No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g16980 |
| rosa_chinensis | RchiOBHm_Chr3g0486021 |
| rosa_laevigata | RLG00000023111 |
| rosa_multiflora | Rmu_co8379655.1_g000001 Rmu_sc0006229.1_g000003 |
| rosa_samantha | Rh3CG306600 Rh3DG302800 Rh5CG266800 Rh5CG570100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 180 |
| AciI | CCGC | 4 cut(s) | 116, 137, 144, 176 |
| AclWI | GGATC | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 22, 118 |
| AjnI | CCWGG | 2 cut(s) | 15, 54 |
| AlwI | GGATC | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 104 |
| AsuC2I | CCSGG | 1 cut(s) | 113 |
| AsuHPI | GGTGA | 3 cut(s) | 58, 109, 172 |
| BaeGI | GKGCMC | 1 cut(s) | 185 |
| BanI | GGYRCC | 1 cut(s) | 180 |
| BciT130I | CCWGG | 2 cut(s) | 17, 56 |
| BcnI | CCSGG | 1 cut(s) | 113 |
| Bme1390I | CCNGG | 3 cut(s) | 17, 56, 113 |
| BmiI | GGNNCC | 1 cut(s) | 182 |
| BmrFI | CCNGG | 3 cut(s) | 17, 56, 113 |
| BpmI | CTGGAG | 1 cut(s) | 98 |
| BpuMI | CCSGG | 1 cut(s) | 113 |
| BsaJI | CCNNGG | 1 cut(s) | 55 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 22, 118 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseBI | CCWGG | 2 cut(s) | 17, 56 |
| BseDI | CCNNGG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 22, 118 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BseSI | GKGCMC | 1 cut(s) | 185 |
| BshNI | GGYRCC | 1 cut(s) | 180 |
| BsiSI | CCGG | 1 cut(s) | 113 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 22, 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 185 |
| Bsp143I | GATC | 1 cut(s) | 59 |
| BspACI | CCGC | 4 cut(s) | 116, 137, 144, 176 |
| BspLI | GGNNCC | 1 cut(s) | 182 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BspT107I | GGYRCC | 1 cut(s) | 180 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssECI | CCNNGG | 1 cut(s) | 55 |
| BssMI | GATC | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 2 cut(s) | 17, 56 |
| BstDEI | CTNAG | 1 cut(s) | 186 |
| BstKTI | GATC | 1 cut(s) | 62 |
| BstMBI | GATC | 1 cut(s) | 59 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 2 cut(s) | 17, 56 |
| BstNSI | RCATGY | 1 cut(s) | 54 |
| BstSCI | CCNGG | 3 cut(s) | 15, 54, 111 |
| BstSLI | GKGCMC | 1 cut(s) | 185 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| CviAII | CATG | 1 cut(s) | 51 |
| DdeI | CTNAG | 1 cut(s) | 186 |
| DpnI | GATC | 1 cut(s) | 61 |
| DpnII | GATC | 1 cut(s) | 59 |
| EciI | GGCGGA | 1 cut(s) | 131 |
| EcoRII | CCWGG | 2 cut(s) | 15, 54 |
| FaeI | CATG | 1 cut(s) | 54 |
| FaiI | YATR | 1 cut(s) | 52 |
| FatI | CATG | 1 cut(s) | 50 |
| FauI | CCCGC | 2 cut(s) | 137, 169 |
| GsuI | CTGGAG | 1 cut(s) | 98 |
| HapII | CCGG | 1 cut(s) | 113 |
| Hin1II | CATG | 1 cut(s) | 54 |
| HinfI | GANTC | 1 cut(s) | 122 |
| HpaII | CCGG | 1 cut(s) | 113 |
| HphI | GGTGA | 3 cut(s) | 58, 109, 172 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 1 cut(s) | 67 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| HpyAV | CCTTC | 2 cut(s) | 22, 148 |
| HpyCH4IV | ACGT | 1 cut(s) | 72 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 1 cut(s) | 186 |
| HpySE526I | ACGT | 1 cut(s) | 72 |
| Hsp92II | CATG | 1 cut(s) | 54 |
| Kzo9I | GATC | 1 cut(s) | 59 |
| MaeII | ACGT | 1 cut(s) | 72 |
| MaeIII | GTNAC | 1 cut(s) | 46 |
| MalI | GATC | 1 cut(s) | 61 |
| MboI | GATC | 1 cut(s) | 59 |
| MhlI | GDGCHC | 1 cut(s) | 185 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 61, 112 |
| MroXI | GAANNNNTTC | 1 cut(s) | 104 |
| MspI | CCGG | 1 cut(s) | 113 |
| MspR9I | CCNGG | 3 cut(s) | 17, 56, 113 |
| MvaI | CCWGG | 2 cut(s) | 17, 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NciI | CCSGG | 1 cut(s) | 113 |
| NdeII | GATC | 1 cut(s) | 59 |
| NlaIII | CATG | 1 cut(s) | 54 |
| NlaIV | GGNNCC | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 46 |
| NspI | RCATGY | 1 cut(s) | 54 |
| PdmI | GAANNNNTTC | 1 cut(s) | 104 |
| PleI | GAGTC | 1 cut(s) | 130 |
| PpsI | GAGTC | 1 cut(s) | 130 |
| Psp6I | CCWGG | 2 cut(s) | 15, 54 |
| PspGI | CCWGG | 2 cut(s) | 15, 54 |
| PspN4I | GGNNCC | 1 cut(s) | 182 |
| Sau3AI | GATC | 1 cut(s) | 59 |
| SchI | GAGTC | 1 cut(s) | 131 |
| ScrFI | CCNGG | 3 cut(s) | 17, 56, 113 |
| SduI | GDGCHC | 1 cut(s) | 185 |
| SetI | ASST | 2 cut(s) | 75, 159 |
| SsiI | CCGC | 4 cut(s) | 116, 137, 144, 176 |
| StyD4I | CCNGG | 3 cut(s) | 15, 54, 111 |
| TaiI | ACGT | 1 cut(s) | 75 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TseFI | GTSAC | 1 cut(s) | 46 |
| Tsp45I | GTSAC | 1 cut(s) | 46 |
| TspGWI | ACGGA | 1 cut(s) | 101 |
| TspRI | CASTG | 1 cut(s) | 156 |
| XceI | RCATGY | 1 cut(s) | 54 |
| XmnI | GAANNNNTTC | 1 cut(s) | 104 |