Rh3CG031300
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0018159
Physical Location & Seq
Forward (+)
2171111 .. 2172556
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG031300.1

Sequence Viewer

Length: 363 bp
ATGGATCGAAGTCTACTAGATGAACAAGTGCTTTCTGATTCAGCAGAGCGAAGCCCAGGCGTTGACAGCGAAGTCTCCTCCACCACAGCCGATGGCGCTGGCTTGATGGCATCGAAAGAAGAAGAGAAGAAGTTGGATATCATATATATATCTCAAGCAGCGAAATTAGAGACACATGGTGCCCCAGTATGTCGATTTTTTTCACTTGAAGAGTTGAAGGAAGCAACAAACGACTTTGATTTCTCAATGTTTTTGTCTGAAGGCTCTATTGGAAAGGAACTTCCAGAGACAGCTATGAGGAAGTATGGAAATTGTATGGCTGATCATACATTCATTGAAGTACCTAACTATGGAAAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

120

Amino Acids

13.2

Weight (kDa)

4.5

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 179
AccI GTMKAC 1 cut(s) 13
AclWI GGATC 1 cut(s) 12
AcuI CTGAAG 1 cut(s) 279
AdeI CACNNNGTG 1 cut(s) 179
AfaI GTAC 1 cut(s) 342
AfiI CCNNNNNNNGG 1 cut(s) 350
AgsI TTSAA 3 cut(s) 209, 217, 338
AjnI CCWGG 1 cut(s) 55
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
AluBI AGCT 1 cut(s) 293
AluI AGCT 1 cut(s) 293
Alw26I GTCTC 3 cut(s) 79, 164, 281
AlwI GGATC 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 158
AspLEI GCGC 1 cut(s) 98
BaeGI GKGCMC 1 cut(s) 184
BanI GGYRCC 1 cut(s) 179
BbvI GCAGC 1 cut(s) 170
BccI CCATC 2 cut(s) 86, 100
BciT130I CCWGG 1 cut(s) 57
BclI TGATCA 1 cut(s) 322
BcoDI GTCTC 3 cut(s) 79, 164, 281
BfaI CTAG 1 cut(s) 17
BfoI RGCGCY 1 cut(s) 99
BisI GCNGC 1 cut(s) 159
BlsI GCNGC 1 cut(s) 160
Bme1390I CCNGG 1 cut(s) 57
BmiI GGNNCC 1 cut(s) 181
BmrFI CCNGG 1 cut(s) 57
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 1 cut(s) 119
BmuI ACTGGG 1 cut(s) 179
BpuEI CTTGAG 1 cut(s) 138
BsaJI CCNNGG 1 cut(s) 55
Bsc4I CCNNNNNNNGG 1 cut(s) 350
Bse1I ACTGG 1 cut(s) 185
BseBI CCWGG 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 55
BseLI CCNNNNNNNGG 1 cut(s) 350
BseNI ACTGG 1 cut(s) 185
BseRI GAGGAG 1 cut(s) 67
BseSI GKGCMC 1 cut(s) 184
BseXI GCAGC 1 cut(s) 170
BshNI GGYRCC 1 cut(s) 179
BslI CCNNNNNNNGG 1 cut(s) 350
BsmAI GTCTC 3 cut(s) 79, 164, 281
Bsp1286I GDGCHC 1 cut(s) 184
Bsp143I GATC 2 cut(s) 4, 322
BspLI GGNNCC 1 cut(s) 181
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 179
BsrI ACTGG 1 cut(s) 185
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 2 cut(s) 4, 322
Bst2UI CCWGG 1 cut(s) 57
Bst6I CTCTTC 2 cut(s) 117, 204
BstC8I GCNNGC 1 cut(s) 100
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 2 cut(s) 7, 325
BstMAI GTCTC 3 cut(s) 79, 164, 281
BstMBI GATC 2 cut(s) 4, 322
BstMWI GCNNNNNNNGC 2 cut(s) 66, 95
BstNI CCWGG 1 cut(s) 57
BstSCI CCNGG 1 cut(s) 55
BstSLI GKGCMC 1 cut(s) 184
BstV1I GCAGC 1 cut(s) 170
Cac8I GCNNGC 1 cut(s) 100
CfoI GCGC 1 cut(s) 98
Csp6I GTAC 1 cut(s) 341
CviAII CATG 2 cut(s) 176, 360
CviJI RGCY 7 cut(s) 54, 89, 102, 264, 293, 320, 358
CviKI_1 RGCY 7 cut(s) 54, 89, 102, 264, 293, 320, 358
CviQI GTAC 1 cut(s) 341
DpnI GATC 2 cut(s) 6, 324
DpnII GATC 2 cut(s) 4, 322
DraIII CACNNNGTG 1 cut(s) 179
DrdI GACNNNNNNGTC 1 cut(s) 71
DseDI GACNNNNNNGTC 1 cut(s) 71
Eam1104I CTCTTC 2 cut(s) 117, 204
EarI CTCTTC 2 cut(s) 117, 204
Eco32I GATATC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 279
EcoRII CCWGG 1 cut(s) 55
EcoRV GATATC 1 cut(s) 139
FaeI CATG 2 cut(s) 179, 363
FatI CATG 2 cut(s) 175, 359
FbaI TGATCA 1 cut(s) 322
FblI GTMKAC 1 cut(s) 13
Fnu4HI GCNGC 1 cut(s) 159
Fsp4HI GCNGC 1 cut(s) 159
FspBI CTAG 1 cut(s) 17
GlaI GCGC 1 cut(s) 97
GluI GCNGC 1 cut(s) 159
HaeII RGCGCY 1 cut(s) 99
HhaI GCGC 1 cut(s) 98
Hin1II CATG 2 cut(s) 179, 363
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HincII GTYRAC 1 cut(s) 64
HindII GTYRAC 1 cut(s) 64
HinfI GANTC 1 cut(s) 38
Hpy166II GTNNAC 2 cut(s) 14, 64
Hpy188I TCNGA 2 cut(s) 37, 259
Hpy188III TCNNGA 1 cut(s) 284
Hpy8I GTNNAC 2 cut(s) 14, 64
HpyAV CCTTC 2 cut(s) 211, 254
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 95
Hsp92II CATG 2 cut(s) 179, 363
HspAI GCGC 1 cut(s) 96
Ksp22I TGATCA 1 cut(s) 322
Kzo9I GATC 2 cut(s) 4, 322
LpnPI CCDG 5 cut(s) 42, 69, 84, 198, 297
Lsp1109I GCAGC 1 cut(s) 170
LweI GCATC 1 cut(s) 119
MaeI CTAG 1 cut(s) 17
MalI GATC 2 cut(s) 6, 324
MboI GATC 2 cut(s) 4, 322
MboII GAAGA 4 cut(s) 131, 134, 139, 221
MhlI GDGCHC 1 cut(s) 184
MluCI AATT 2 cut(s) 164, 310
MmeI TCCRAC 1 cut(s) 114
MnlI CCTC 2 cut(s) 88, 291
MspR9I CCNGG 1 cut(s) 57
MvaI CCWGG 1 cut(s) 57
MwoI GCNNNNNNNGC 2 cut(s) 66, 95
NdeII GATC 2 cut(s) 4, 322
NlaIII CATG 2 cut(s) 179, 363
NlaIV GGNNCC 1 cut(s) 181
PfeI GAWTC 1 cut(s) 38
PkrI GCNGC 1 cut(s) 160
Psp6I CCWGG 1 cut(s) 55
PspGI CCWGG 1 cut(s) 55
PspN4I GGNNCC 1 cut(s) 181
RsaI GTAC 1 cut(s) 342
RsaNI GTAC 1 cut(s) 341
SatI GCNGC 1 cut(s) 159
Sau3AI GATC 2 cut(s) 4, 322
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 1 cut(s) 184
SetI ASST 2 cut(s) 295, 346
SfaNI GCATC 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 153
SmoI CTYRAG 1 cut(s) 153
Sse9I AATT 2 cut(s) 164, 310
SspMI CTAG 1 cut(s) 17
StyD4I CCNGG 1 cut(s) 55
TaqI TCGA 3 cut(s) 7, 113, 193
TasI AATT 2 cut(s) 164, 310
TfiI GAWTC 1 cut(s) 38
TseI GCWGC 1 cut(s) 158
TspDTI ATGAA 2 cut(s) 36, 322
XmiI GTMKAC 1 cut(s) 13
XspI CTAG 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.