Rh7CG275100
NAC Family

Inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0018159
Physical Location & Seq
Forward (+)
27566968 .. 27569046
2079 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG275100.1

Sequence Viewer

Length: 414 bp
ATGGCTATGGTTAAGAATGAAAGATTGCTCTGGCACCATCGACCACTTCAGGCAAGTGATGTCCTTGCTGTGGAGCTTTTGCAAAAAGATGCACGACTTGCCTGCGGAATCTGGGGTATTTATTGGAAAAGTTTGAAAAGAAGGATACATATATCTCAAGCAGCGAAATTAGAGACACATGGTGCCCTAGTATGTCGATTGTTTTCACTTGAAGTGTTGAAGGAAGCAACAAATGACTTTGATTTCTCAATGTTTTTGTGTGAAGGCTCTATTGGAAAGGAACTTCCAGAGACAGCTATGAAGAAGTATGGAAATTGTATGGCTGATCATACATTCCTTGAAGTACCTAACTGTGGAAAGCCATGGCAAGTCGAACTGAGAACATCAGCTCCATTGGGTTTACTTGGAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

137

Amino Acids

15.48

Weight (kDa)

8.3

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 33, 182
AciI CCGC 1 cut(s) 105
AcuI CTGAAG 1 cut(s) 32
AdeI CACNNNGTG 1 cut(s) 182
AfaI GTAC 1 cut(s) 345
AfiI CCNNNNNNNGG 2 cut(s) 70, 353
AgsI TTSAA 4 cut(s) 136, 212, 220, 341
AjuI GAANNNNNNNTTGG 2 cut(s) 255, 287
AloI GAACNNNNNNTCC 2 cut(s) 373, 405
AluBI AGCT 3 cut(s) 76, 296, 389
AluI AGCT 3 cut(s) 76, 296, 389
Alw26I GTCTC 2 cut(s) 167, 284
ApeKI GCWGC 1 cut(s) 161
BaeGI GKGCMC 1 cut(s) 187
BanI GGYRCC 2 cut(s) 33, 182
BbvI GCAGC 1 cut(s) 173
BccI CCATC 1 cut(s) 45
BcgI CGANNNNNNTGC 2 cut(s) 84, 118
BciVI GTATCC 1 cut(s) 138
BclI TGATCA 1 cut(s) 325
BcoDI GTCTC 2 cut(s) 167, 284
BfaI CTAG 1 cut(s) 188
BfuI GTATCC 1 cut(s) 138
BisI GCNGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 163
BmiI GGNNCC 2 cut(s) 35, 184
BmsI GCATC 1 cut(s) 79
BpuEI CTTGAG 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 362
BsaXI ACNNNNNCTCC 2 cut(s) 373, 403
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 353
BseDI CCNNGG 1 cut(s) 362
BseLI CCNNNNNNNGG 2 cut(s) 70, 353
BseMII CTCAG 1 cut(s) 368
BseSI GKGCMC 1 cut(s) 187
BseXI GCAGC 1 cut(s) 173
BshNI GGYRCC 2 cut(s) 33, 182
BslI CCNNNNNNNGG 2 cut(s) 70, 353
BsmAI GTCTC 2 cut(s) 167, 284
Bsp1286I GDGCHC 1 cut(s) 187
Bsp143I GATC 1 cut(s) 325
Bsp19I CCATGG 1 cut(s) 362
BspACI CCGC 1 cut(s) 105
BspCNI CTCAG 1 cut(s) 369
BspLI GGNNCC 2 cut(s) 35, 184
BspT107I GGYRCC 2 cut(s) 33, 182
BssECI CCNNGG 1 cut(s) 362
BssMI GATC 1 cut(s) 325
BssT1I CCWWGG 1 cut(s) 362
Bst4CI ACNGT 1 cut(s) 353
BstAPI GCANNNNNTGC 1 cut(s) 98
BstC8I GCNNGC 1 cut(s) 103
BstDEI CTNAG 1 cut(s) 377
BstDSI CCRYGG 1 cut(s) 362
BstKTI GATC 1 cut(s) 328
BstMAI GTCTC 2 cut(s) 167, 284
BstMBI GATC 1 cut(s) 325
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstSLI GKGCMC 1 cut(s) 187
BstV1I GCAGC 1 cut(s) 173
BsuI GTATCC 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 362
Cac8I GCNNGC 1 cut(s) 103
Csp6I GTAC 1 cut(s) 344
CviAII CATG 2 cut(s) 179, 363
CviJI RGCY 7 cut(s) 5, 76, 267, 296, 323, 361, 389
CviKI_1 RGCY 7 cut(s) 5, 76, 267, 296, 323, 361, 389
CviQI GTAC 1 cut(s) 344
DdeI CTNAG 1 cut(s) 377
DpnI GATC 1 cut(s) 327
DpnII GATC 1 cut(s) 325
DraIII CACNNNGTG 1 cut(s) 182
Eco130I CCWWGG 1 cut(s) 362
Eco57I CTGAAG 1 cut(s) 32
EcoT14I CCWWGG 1 cut(s) 362
ErhI CCWWGG 1 cut(s) 362
FaeI CATG 2 cut(s) 182, 366
FatI CATG 2 cut(s) 178, 362
FbaI TGATCA 1 cut(s) 325
Fnu4HI GCNGC 1 cut(s) 162
Fsp4HI GCNGC 1 cut(s) 162
FspBI CTAG 1 cut(s) 188
GluI GCNGC 1 cut(s) 162
Hin1II CATG 2 cut(s) 182, 366
HinfI GANTC 1 cut(s) 108
Hpy166II GTNNAC 1 cut(s) 401
Hpy188III TCNNGA 1 cut(s) 287
Hpy8I GTNNAC 1 cut(s) 401
HpyAV CCTTC 3 cut(s) 135, 214, 257
HpyCH4III ACNGT 1 cut(s) 353
HpyCH4V TGCA 2 cut(s) 82, 92
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 377
Hsp92II CATG 2 cut(s) 182, 366
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 1 cut(s) 325
LmnI GCTCC 2 cut(s) 73, 394
LpnPI CCDG 5 cut(s) 16, 35, 97, 115, 300
Lsp1109I GCAGC 1 cut(s) 173
LweI GCATC 1 cut(s) 79
MaeI CTAG 1 cut(s) 188
MalI GATC 1 cut(s) 327
MboI GATC 1 cut(s) 325
MboII GAAGA 1 cut(s) 313
MhlI GDGCHC 1 cut(s) 187
MluCI AATT 2 cut(s) 167, 313
MseI TTAA 1 cut(s) 12
MwoI GCNNNNNNNGC 1 cut(s) 98
NcoI CCATGG 1 cut(s) 362
NdeII GATC 1 cut(s) 325
NlaIII CATG 2 cut(s) 182, 366
NlaIV GGNNCC 2 cut(s) 35, 184
PfeI GAWTC 1 cut(s) 108
PkrI GCNGC 1 cut(s) 163
PspN4I GGNNCC 2 cut(s) 35, 184
RsaI GTAC 1 cut(s) 345
RsaNI GTAC 1 cut(s) 344
SaqAI TTAA 1 cut(s) 12
SatI GCNGC 1 cut(s) 162
Sau3AI GATC 1 cut(s) 325
SduI GDGCHC 1 cut(s) 187
SetI ASST 4 cut(s) 78, 298, 349, 391
SfaNI GCATC 1 cut(s) 79
SmlI CTYRAG 1 cut(s) 156
SmoI CTYRAG 1 cut(s) 156
Sse9I AATT 2 cut(s) 167, 313
SsiI CCGC 1 cut(s) 105
SspMI CTAG 1 cut(s) 188
StyI CCWWGG 1 cut(s) 362
TaaI ACNGT 1 cut(s) 353
TaqI TCGA 3 cut(s) 40, 196, 372
TasI AATT 2 cut(s) 167, 313
TfiI GAWTC 1 cut(s) 108
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TseI GCWGC 1 cut(s) 161
TspDTI ATGAA 2 cut(s) 33, 314
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.