No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0460231 |
| rosa_laevigata | RLG00000025034 |
| rosa_roxburghii | Rroxscaffold_6G00419730 |
| rosa_samantha | Rh3BG101900 Rh3BG102000 Rh3CG104000 Rh3DG103200 |
| rosa_wichuraiana | Rw3G008350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 299 |
| AfaI | GTAC | 1 cut(s) | 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 271 |
| AgsI | TTSAA | 3 cut(s) | 33, 94, 200 |
| AluBI | AGCT | 2 cut(s) | 116, 256 |
| AluI | AGCT | 2 cut(s) | 116, 256 |
| AlwI | GGATC | 1 cut(s) | 299 |
| AoxI | GGCC | 1 cut(s) | 273 |
| ApeKI | GCWGC | 1 cut(s) | 116 |
| BaeGI | GKGCMC | 1 cut(s) | 86 |
| BbvI | GCAGC | 1 cut(s) | 103 |
| BccI | CCATC | 1 cut(s) | 166 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BisI | GCNGC | 1 cut(s) | 117 |
| BlsI | GCNGC | 1 cut(s) | 118 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseMII | CTCAG | 1 cut(s) | 243 |
| BseRI | GAGGAG | 1 cut(s) | 26 |
| BseSI | GKGCMC | 1 cut(s) | 86 |
| BseXI | GCAGC | 1 cut(s) | 103 |
| BshFI | GGCC | 1 cut(s) | 275 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BsnI | GGCC | 1 cut(s) | 275 |
| Bsp1286I | GDGCHC | 1 cut(s) | 86 |
| Bsp143I | GATC | 1 cut(s) | 304 |
| BspANI | GGCC | 1 cut(s) | 275 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| BspPI | GGATC | 1 cut(s) | 299 |
| BssMI | GATC | 1 cut(s) | 304 |
| Bst4CI | ACNGT | 1 cut(s) | 77 |
| Bst6I | CTCTTC | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstDEI | CTNAG | 1 cut(s) | 252 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 269 |
| BstKTI | GATC | 1 cut(s) | 307 |
| BstMBI | GATC | 1 cut(s) | 304 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BstSLI | GKGCMC | 1 cut(s) | 86 |
| BstV1I | GCAGC | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 275 |
| BtsIMutI | CAGTG | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| Csp6I | GTAC | 1 cut(s) | 137 |
| CviJI | RGCY | 3 cut(s) | 116, 256, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 116, 256, 275 |
| CviQI | GTAC | 1 cut(s) | 137 |
| DdeI | CTNAG | 1 cut(s) | 252 |
| DpnI | GATC | 1 cut(s) | 306 |
| DpnII | GATC | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 1 cut(s) | 3 |
| EarI | CTCTTC | 1 cut(s) | 3 |
| Eco147I | AGGCCT | 1 cut(s) | 275 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 269 |
| FaiI | YATR | 8 cut(s) | 23, 71, 113, 131, 164, 188, 209, 279 |
| Fnu4HI | GCNGC | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 1 cut(s) | 117 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GluI | GCNGC | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 275 |
| HinfI | GANTC | 3 cut(s) | 94, 143, 178 |
| Hpy188I | TCNGA | 1 cut(s) | 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 308 |
| HpyCH4III | ACNGT | 1 cut(s) | 77 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 252 |
| Kzo9I | GATC | 1 cut(s) | 304 |
| Lsp1109I | GCAGC | 1 cut(s) | 103 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MalI | GATC | 1 cut(s) | 306 |
| MboI | GATC | 1 cut(s) | 304 |
| MboII | GAAGA | 3 cut(s) | 20, 187, 212 |
| MfeI | CAATTG | 1 cut(s) | 56 |
| MhlI | GDGCHC | 1 cut(s) | 86 |
| MluCI | AATT | 2 cut(s) | 48, 56 |
| MnlI | CCTC | 4 cut(s) | 4, 73, 205, 265 |
| MunI | CAATTG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 1 cut(s) | 304 |
| PceI | AGGCCT | 1 cut(s) | 275 |
| PfeI | GAWTC | 3 cut(s) | 94, 143, 178 |
| PkrI | GCNGC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 138 |
| RsaNI | GTAC | 1 cut(s) | 137 |
| SatI | GCNGC | 1 cut(s) | 117 |
| Sau3AI | GATC | 1 cut(s) | 304 |
| SduI | GDGCHC | 1 cut(s) | 86 |
| SetI | ASST | 5 cut(s) | 106, 118, 138, 216, 258 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| SgeI | CNNG | 5 cut(s) | 77, 152, 269, 278, 283 |
| Sse9I | AATT | 2 cut(s) | 48, 56 |
| SseBI | AGGCCT | 1 cut(s) | 275 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StuI | AGGCCT | 1 cut(s) | 275 |
| TaaI | ACNGT | 1 cut(s) | 77 |
| TaqI | TCGA | 1 cut(s) | 270 |
| TasI | AATT | 2 cut(s) | 48, 56 |
| TfiI | GAWTC | 3 cut(s) | 94, 143, 178 |
| TscAI | CASTG | 1 cut(s) | 153 |
| TseI | GCWGC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 4 cut(s) | 60, 86, 203, 294 |
| TspRI | CASTG | 1 cut(s) | 153 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 269 |
| XspI | CTAG | 1 cut(s) | 140 |