No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0460231 |
| rosa_laevigata | RLG00000025034 |
| rosa_roxburghii | Rroxscaffold_6G00419730 |
| rosa_samantha | Rh3BG101900 Rh3BG102000 Rh3CG104000 Rh3DG103200 |
| rosa_wichuraiana | Rw3G008350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 99, 244 |
| AfaI | GTAC | 1 cut(s) | 209 |
| AgsI | TTSAA | 1 cut(s) | 26 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 227 |
| AluBI | AGCT | 1 cut(s) | 129 |
| AluI | AGCT | 1 cut(s) | 129 |
| Alw26I | GTCTC | 1 cut(s) | 214 |
| ApoI | RAATTY | 2 cut(s) | 99, 244 |
| AsuHPI | GGTGA | 1 cut(s) | 129 |
| AsuII | TTCGAA | 1 cut(s) | 110 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 191, 223 |
| BcoDI | GTCTC | 1 cut(s) | 214 |
| BfaI | CTAG | 1 cut(s) | 78 |
| BglII | AGATCT | 1 cut(s) | 154 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 227 |
| BmrI | ACTGGG | 1 cut(s) | 58 |
| BmsI | GCATC | 3 cut(s) | 23, 153, 286 |
| BmuI | ACTGGG | 1 cut(s) | 58 |
| Bpu14I | TTCGAA | 1 cut(s) | 110 |
| Bse1I | ACTGG | 1 cut(s) | 53 |
| BseGI | GGATG | 5 cut(s) | 14, 46, 58, 168, 298 |
| BseMII | CTCAG | 1 cut(s) | 149 |
| BseNI | ACTGG | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 214 |
| BsmI | GAATGC | 1 cut(s) | 118 |
| Bsp119I | TTCGAA | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 150 |
| BspT104I | TTCGAA | 1 cut(s) | 110 |
| BsrI | ACTGG | 1 cut(s) | 53 |
| BssMI | GATC | 1 cut(s) | 154 |
| Bst4CI | ACNGT | 3 cut(s) | 229, 271, 289 |
| Bst6I | CTCTTC | 2 cut(s) | 21, 198 |
| BstBI | TTCGAA | 1 cut(s) | 110 |
| BstDEI | CTNAG | 2 cut(s) | 158, 300 |
| BstF5I | GGATG | 5 cut(s) | 14, 46, 58, 168, 298 |
| BstKTI | GATC | 1 cut(s) | 157 |
| BstMAI | GTCTC | 1 cut(s) | 214 |
| BstMBI | GATC | 1 cut(s) | 154 |
| BstNSI | RCATGY | 1 cut(s) | 95 |
| BstX2I | RGATCY | 1 cut(s) | 154 |
| BstYI | RGATCY | 1 cut(s) | 154 |
| BtsCI | GGATG | 5 cut(s) | 14, 46, 58, 168, 298 |
| BtsIMutI | CAGTG | 1 cut(s) | 294 |
| Csp6I | GTAC | 1 cut(s) | 208 |
| CviAII | CATG | 3 cut(s) | 19, 92, 177 |
| CviJI | RGCY | 2 cut(s) | 129, 239 |
| CviKI_1 | RGCY | 2 cut(s) | 129, 239 |
| CviQI | GTAC | 1 cut(s) | 208 |
| DdeI | CTNAG | 2 cut(s) | 158, 300 |
| DpnI | GATC | 1 cut(s) | 156 |
| DpnII | GATC | 1 cut(s) | 154 |
| DriI | GACNNNNNGTC | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 2 cut(s) | 21, 198 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 227 |
| EarI | CTCTTC | 2 cut(s) | 21, 198 |
| EcoT22I | ATGCAT | 1 cut(s) | 118 |
| FaeI | CATG | 3 cut(s) | 22, 95, 180 |
| FaiI | YATR | 5 cut(s) | 20, 93, 178, 242, 252 |
| FatI | CATG | 3 cut(s) | 18, 91, 176 |
| FokI | GGATG | 3 cut(s) | 53, 65, 175 |
| FspBI | CTAG | 1 cut(s) | 78 |
| Hin1II | CATG | 3 cut(s) | 22, 95, 180 |
| HindIII | AAGCTT | 1 cut(s) | 127 |
| HinfI | GANTC | 1 cut(s) | 277 |
| HphI | GGTGA | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 1 cut(s) | 159 |
| Hpy188III | TCNNGA | 2 cut(s) | 78, 281 |
| HpyAV | CCTTC | 2 cut(s) | 117, 193 |
| HpyCH4III | ACNGT | 3 cut(s) | 229, 271, 289 |
| HpyCH4V | TGCA | 2 cut(s) | 116, 166 |
| HpyF3I | CTNAG | 2 cut(s) | 158, 300 |
| Hsp92II | CATG | 3 cut(s) | 22, 95, 180 |
| Kzo9I | GATC | 1 cut(s) | 154 |
| LmnI | GCTCC | 1 cut(s) | 147 |
| LpnPI | CCDG | 2 cut(s) | 34, 294 |
| LweI | GCATC | 3 cut(s) | 23, 153, 286 |
| MaeI | CTAG | 1 cut(s) | 78 |
| MalI | GATC | 1 cut(s) | 156 |
| MboI | GATC | 1 cut(s) | 154 |
| MboII | GAAGA | 3 cut(s) | 38, 208, 215 |
| MflI | RGATCY | 1 cut(s) | 154 |
| MluCI | AATT | 3 cut(s) | 32, 99, 244 |
| MnlI | CCTC | 4 cut(s) | 71, 145, 153, 186 |
| Mph1103I | ATGCAT | 1 cut(s) | 118 |
| MslI | CAYNNNNRTG | 1 cut(s) | 142 |
| Mva1269I | GAATGC | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 154 |
| NlaIII | CATG | 3 cut(s) | 22, 95, 180 |
| NsiI | ATGCAT | 1 cut(s) | 118 |
| NspI | RCATGY | 1 cut(s) | 95 |
| NspV | TTCGAA | 1 cut(s) | 110 |
| PctI | GAATGC | 1 cut(s) | 118 |
| PfeI | GAWTC | 1 cut(s) | 277 |
| PsuI | RGATCY | 1 cut(s) | 154 |
| RsaI | GTAC | 1 cut(s) | 209 |
| RsaNI | GTAC | 1 cut(s) | 208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 142 |
| Sau3AI | GATC | 1 cut(s) | 154 |
| SetI | ASST | 2 cut(s) | 63, 131 |
| SfaNI | GCATC | 3 cut(s) | 23, 153, 286 |
| SfuI | TTCGAA | 1 cut(s) | 110 |
| SgeI | CNNG | 8 cut(s) | 31, 35, 61, 90, 104, 135, 189, 293 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 142 |
| Sse9I | AATT | 3 cut(s) | 32, 99, 244 |
| SspMI | CTAG | 1 cut(s) | 78 |
| TaaI | ACNGT | 3 cut(s) | 229, 271, 289 |
| TaqI | TCGA | 1 cut(s) | 110 |
| TasI | AATT | 3 cut(s) | 32, 99, 244 |
| TfiI | GAWTC | 1 cut(s) | 277 |
| TscAI | CASTG | 1 cut(s) | 294 |
| TspDTI | ATGAA | 2 cut(s) | 69, 257 |
| TspGWI | ACGGA | 1 cut(s) | 53 |
| TspRI | CASTG | 1 cut(s) | 294 |
| XapI | RAATTY | 2 cut(s) | 99, 244 |
| XbaI | TCTAGA | 1 cut(s) | 77 |
| XceI | RCATGY | 1 cut(s) | 95 |
| XspI | CTAG | 1 cut(s) | 78 |
| Zsp2I | ATGCAT | 1 cut(s) | 118 |