Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0016359

Physical Location & Seq

Genomic Coordinates Forward (+)

4048024 .. 4049915

Gene Structure 1892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG059300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGCATCTAGGTAACACTCTAAAGCCCCTCCTCAACAAGCAACTCCCCTCTATAAATTGCAGCCTCTCCTCTCTCTTCCATCGCCAAGTCCCAGTGCAACCATCTCCTCTAGTAGAGCAAATCTTGTGCCTCCCAATTTCGATCTCATCCATGGCTTCTTTCCTTCAGTTTCTTCTCTTGTTCTCTTTATCCCTTCTTCTTGCTTTTGTGTCCGCGGATGATCAGTCATCTGAAACACAAACTCAACCTCGACCCCCAACGCCTATTATCAGGCCAACCAAGCTTGTTCTGAAGGTGCAGAAAGATGGTGCTACGAATCTCCATGTAGCCCAGATTTTCAAGAGAACCCCTCCAGTTCAACTCCCCTTTGTGGTAGACCTTAACGGGGAGTTCGTATCGGTCAATTGTGAGAACAAGTACTTATCATCGACTTTCAATGCTCCTATTTGCCACTCGGCCCAATGCTCTAGAGCCAACACCCACACATGCCGCACGTGCTCTCCCAAATCCCCCAGATACCCCATGGCTAGACCTGGCTGCCACGTCAATGCATGCGCGGTCACGGCTGTGAACCCGGTTACCCAACAAAGAGCCATAGGCGAGCTCGCGGAGGATGTGCTTTCGATCCCATCAACCCTAGGCTCAAGGCCAGGCCCAATGGTCACAATCCCTCAATTCCTCTTTGCATGTGCACCTTCTATCCTCTTGCAAAGAGGACTACCCCAAAACGTTCAAGGCATTGCTGGGATGGGCCACTCCCGAATTTCACTTCCATCCCAGCTTGCTTCCCAGTTCGGCATCCCACCGAAGATCGCCATCTGCCTCGCTTCTGGCTCGGGACAAAATGGTGTCATTTTCTTCGGCGAGGGGCCGTACATGATGCTACCGGGCATCGATGTGTCCCGCCAGCTCACCTACGCCCCACTATCCATAGGCCAACAAGGAGAGTACTTGATAAACGTCCAATCCATCCAAATCAACAACAATATCGTTCCACTCCCTCCAAAATTTCGTTCTAACCAAGCCATGCTCAGCACCACAACTCCTTACACAATCCTGCATCAGTCCATCTTCATAGCTCTCACTCAACTCTACATCAAGCAGTTCTCGGGAGTGCCTCAAGTGACCGCGGTGCCGCCGTTTGGGCTGTGTTTCGATGCAAACAAAATCAGTTACAGCAAGATGGGTCCGGCAGTACCTAGCATTCAGCTTGTGTTGGACAACCAGCAGAAGCTTCGGTGGACAATCTCTGGCCAAAATGTGATAGTTCAGGCGCGTCCGGGAGTTATGTGCTTGGCCATGGTGAACGGCGGGCCCAACCCTAAAACTCCGATCGTGATCGGGGGACACCAGATGGAGGATAACCTAGTGCAGCTGGATTTGGTGAACTCGAGGGTTGGCTTTAGCAACTCGTTGTTGTTCCAGAGGACCAACTGTGCCAACTTCAACTTCAACTTGAACTTCAACGCCAACACGACTGCTACTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005488 GO:0005515 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0042802 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

496

Amino Acids

53.76

Weight (kDa)

9.29

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	110 - 288	3.4e-32	Xylanase inhibitor N-terminal
TAXi_C	PF14541	316 - 469	2.9e-45	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016359)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g05510
malus_domestica	MD04G1208100.v1.1 MD12G1222100.v1.1
prunus_persica	Prupe.6G329000_v2.0.a1
pyrus_communis	pycom12g20830
rosa_chinensis	RchiOBHm_Chr3g0454271
rosa_laevigata	RLG00000025468
rosa_roxburghii	Rroxscaffold_165G00437090 Rroxscaffold_6G00425250
rosa_rugosa	Rorug02G0653800
rosa_samantha	Rh3AG057600 Rh3BG059300 Rh3CG058500 Rh3DG059800
rosa_wichuraiana	Rw3G004420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1132
AccI	GTMKAC	1 cut(s)	375
AccII	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
AclI	AACGTT	1 cut(s)	729
AclWI	GGATC	1 cut(s)	619
AcoI	YGGCCR	2 cut(s)	1252, 1296
AcsI	RAATTY	2 cut(s)	762, 1007
AcuI	CTGAAG	2 cut(s)	149, 311
AcvI	CACGTG	1 cut(s)	495
AfaI	GTAC	4 cut(s)	419, 875, 950, 1197
AfiI	CCNNNNNNNGG	4 cut(s)	370, 385, 1142, 1357
AgsI	TTSAA	8 cut(s)	340, 359, 436, 734, 1447, 1453, 1459, 1465
AjiI	CACGTC	1 cut(s)	544
AjnI	CCWGG	2 cut(s)	532, 649
AjuI	GAANNNNNNNTTGG	4 cut(s)	997, 1029, 1433, 1465
AleI	CACNNNNGTG	1 cut(s)	566
AluBI	AGCT	8 cut(s)	283, 604, 781, 910, 1079, 1210, 1234, 1375
AluI	AGCT	8 cut(s)	283, 604, 781, 910, 1079, 1210, 1234, 1375
Alw21I	GWGCWC	3 cut(s)	500, 606, 694
Alw44I	GTGCAC	1 cut(s)	690
AlwI	GGATC	1 cut(s)	619
Ama87I	CYCGRG	3 cut(s)	835, 1108, 1390
ApaI	GGGCCC	1 cut(s)	1317
ApaLI	GTGCAC	1 cut(s)	690
ApeKI	GCWGC	3 cut(s)	60, 537, 1372
ApoI	RAATTY	2 cut(s)	762, 1007
AspA2I	CCTAGG	1 cut(s)	637
AspLEI	GCGC	2 cut(s)	557, 1276
AspS9I	GGNCC	8 cut(s)	457, 653, 751, 869, 1187, 1313, 1314, 1428
AsuC2I	CCSGG	3 cut(s)	575, 888, 1281
AsuHPI	GGTGA	3 cut(s)	904, 1315, 1396
AvaI	CYCGRG	3 cut(s)	835, 1108, 1390
AvaII	GGWCC	2 cut(s)	1187, 1428
AvrII	CCTAGG	1 cut(s)	637
BaeGI	GKGCMC	2 cut(s)	694, 1317
BalI	TGGCCA	2 cut(s)	1254, 1298
BanI	GGYRCC	1 cut(s)	1132
BanII	GRGCYC	2 cut(s)	606, 1317
BbrPI	CACGTG	1 cut(s)	495
Bbv12I	GWGCWC	3 cut(s)	500, 606, 694
BbvI	GCAGC	3 cut(s)	72, 524, 1384
BceAI	ACGGC	4 cut(s)	579, 856, 1123, 1324
BcgI	CGANNNNNNTGC	2 cut(s)	1217, 1251
BciT130I	CCWGG	2 cut(s)	534, 651
BclI	TGATCA	1 cut(s)	220
BcnI	CCSGG	3 cut(s)	575, 888, 1281
BfaI	CTAG	7 cut(s)	8, 110, 468, 528, 638, 1200, 1367
BglI	GCCNNNNNGGC	1 cut(s)	1144
BisI	GCNGC	5 cut(s)	61, 490, 538, 1136, 1373
BlnI	CCTAGG	1 cut(s)	637
BlpI	GCTNAGC	1 cut(s)	1031
BlsI	GCNGC	5 cut(s)	62, 491, 539, 1137, 1374
BmcAI	AGTACT	2 cut(s)	419, 950
Bme1390I	CCNGG	5 cut(s)	534, 575, 651, 888, 1281
Bme18I	GGWCC	2 cut(s)	1187, 1428
BmeT110I	CYCGRG	3 cut(s)	835, 1108, 1390
BmgBI	CACGTC	1 cut(s)	544
BmgT120I	GGNCC	8 cut(s)	457, 653, 751, 869, 1187, 1313, 1314, 1428
BmiI	GGNNCC	4 cut(s)	870, 1134, 1188, 1315
BmrFI	CCNGG	5 cut(s)	534, 575, 651, 888, 1281
BmrI	ACTGGG	2 cut(s)	86, 784
BmsI	GCATC	6 cut(s)	13, 807, 870, 900, 1069, 1147
BmuI	ACTGGG	2 cut(s)	86, 784
BplI	GAGNNNNNCTC	2 cut(s)	334, 366
BpmI	CTGGAG	1 cut(s)	336
Bpu1102I	GCTNAGC	1 cut(s)	1031
BpuEI	CTTGAG	2 cut(s)	628, 1104
BpuMI	CCSGG	3 cut(s)	575, 888, 1281
Bsa29I	ATCGAT	1 cut(s)	894
BsaAI	YACGTR	1 cut(s)	495
BsaBI	GATNNNNATC	2 cut(s)	815, 1337
BsaJI	CCNNGG	6 cut(s)	150, 213, 522, 637, 1128, 1299
BsaXI	ACNNNNNCTCC	5 cut(s)	484, 514, 1027, 1057, 1468
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 385, 1142, 1357
Bse1I	ACTGG	3 cut(s)	92, 353, 790
Bse3DI	GCAATG	1 cut(s)	738
Bse8I	GATNNNNATC	2 cut(s)	815, 1337
BseBI	CCWGG	2 cut(s)	534, 651
BseCI	ATCGAT	1 cut(s)	894
BseDI	CCNNGG	6 cut(s)	150, 213, 522, 637, 1128, 1299
BseGI	GGATG	7 cut(s)	146, 223, 619, 753, 773, 798, 969
BseJI	GATNNNNATC	2 cut(s)	815, 1337
BseLI	CCNNNNNNNGG	4 cut(s)	370, 385, 1142, 1357
BseMI	GCAATG	1 cut(s)	738
BseMII	CTCAG	1 cut(s)	1045
BseNI	ACTGG	3 cut(s)	92, 353, 790
BseRI	GAGGAG	3 cut(s)	20, 58, 96
BseSI	GKGCMC	2 cut(s)	694, 1317
BseXI	GCAGC	3 cut(s)	72, 524, 1384
BseYI	CCCAGC	2 cut(s)	743, 777
BsgI	GTGCAG	2 cut(s)	317, 1391
Bsh1236I	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
Bsh1285I	CGRYCG	1 cut(s)	1335
BshNI	GGYRCC	1 cut(s)	1132
BshVI	ATCGAT	1 cut(s)	894
BsiEI	CGRYCG	1 cut(s)	1335
BsiHKAI	GWGCWC	3 cut(s)	500, 606, 694
BsiHKCI	CYCGRG	3 cut(s)	835, 1108, 1390
BsiSI	CCGG	4 cut(s)	575, 887, 1190, 1280
BslFI	GGGAC	4 cut(s)	74, 852, 886, 1359
BslI	CCNNNNNNNGG	4 cut(s)	370, 385, 1142, 1357
BsmFI	GGGAC	4 cut(s)	74, 852, 886, 1359
BsmI	GAATGC	1 cut(s)	1203
BsoBI	CYCGRG	3 cut(s)	835, 1108, 1390
Bsp120I	GGGCCC	1 cut(s)	1313
Bsp1286I	GDGCHC	4 cut(s)	500, 606, 694, 1317
Bsp143I	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
Bsp1720I	GCTNAGC	1 cut(s)	1031
Bsp19I	CCATGG	3 cut(s)	150, 522, 1299
BspCNI	CTCAG	1 cut(s)	1044
BspDI	ATCGAT	1 cut(s)	894
BspFNI	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
BspLI	GGNNCC	4 cut(s)	870, 1134, 1188, 1315
BspPI	GGATC	1 cut(s)	619
BspT107I	GGYRCC	1 cut(s)	1132
BsrDI	GCAATG	1 cut(s)	738
BsrI	ACTGG	3 cut(s)	92, 353, 790
BssECI	CCNNGG	6 cut(s)	150, 213, 522, 637, 1128, 1299
BssMI	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
BssT1I	CCWWGG	4 cut(s)	150, 522, 637, 1299
Bst2UI	CCWGG	2 cut(s)	534, 651
Bst4CI	ACNGT	1 cut(s)	1436
Bst6I	CTCTTC	1 cut(s)	80
BstBAI	YACGTR	1 cut(s)	495
BstC8I	GCNNGC	6 cut(s)	553, 602, 606, 783, 908, 1313
BstDEI	CTNAG	1 cut(s)	1031
BstDSI	CCRYGG	5 cut(s)	150, 213, 522, 1128, 1299
BstEII	GGTNACC	1 cut(s)	577
BstF5I	GGATG	7 cut(s)	146, 223, 619, 753, 773, 798, 969
BstFNI	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
BstHHI	GCGC	2 cut(s)	557, 1276
BstKTI	GATC	6 cut(s)	144, 223, 627, 813, 1335, 1341
BstMBI	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
BstMCI	CGRYCG	1 cut(s)	1335
BstMWI	GCNNNNNNNGC	4 cut(s)	280, 495, 563, 1144
BstNI	CCWGG	2 cut(s)	534, 651
BstNSI	RCATGY	3 cut(s)	489, 555, 690
BstPI	GGTNACC	1 cut(s)	577
BstSCI	CCNGG	5 cut(s)	532, 573, 649, 886, 1279
BstSLI	GKGCMC	2 cut(s)	694, 1317
BstUI	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
BstV1I	GCAGC	3 cut(s)	72, 524, 1384
Bsu15I	ATCGAT	1 cut(s)	894
BsuTUI	ATCGAT	1 cut(s)	894
BtgI	CCRYGG	5 cut(s)	150, 213, 522, 1128, 1299
BtgZI	GCGATG	1 cut(s)	65
BtrI	CACGTC	1 cut(s)	544
BtsCI	GGATG	7 cut(s)	146, 223, 619, 753, 773, 798, 969
BtsIMutI	CAGTG	1 cut(s)	99
Cac8I	GCNNGC	6 cut(s)	553, 602, 606, 783, 908, 1313
CfoI	GCGC	2 cut(s)	557, 1276
Cfr13I	GGNCC	8 cut(s)	457, 653, 751, 869, 1187, 1313, 1314, 1428
Cfr42I	CCGCGG	2 cut(s)	216, 1131
ClaI	ATCGAT	1 cut(s)	894
CseI	GACGC	1 cut(s)	1265
Csp6I	GTAC	4 cut(s)	418, 874, 949, 1196
CviAII	CATG	9 cut(s)	151, 323, 486, 523, 552, 687, 877, 1027, 1300
CviQI	GTAC	4 cut(s)	418, 874, 949, 1196
DdeI	CTNAG	1 cut(s)	1031
DpnI	GATC	6 cut(s)	143, 222, 626, 812, 1334, 1340
DpnII	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
EaeI	YGGCCR	2 cut(s)	1252, 1296
Eam1104I	CTCTTC	1 cut(s)	80
EarI	CTCTTC	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	604
Eco130I	CCWWGG	4 cut(s)	150, 522, 637, 1299
Eco24I	GRGCYC	2 cut(s)	606, 1317
Eco47I	GGWCC	2 cut(s)	1187, 1428
Eco53kI	GAGCTC	1 cut(s)	604
Eco57I	CTGAAG	2 cut(s)	149, 311
Eco72I	CACGTG	1 cut(s)	495
Eco88I	CYCGRG	3 cut(s)	835, 1108, 1390
Eco91I	GGTNACC	1 cut(s)	577
EcoICRI	GAGCTC	1 cut(s)	604
EcoO65I	GGTNACC	1 cut(s)	577
EcoRII	CCWGG	2 cut(s)	532, 649
EcoT14I	CCWWGG	4 cut(s)	150, 522, 637, 1299
EcoT22I	ATGCAT	2 cut(s)	6, 553
EcoT38I	GRGCYC	2 cut(s)	606, 1317
ErhI	CCWWGG	4 cut(s)	150, 522, 637, 1299
FaeI	CATG	9 cut(s)	154, 326, 489, 526, 555, 690, 880, 1030, 1303
FaqI	GGGAC	4 cut(s)	74, 852, 886, 1359
FatI	CATG	9 cut(s)	150, 322, 485, 522, 551, 686, 876, 1026, 1299
FauI	CCCGC	2 cut(s)	911, 1304
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	375
Fnu4HI	GCNGC	5 cut(s)	61, 490, 538, 1136, 1373
FokI	GGATG	7 cut(s)	133, 230, 626, 760, 760, 785, 956
FriOI	GRGCYC	2 cut(s)	606, 1317
Fsp4HI	GCNGC	5 cut(s)	61, 490, 538, 1136, 1373
FspBI	CTAG	7 cut(s)	8, 110, 468, 528, 638, 1200, 1367
GlaI	GCGC	2 cut(s)	556, 1275
GluI	GCNGC	5 cut(s)	61, 490, 538, 1136, 1373
GsaI	CCCAGC	2 cut(s)	747, 781
GsuI	CTGGAG	1 cut(s)	336
HapII	CCGG	4 cut(s)	575, 887, 1190, 1280
HgaI	GACGC	1 cut(s)	1265
HhaI	GCGC	2 cut(s)	557, 1276
Hin1II	CATG	9 cut(s)	154, 326, 489, 526, 555, 690, 880, 1030, 1303
Hin6I	GCGC	2 cut(s)	555, 1274
HinP1I	GCGC	2 cut(s)	555, 1274
HindIII	AAGCTT	2 cut(s)	281, 1232
HinfI	GANTC	1 cut(s)	316
HpaII	CCGG	4 cut(s)	575, 887, 1190, 1280
HphI	GGTGA	3 cut(s)	904, 1315, 1396
Hpy166II	GTNNAC	6 cut(s)	376, 571, 692, 1242, 1306, 1387
Hpy188I	TCNGA	3 cut(s)	232, 291, 1332
Hpy188III	TCNNGA	7 cut(s)	340, 468, 759, 837, 1110, 1336, 1423
Hpy8I	GTNNAC	6 cut(s)	376, 571, 692, 1242, 1306, 1387
HpyAV	CCTTC	4 cut(s)	173, 203, 286, 705
HpyCH4III	ACNGT	1 cut(s)	1436
HpyCH4IV	ACGT	4 cut(s)	494, 543, 729, 960
HpyF10VI	GCNNNNNNNGC	4 cut(s)	280, 495, 563, 1144
HpyF3I	CTNAG	1 cut(s)	1031
HpySE526I	ACGT	4 cut(s)	494, 543, 729, 960
Hsp92II	CATG	9 cut(s)	154, 326, 489, 526, 555, 690, 880, 1030, 1303
HspAI	GCGC	2 cut(s)	555, 1274
Ksp22I	TGATCA	1 cut(s)	220
KspI	CCGCGG	2 cut(s)	216, 1131
Kzo9I	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
LmnI	GCTCC	1 cut(s)	445
Lsp1109I	GCAGC	3 cut(s)	72, 524, 1384
LweI	GCATC	6 cut(s)	13, 807, 870, 900, 1069, 1147
MaeI	CTAG	7 cut(s)	8, 110, 468, 528, 638, 1200, 1367
MaeII	ACGT	4 cut(s)	494, 543, 729, 960
MaeIII	GTNAC	6 cut(s)	11, 559, 577, 661, 1123, 1172
MalI	GATC	6 cut(s)	143, 222, 626, 812, 1334, 1340
MboI	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
MboII	GAAGA	6 cut(s)	67, 164, 188, 820, 850, 1063
MfeI	CAATTG	1 cut(s)	403
MhlI	GDGCHC	4 cut(s)	500, 606, 694, 1317
MlsI	TGGCCA	2 cut(s)	1254, 1298
MluCI	AATT	6 cut(s)	55, 135, 403, 674, 762, 1007
MluNI	TGGCCA	2 cut(s)	1254, 1298
MmeI	TCCRAC	1 cut(s)	1197
Mox20I	TGGCCA	2 cut(s)	1254, 1298
Mph1103I	ATGCAT	2 cut(s)	6, 553
MscI	TGGCCA	2 cut(s)	1254, 1298
MseI	TTAA	1 cut(s)	381
MslI	CAYNNNNRTG	3 cut(s)	546, 566, 896
Msp20I	TGGCCA	2 cut(s)	1254, 1298
MspA1I	CMGCKG	3 cut(s)	215, 1130, 1375
MspI	CCGG	4 cut(s)	575, 887, 1190, 1280
MspR9I	CCNGG	5 cut(s)	534, 575, 651, 888, 1281
MunI	CAATTG	1 cut(s)	403
Mva1269I	GAATGC	1 cut(s)	1203
MvaI	CCWGG	2 cut(s)	534, 651
MvnI	CGCG	5 cut(s)	215, 557, 608, 1130, 1276
MwoI	GCNNNNNNNGC	4 cut(s)	280, 495, 563, 1144
NciI	CCSGG	3 cut(s)	575, 888, 1281
NcoI	CCATGG	3 cut(s)	150, 522, 1299
NdeII	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
NlaIII	CATG	9 cut(s)	154, 326, 489, 526, 555, 690, 880, 1030, 1303
NlaIV	GGNNCC	4 cut(s)	870, 1134, 1188, 1315
NmeAIII	GCCGAG	1 cut(s)	434
NmuCI	GTSAC	3 cut(s)	559, 661, 1123
NsiI	ATGCAT	2 cut(s)	6, 553
NspI	RCATGY	3 cut(s)	489, 555, 690
OliI	CACNNNNGTG	1 cut(s)	566
PaeI	GCATGC	1 cut(s)	555
PaeR7I	CTCGAG	1 cut(s)	1390
PcsI	WCGNNNNNNNCGW	1 cut(s)	390
PctI	GAATGC	1 cut(s)	1203
PfeI	GAWTC	1 cut(s)	316
PfoI	TCCNGGA	1 cut(s)	1279
PkrI	GCNGC	5 cut(s)	62, 491, 539, 1137, 1374
Ple19I	CGATCG	1 cut(s)	1335
PmaCI	CACGTG	1 cut(s)	495
PmlI	CACGTG	1 cut(s)	495
Ppu21I	YACGTR	1 cut(s)	495
Psp124BI	GAGCTC	1 cut(s)	606
Psp1406I	AACGTT	1 cut(s)	729
Psp6I	CCWGG	2 cut(s)	532, 649
PspCI	CACGTG	1 cut(s)	495
PspEI	GGTNACC	1 cut(s)	577
PspFI	CCCAGC	2 cut(s)	743, 777
PspGI	CCWGG	2 cut(s)	532, 649
PspN4I	GGNNCC	4 cut(s)	870, 1134, 1188, 1315
PspOMI	GGGCCC	1 cut(s)	1313
PspPI	GGNCC	8 cut(s)	457, 653, 751, 869, 1187, 1313, 1314, 1428
PspXI	VCTCGAGB	1 cut(s)	1390
PvuI	CGATCG	1 cut(s)	1335
PvuII	CAGCTG	1 cut(s)	1375
RsaI	GTAC	4 cut(s)	419, 875, 950, 1197
RsaNI	GTAC	4 cut(s)	418, 874, 949, 1196
RseI	CAYNNNNRTG	3 cut(s)	546, 566, 896
SacI	GAGCTC	1 cut(s)	606
SacII	CCGCGG	2 cut(s)	216, 1131
SaqAI	TTAA	1 cut(s)	381
SatI	GCNGC	5 cut(s)	61, 490, 538, 1136, 1373
Sau3AI	GATC	6 cut(s)	141, 220, 624, 810, 1332, 1338
Sau96I	GGNCC	8 cut(s)	457, 653, 751, 869, 1187, 1313, 1314, 1428
ScaI	AGTACT	2 cut(s)	419, 950
ScrFI	CCNGG	5 cut(s)	534, 575, 651, 888, 1281
SduI	GDGCHC	4 cut(s)	500, 606, 694, 1317
SfaNI	GCATC	6 cut(s)	13, 807, 870, 900, 1069, 1147
Sfr274I	CTCGAG	1 cut(s)	1390
Sfr303I	CCGCGG	2 cut(s)	216, 1131
SgrBI	CCGCGG	2 cut(s)	216, 1131
SinI	GGWCC	2 cut(s)	1187, 1428
SlaI	CTCGAG	1 cut(s)	1390
SmiMI	CAYNNNNRTG	3 cut(s)	546, 566, 896
SmlI	CTYRAG	3 cut(s)	643, 1119, 1390
SmoI	CTYRAG	3 cut(s)	643, 1119, 1390
SphI	GCATGC	1 cut(s)	555
Sse9I	AATT	6 cut(s)	55, 135, 403, 674, 762, 1007
SspMI	CTAG	7 cut(s)	8, 110, 468, 528, 638, 1200, 1367
SstI	GAGCTC	1 cut(s)	606
StyD4I	CCNGG	5 cut(s)	532, 573, 649, 886, 1279
StyI	CCWWGG	4 cut(s)	150, 522, 637, 1299
TaaI	ACNGT	1 cut(s)	1436
TaiI	ACGT	4 cut(s)	497, 546, 732, 963
TaqI	TCGA	7 cut(s)	140, 250, 428, 623, 894, 1155, 1391
TaqII	GACCGA	1 cut(s)	388
TasI	AATT	6 cut(s)	55, 135, 403, 674, 762, 1007
TatI	WGTACW	2 cut(s)	417, 948
TauI	GCSGC	2 cut(s)	492, 1138
TfiI	GAWTC	1 cut(s)	316
Tru1I	TTAA	1 cut(s)	381
Tru9I	TTAA	1 cut(s)	381
TscAI	CASTG	1 cut(s)	99
TseFI	GTSAC	3 cut(s)	559, 661, 1123
TseI	GCWGC	3 cut(s)	60, 537, 1372
Tsp45I	GTSAC	3 cut(s)	559, 661, 1123
TspDTI	ATGAA	1 cut(s)	1063
TspRI	CASTG	1 cut(s)	99
VneI	GTGCAC	1 cut(s)	690
VpaK11BI	GGWCC	2 cut(s)	1187, 1428
XapI	RAATTY	2 cut(s)	762, 1007
XbaI	TCTAGA	1 cut(s)	467
XceI	RCATGY	3 cut(s)	489, 555, 690
XcmI	CCANNNNNNNNNTGG	1 cut(s)	520
XhoI	CTCGAG	1 cut(s)	1390
XmaJI	CCTAGG	1 cut(s)	637
XmiI	GTMKAC	1 cut(s)	375
XspI	CTAG	7 cut(s)	8, 110, 468, 528, 638, 1200, 1367
ZrmI	AGTACT	2 cut(s)	419, 950
Zsp2I	ATGCAT	2 cut(s)	6, 553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.