCC 1 cut(s) 261
ApaLI GTGCAC 1 cut(s) 546
ApeKI GCWGC 2 cut(s) 100, 124
ApoI RAATTY 2 cut(s) 215, 430
AspS9I GGNCC 1 cut(s) 262
BaeGI GKGCMC 1 cut(s) 550
BanI GGYRCC 1 cut(s) 406
BanII GRGCYC 2 cut(s) 206, 459
Bbv12I GWGCWC 1 cut(s) 550
BbvI GCAGC 2 cut(s) 87, 136
BccI CCATC 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 159
BfmI CTRYAG 2 cut(s) 393, 516
BfuAI ACCTGC 1 cut(s) 514
BisI GCNGC 2 cut(s) 101, 125
BlsI GCNGC 2 cut(s) 102, 126
BmgT120I GGNCC 1 cut(s) 262
BmiI GGNNCC 2 cut(s) 203, 408
BmrI ACTGGG 2 cut(s) 247, 350
BmsI GCATC 3 cut(s) 150, 518, 597
BmuI ACTGGG 2 cut(s) 247, 350
BsaJI CCNNGG 1 cut(s) 524
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 198, 259
Bse1I ACTGG 4 cut(s) 232, 253, 345, 558
Bse3DI GCAATG 1 cut(s) 583
BseDI CCNNGG 1 cut(s) 524
BseGI GGATG 1 cut(s) 141
BseLI CCNNNNNNNGG 3 cut(s) 114, 198, 259
BseMI GCAATG 1 cut(s) 583
BseMII CTCAG 1 cut(s) 170
BseNI ACTGG 4 cut(s) 232, 253, 345, 558
BseRI GAGGAG 1 cut(s) 37
BseSI GKGCMC 1 cut(s) 550
BseXI GCAGC 2 cut(s) 87, 136
BshFI GGCC 1 cut(s) 263
BshNI GGYRCC 1 cut(s) 406
BsiHKAI GWGCWC 1 cut(s) 550
BslI CCNNNNNNNGG 3 cut(s) 114, 198, 259
BsmAI GTCTC 1 cut(s) 159
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 1 cut(s) 263
Bsp1286I GDGCHC 3 cut(s) 206, 459, 550
BspANI GGCC 1 cut(s) 263
BspCNI CTCAG 1 cut(s) 169
BspLI GGNNCC 2 cut(s) 203, 408
BspMI ACCTGC 1 cut(s) 514
BspT107I GGYRCC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 583
BsrI ACTGG 4 cut(s) 232, 253, 345, 558
BssECI CCNNGG 1 cut(s) 524
BssT1I CCWWGG 1 cut(s) 524
Bst4CI ACNGT 1 cut(s) 358
Bst6I CTCTTC 2 cut(s) 107, 113
BstDEI CTNAG 2 cut(s) 38, 156
BstENI CCTNNNNNAGG 1 cut(s) 112
BstF5I GGATG 1 cut(s) 141
BstMAI GTCTC 1 cut(s) 159
BstMWI GCNNNNNNNGC 4 cut(s) 133, 359, 463, 554
BstSFI CTRYAG 2 cut(s) 393, 516
BstSLI GKGCMC 1 cut(s) 550
BstV1I GCAGC 2 cut(s) 87, 136
BstXI CCANNNNNNTGG 1 cut(s) 311
BsuRI GGCC 1 cut(s) 263
BtsCI GGATG 1 cut(s) 141
BtsIMutI CAGTG 6 cut(s) 42, 260, 277, 338, 363, 551
BveI ACCTGC 1 cut(s) 514
Cfr13I GGNCC 1 cut(s) 262
CviAII CATG 2 cut(s) 198, 403
CviJI RGCY 9 cut(s) 127, 191, 204, 263, 362, 457, 521, 557, 581
CviKI_1 RGCY 9 cut(s) 127, 191, 204, 263, 362, 457, 521, 557, 581
DdeI CTNAG 2 cut(s) 38, 156
Eam1104I CTCTTC 2 cut(s) 107, 113
EarI CTCTTC 2 cut(s) 107, 113
Eco130I CCWWGG 1 cut(s) 524
Eco24I GRGCYC 2 cut(s) 206, 459
Eco57I CTGAAG 2 cut(s) 482, 543
EcoNI CCTNNNNNAGG 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 524
EcoT38I GRGCYC 2 cut(s) 206, 459
ErhI CCWWGG 1 cut(s) 524
FaeI CATG 2 cut(s) 201, 406
FatI CATG 2 cut(s) 197, 402
FauNDI CATATG 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 101, 125
FokI GGATG 1 cut(s) 128
FriOI GRGCYC 2 cut(s) 206, 459
Fsp4HI GCNGC 2 cut(s) 101, 125
GluI GCNGC 2 cut(s) 101, 125
HaeIII GGCC 1 cut(s) 263
Hin1II CATG 2 cut(s) 201, 406
HinfI GANTC 3 cut(s) 245, 267, 320
Hpy166II GTNNAC 2 cut(s) 538, 548
Hpy188I TCNGA 2 cut(s) 329, 562
Hpy8I GTNNAC 2 cut(s) 538, 548
HpyCH4III ACNGT 1 cut(s) 358
HpyCH4V TGCA 8 cut(s) 136, 184, 353, 487, 509, 548, 588, 600
HpyF10VI GCNNNNNNNGC 4 cut(s) 133, 359, 463, 554
HpyF3I CTNAG 2 cut(s) 38, 156
Hsp92II CATG 2 cut(s) 201, 406
LmnI GCTCC 2 cut(s) 201, 526
LpnPI CCDG 8 cut(s) 213, 266, 326, 363, 423, 473, 519, 539
Lsp1109I GCAGC 2 cut(s) 87, 136
LweI GCATC 3 cut(s) 150, 518, 597
MaeIII GTNAC 1 cut(s) 280
MboII GAAGA 3 cut(s) 39, 124, 130
MhlI GDGCHC 3 cut(s) 206, 459, 550
MluCI AATT 5 cut(s) 131, 179, 215, 364, 430
MnlI CCTC 3 cut(s) 15, 108, 114
MseI TTAA 2 cut(s) 5, 165
MslI CAYNNNNRTG 4 cut(s) 89, 146, 309, 543
MspA1I CMGCKG 1 cut(s) 127
Mva1269I GAATGC 1 cut(s) 529
MwoI GCNNNNNNNGC 4 cut(s) 133, 359, 463, 554
NdeI CATATG 1 cut(s) 12
NlaIII CATG 2 cut(s) 201, 406
NlaIV GGNNCC 2 cut(s) 203, 408
NmuCI GTSAC 1 cut(s) 280
OliI CACNNNNGTG 1 cut(s) 543
PctI GAATGC 1 cut(s) 529
PfeI GAWTC 3 cut(s) 245, 267, 320
PflMI CCANNNNNTGG 1 cut(s) 259
PkrI GCNGC 2 cut(s) 102, 126
PspN4I GGNNCC 2 cut(s) 203, 408
PspPI GGNCC 1 cut(s) 262
PvuII CAGCTG 1 cut(s) 127
RseI CAYNNNNRTG 4 cut(s) 89, 146, 309, 543
SaqAI TTAA 2 cut(s) 5, 165
SatI GCNGC 2 cut(s) 101, 125
Sau96I GGNCC 1 cut(s) 262
SduI GDGCHC 3 cut(s) 206, 459, 550
SetI ASST 5 cut(s) 129, 448, 473, 508, 523
SfaNI GCATC 3 cut(s) 150, 518, 597
SfcI CTRYAG 2 cut(s) 393, 516
SmiMI CAYNNNNRTG 4 cut(s) 89, 146, 309, 543
Sse9I AATT 5 cut(s) 131, 179, 215, 364, 430
StyI CCWWGG 1 cut(s) 524
TaaI ACNGT 1 cut(s) 358
TasI AATT 5 cut(s) 131, 179, 215, 364, 430
TfiI GAWTC 3 cut(s) 245, 267, 320
Tru1I TTAA 2 cut(s) 5, 165
Tru9I TTAA 2 cut(s) 5, 165
TscAI CASTG 6 cut(s) 49, 260, 277, 345, 363, 558
TseFI GTSAC 1 cut(s) 280
TseI GCWGC 2 cut(s) 100, 124
Tsp45I GTSAC 1 cut(s) 280
TspDTI ATGAA 2 cut(s) 186, 199
TspGWI ACGGA 1 cut(s) 253
TspRI CASTG 6 cut(s) 49, 260, 277, 345, 363, 558
Van91I CCANNNNNTGG 1 cut(s) 259
VneI GTGCAC 1 cut(s) 546
XagI CCTNNNNNAGG 1 cut(s) 112
XapI RAATTY 2 cut(s) 215, 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.