alpha-galactosidase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g05560 |
| rosa_chinensis | RchiOBHm_Chr3g0454341 |
| rosa_laevigata | RLG00000025459 |
| rosa_multiflora | Rmu_sc0000006.1_g000022 Rmu_sc0007209.1_g000014 |
| rosa_roxburghii | Rroxscaffold_165G00437170 Rroxscaffold_6G00425190 |
| rosa_rugosa | Rorug02G0654200 Rorug02G0654300 Rorug02G0654400 Rorug02G0654500 |
| rosa_samantha | Rh3AG058400 Rh3BG060100 Rh3CG059200 Rh3DG060500 |
| rosa_wichuraiana | Rw3G004490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 293, 977 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 144, 487 |
| AccI | GTMKAC | 1 cut(s) | 297 |
| AciI | CCGC | 1 cut(s) | 1290 |
| AclWI | GGATC | 4 cut(s) | 82, 485, 498, 563 |
| AcoI | YGGCCR | 2 cut(s) | 807, 1065 |
| AcsI | RAATTY | 1 cut(s) | 531 |
| AcuI | CTGAAG | 2 cut(s) | 411, 1221 |
| AfaI | GTAC | 2 cut(s) | 408, 839 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 140, 144, 375, 487, 500, 788, 972 |
| AflIII | ACRYGT | 1 cut(s) | 834 |
| AgsI | TTSAA | 3 cut(s) | 424, 523, 993 |
| AhlI | ACTAGT | 1 cut(s) | 1438 |
| AjnI | CCWGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| AluBI | AGCT | 8 cut(s) | 168, 366, 464, 620, 939, 1105, 1167, 1346 |
| AluI | AGCT | 8 cut(s) | 168, 366, 464, 620, 939, 1105, 1167, 1346 |
| Alw21I | GWGCWC | 1 cut(s) | 577 |
| Alw26I | GTCTC | 2 cut(s) | 328, 1077 |
| AlwI | GGATC | 4 cut(s) | 82, 485, 498, 563 |
| Ama87I | CYCGRG | 1 cut(s) | 499 |
| AoxI | GGCC | 4 cut(s) | 359, 807, 944, 1065 |
| ApeKI | GCWGC | 2 cut(s) | 911, 914 |
| ApoI | RAATTY | 1 cut(s) | 531 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 680, 712 |
| AseI | ATTAAT | 1 cut(s) | 435 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1206 |
| AspLEI | GCGC | 1 cut(s) | 290 |
| AspS9I | GGNCC | 2 cut(s) | 256, 1001 |
| AsuNHI | GCTAGC | 1 cut(s) | 125 |
| AvaI | CYCGRG | 1 cut(s) | 499 |
| AvaII | GGWCC | 2 cut(s) | 256, 1001 |
| BaeGI | GKGCMC | 1 cut(s) | 1318 |
| BalI | TGGCCA | 2 cut(s) | 809, 1067 |
| BamHI | GGATCC | 1 cut(s) | 490 |
| BauI | CACGAG | 1 cut(s) | 940 |
| BbsI | GAAGAC | 3 cut(s) | 34, 1237, 1283 |
| Bbv12I | GWGCWC | 1 cut(s) | 577 |
| BbvI | GCAGC | 2 cut(s) | 898, 901 |
| BccI | CCATC | 4 cut(s) | 65, 267, 799, 966 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 921, 955 |
| BciT130I | CCWGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| BciVI | GTATCC | 1 cut(s) | 598 |
| BcoDI | GTCTC | 2 cut(s) | 328, 1077 |
| BcuI | ACTAGT | 1 cut(s) | 1438 |
| BfaI | CTAG | 7 cut(s) | 126, 291, 363, 1148, 1341, 1379, 1439 |
| BfmI | CTRYAG | 1 cut(s) | 1416 |
| BfuAI | ACCTGC | 2 cut(s) | 293, 977 |
| BfuI | GTATCC | 1 cut(s) | 598 |
| BglII | AGATCT | 1 cut(s) | 1093 |
| BisI | GCNGC | 2 cut(s) | 912, 915 |
| BlsI | GCNGC | 2 cut(s) | 913, 916 |
| Bme1390I | CCNGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| Bme18I | GGWCC | 2 cut(s) | 256, 1001 |
| BmeT110I | CYCGRG | 1 cut(s) | 499 |
| BmgT120I | GGNCC | 2 cut(s) | 256, 1001 |
| BmiI | GGNNCC | 2 cut(s) | 492, 1373 |
| BmrFI | CCNGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| BmrI | ACTGGG | 2 cut(s) | 868, 877 |
| BmsI | GCATC | 4 cut(s) | 330, 570, 743, 973 |
| BmtI | GCTAGC | 1 cut(s) | 129 |
| BmuI | ACTGGG | 2 cut(s) | 868, 877 |
| BpiI | GAAGAC | 3 cut(s) | 34, 1237, 1283 |
| BpmI | CTGGAG | 1 cut(s) | 352 |
| BsaI | GGTCTC | 1 cut(s) | 328 |
| BsaJI | CCNNGG | 6 cut(s) | 900, 966, 967, 1311, 1322, 1426 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 300, 330 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 140, 144, 375, 487, 500, 788, 972 |
| Bse1I | ACTGG | 4 cut(s) | 43, 863, 872, 1231 |
| Bse3DI | GCAATG | 2 cut(s) | 1410, 1450 |
| BseBI | CCWGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| BseDI | CCNNGG | 6 cut(s) | 900, 966, 967, 1311, 1322, 1426 |
| BseGI | GGATG | 3 cut(s) | 585, 868, 977 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 140, 144, 375, 487, 500, 788, 972 |
| BseMI | GCAATG | 2 cut(s) | 1410, 1450 |
| BseMII | CTCAG | 1 cut(s) | 1088 |
| BseNI | ACTGG | 4 cut(s) | 43, 863, 872, 1231 |
| BseRI | GAGGAG | 3 cut(s) | 1046, 1065, 1104 |
| BseSI | GKGCMC | 1 cut(s) | 1318 |
| BseXI | GCAGC | 2 cut(s) | 898, 901 |
| BsgI | GTGCAG | 2 cut(s) | 525, 1419 |
| BshFI | GGCC | 4 cut(s) | 361, 809, 946, 1067 |
| BsiHKAI | GWGCWC | 1 cut(s) | 577 |
| BsiHKCI | CYCGRG | 1 cut(s) | 499 |
| BslFI | GGGAC | 2 cut(s) | 1339, 1444 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 140, 144, 375, 487, 500, 788, 972 |
| BsmAI | GTCTC | 2 cut(s) | 328, 1077 |
| BsmFI | GGGAC | 2 cut(s) | 1339, 1444 |
| BsnI | GGCC | 4 cut(s) | 361, 809, 946, 1067 |
| Bso31I | GGTCTC | 1 cut(s) | 328 |
| BsoBI | CYCGRG | 1 cut(s) | 499 |
| Bsp1286I | GDGCHC | 2 cut(s) | 577, 1318 |
| Bsp1407I | TGTACA | 1 cut(s) | 837 |
| Bsp143I | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| Bsp19I | CCATGG | 1 cut(s) | 1426 |
| BspACI | CCGC | 1 cut(s) | 1290 |
| BspANI | GGCC | 4 cut(s) | 361, 809, 946, 1067 |
| BspCNI | CTCAG | 1 cut(s) | 1089 |
| BspHI | TCATGA | 1 cut(s) | 594 |
| BspLI | GGNNCC | 2 cut(s) | 492, 1373 |
| BspMI | ACCTGC | 2 cut(s) | 293, 977 |
| BspOI | GCTAGC | 1 cut(s) | 129 |
| BspPI | GGATC | 4 cut(s) | 82, 485, 498, 563 |
| BspTNI | GGTCTC | 1 cut(s) | 328 |
| BsrDI | GCAATG | 2 cut(s) | 1410, 1450 |
| BsrGI | TGTACA | 1 cut(s) | 837 |
| BsrI | ACTGG | 4 cut(s) | 43, 863, 872, 1231 |
| BssECI | CCNNGG | 6 cut(s) | 900, 966, 967, 1311, 1322, 1426 |
| BssMI | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| BssSI | CACGAG | 1 cut(s) | 940 |
| BssT1I | CCWWGG | 1 cut(s) | 1426 |
| Bst2BI | CACGAG | 1 cut(s) | 940 |
| Bst2UI | CCWGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| Bst4CI | ACNGT | 3 cut(s) | 654, 842, 1124 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstAUI | TGTACA | 1 cut(s) | 837 |
| BstC8I | GCNNGC | 2 cut(s) | 127, 618 |
| BstDEI | CTNAG | 5 cut(s) | 32, 952, 977, 1097, 1306 |
| BstDSI | CCRYGG | 1 cut(s) | 1426 |
| BstF5I | GGATG | 3 cut(s) | 585, 868, 977 |
| BstHHI | GCGC | 1 cut(s) | 290 |
| BstKTI | GATC | 6 cut(s) | 77, 91, 493, 558, 1096, 1155 |
| BstMAI | GTCTC | 2 cut(s) | 328, 1077 |
| BstMBI | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 470 |
| BstNI | CCWGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| BstNSI | RCATGY | 1 cut(s) | 838 |
| BstSCI | CCNGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| BstSFI | CTRYAG | 1 cut(s) | 1416 |
| BstSLI | GKGCMC | 1 cut(s) | 1318 |
| BstV1I | GCAGC | 2 cut(s) | 898, 901 |
| BstV2I | GAAGAC | 3 cut(s) | 34, 1237, 1283 |
| BstX2I | RGATCY | 2 cut(s) | 490, 1093 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 357 |
| BstYI | RGATCY | 2 cut(s) | 490, 1093 |
| BsuI | GTATCC | 1 cut(s) | 598 |
| BsuRI | GGCC | 4 cut(s) | 361, 809, 946, 1067 |
| BtgI | CCRYGG | 1 cut(s) | 1426 |
| BtsCI | GGATG | 3 cut(s) | 585, 868, 977 |
| BtsIMutI | CAGTG | 1 cut(s) | 1129 |
| BveI | ACCTGC | 2 cut(s) | 293, 977 |
| Cac8I | GCNNGC | 2 cut(s) | 127, 618 |
| CciI | TCATGA | 1 cut(s) | 594 |
| CfoI | GCGC | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 2 cut(s) | 256, 1001 |
| Csp6I | GTAC | 2 cut(s) | 407, 838 |
| CviQI | GTAC | 2 cut(s) | 407, 838 |
| DdeI | CTNAG | 5 cut(s) | 32, 952, 977, 1097, 1306 |
| DpnI | GATC | 6 cut(s) | 76, 90, 492, 557, 1095, 1154 |
| DpnII | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| EaeI | YGGCCR | 2 cut(s) | 807, 1065 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| Eco130I | CCWWGG | 1 cut(s) | 1426 |
| Eco31I | GGTCTC | 1 cut(s) | 328 |
| Eco47I | GGWCC | 2 cut(s) | 256, 1001 |
| Eco57I | CTGAAG | 2 cut(s) | 411, 1221 |
| Eco88I | CYCGRG | 1 cut(s) | 499 |
| EcoRII | CCWGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| EcoT14I | CCWWGG | 1 cut(s) | 1426 |
| EcoT22I | ATGCAT | 1 cut(s) | 736 |
| ErhI | CCWWGG | 1 cut(s) | 1426 |
| FaqI | GGGAC | 2 cut(s) | 1339, 1444 |
| FblI | GTMKAC | 1 cut(s) | 297 |
| Fnu4HI | GCNGC | 2 cut(s) | 912, 915 |
| FokI | GGATG | 3 cut(s) | 592, 875, 984 |
| Fsp4HI | GCNGC | 2 cut(s) | 912, 915 |
| FspBI | CTAG | 7 cut(s) | 126, 291, 363, 1148, 1341, 1379, 1439 |
| GlaI | GCGC | 1 cut(s) | 289 |
| GluI | GCNGC | 2 cut(s) | 912, 915 |
| GsuI | CTGGAG | 1 cut(s) | 352 |
| HaeIII | GGCC | 4 cut(s) | 361, 809, 946, 1067 |
| HhaI | GCGC | 1 cut(s) | 290 |
| Hin6I | GCGC | 1 cut(s) | 288 |
| HinP1I | GCGC | 1 cut(s) | 288 |
| HindIII | AAGCTT | 1 cut(s) | 1103 |
| HinfI | GANTC | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 5 cut(s) | 256, 298, 387, 832, 1004 |
| Hpy188I | TCNGA | 6 cut(s) | 102, 579, 1098, 1201, 1266, 1303 |
| Hpy188III | TCNNGA | 2 cut(s) | 369, 595 |
| Hpy8I | GTNNAC | 5 cut(s) | 256, 298, 387, 832, 1004 |
| HpyAV | CCTTC | 3 cut(s) | 618, 992, 1196 |
| HpyCH4III | ACNGT | 3 cut(s) | 654, 842, 1124 |
| HpyCH4IV | ACGT | 1 cut(s) | 1248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 470 |
| HpyF3I | CTNAG | 5 cut(s) | 32, 952, 977, 1097, 1306 |
| HpySE526I | ACGT | 1 cut(s) | 1248 |
| HspAI | GCGC | 1 cut(s) | 288 |
| Kzo9I | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| LmnI | GCTCC | 5 cut(s) | 371, 791, 929, 1033, 1371 |
| Lsp1109I | GCAGC | 2 cut(s) | 898, 901 |
| LweI | GCATC | 4 cut(s) | 330, 570, 743, 973 |
| MaeI | CTAG | 7 cut(s) | 126, 291, 363, 1148, 1341, 1379, 1439 |
| MaeII | ACGT | 1 cut(s) | 1248 |
| MaeIII | GTNAC | 3 cut(s) | 111, 222, 280 |
| MalI | GATC | 6 cut(s) | 76, 90, 492, 557, 1095, 1154 |
| MboI | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| MboII | GAAGA | 8 cut(s) | 39, 80, 83, 197, 622, 884, 1242, 1288 |
| MfeI | CAATTG | 1 cut(s) | 661 |
| MflI | RGATCY | 2 cut(s) | 490, 1093 |
| MhlI | GDGCHC | 2 cut(s) | 577, 1318 |
| MlsI | TGGCCA | 2 cut(s) | 809, 1067 |
| MluCI | AATT | 7 cut(s) | 318, 432, 531, 661, 786, 1156, 1456 |
| MluNI | TGGCCA | 2 cut(s) | 809, 1067 |
| MlyI | GAGTC | 1 cut(s) | 293 |
| MmeI | TCCRAC | 1 cut(s) | 125 |
| Mox20I | TGGCCA | 2 cut(s) | 809, 1067 |
| Mph1103I | ATGCAT | 1 cut(s) | 736 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1206 |
| MscI | TGGCCA | 2 cut(s) | 809, 1067 |
| MseI | TTAA | 3 cut(s) | 96, 435, 1260 |
| MslI | CAYNNNNRTG | 2 cut(s) | 237, 599 |
| Msp20I | TGGCCA | 2 cut(s) | 809, 1067 |
| MspA1I | CMGCKG | 1 cut(s) | 168 |
| MspR9I | CCNGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| MunI | CAATTG | 1 cut(s) | 661 |
| MvaI | CCWGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 470 |
| NcoI | CCATGG | 1 cut(s) | 1426 |
| NdeII | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| NheI | GCTAGC | 1 cut(s) | 125 |
| NlaIV | GGNNCC | 2 cut(s) | 492, 1373 |
| NmuCI | GTSAC | 2 cut(s) | 111, 280 |
| NsiI | ATGCAT | 1 cut(s) | 736 |
| NspI | RCATGY | 1 cut(s) | 838 |
| PagI | TCATGA | 1 cut(s) | 594 |
| PasI | CCCWGGG | 1 cut(s) | 967 |
| PciI | ACATGT | 1 cut(s) | 834 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1206 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 144, 487 |
| PfoI | TCCNGGA | 1 cut(s) | 781 |
| PkrI | GCNGC | 2 cut(s) | 913, 916 |
| PleI | GAGTC | 1 cut(s) | 293 |
| PpsI | GAGTC | 1 cut(s) | 293 |
| PscI | ACATGT | 1 cut(s) | 834 |
| PshBI | ATTAAT | 1 cut(s) | 435 |
| Psp6I | CCWGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| PspGI | CCWGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| PspN4I | GGNNCC | 2 cut(s) | 492, 1373 |
| PspPI | GGNCC | 2 cut(s) | 256, 1001 |
| PsuI | RGATCY | 2 cut(s) | 490, 1093 |
| PvuII | CAGCTG | 1 cut(s) | 168 |
| RsaI | GTAC | 2 cut(s) | 408, 839 |
| RsaNI | GTAC | 2 cut(s) | 407, 838 |
| RseI | CAYNNNNRTG | 2 cut(s) | 237, 599 |
| SaqAI | TTAA | 3 cut(s) | 96, 435, 1260 |
| SatI | GCNGC | 2 cut(s) | 912, 915 |
| Sau3AI | GATC | 6 cut(s) | 74, 88, 490, 555, 1093, 1152 |
| Sau96I | GGNCC | 2 cut(s) | 256, 1001 |
| SchI | GAGTC | 1 cut(s) | 293 |
| ScrFI | CCNGG | 5 cut(s) | 783, 901, 968, 1312, 1323 |
| SduI | GDGCHC | 2 cut(s) | 577, 1318 |
| SfaNI | GCATC | 4 cut(s) | 330, 570, 743, 973 |
| SfcI | CTRYAG | 1 cut(s) | 1416 |
| SinI | GGWCC | 2 cut(s) | 256, 1001 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 237, 599 |
| SpeI | ACTAGT | 1 cut(s) | 1438 |
| Sse9I | AATT | 7 cut(s) | 318, 432, 531, 661, 786, 1156, 1456 |
| SsiI | CCGC | 1 cut(s) | 1290 |
| SspMI | CTAG | 7 cut(s) | 126, 291, 363, 1148, 1341, 1379, 1439 |
| StyD4I | CCNGG | 5 cut(s) | 781, 899, 966, 1310, 1321 |
| StyI | CCWWGG | 1 cut(s) | 1426 |
| TaaI | ACNGT | 3 cut(s) | 654, 842, 1124 |
| TaiI | ACGT | 1 cut(s) | 1251 |
| TaqII | GACCGA | 1 cut(s) | 352 |
| TasI | AATT | 7 cut(s) | 318, 432, 531, 661, 786, 1156, 1456 |
| TatI | WGTACW | 2 cut(s) | 406, 837 |
| Tru1I | TTAA | 3 cut(s) | 96, 435, 1260 |
| Tru9I | TTAA | 3 cut(s) | 96, 435, 1260 |
| TscAI | CASTG | 1 cut(s) | 1129 |
| TseFI | GTSAC | 2 cut(s) | 111, 280 |
| TseI | GCWGC | 2 cut(s) | 911, 914 |
| Tsp45I | GTSAC | 2 cut(s) | 111, 280 |
| TspDTI | ATGAA | 6 cut(s) | 81, 339, 583, 731, 735, 1011 |
| TspRI | CASTG | 1 cut(s) | 1129 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 144, 487 |
| VpaK11BI | GGWCC | 2 cut(s) | 256, 1001 |
| VspI | ATTAAT | 1 cut(s) | 435 |
| XapI | RAATTY | 1 cut(s) | 531 |
| XceI | RCATGY | 1 cut(s) | 838 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 68, 141 |
| XmiI | GTMKAC | 1 cut(s) | 297 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1206 |
| XspI | CTAG | 7 cut(s) | 126, 291, 363, 1148, 1341, 1379, 1439 |
| Zsp2I | ATGCAT | 1 cut(s) | 736 |