Rh5CG266800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
28688275 .. 28688463
189 bp
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UTR
Exon/CDS
Intron
Rh5CG266800.1

Sequence Viewer

Length: 189 bp
ATGGCGGGTGTATGCCTGGAAATGGAGAAGGAGATCACAAGCAAGGTGACATGCCAGGGGTCGTCAGAGGACGTACTGGAGATGACAGATTTGCTGGTGAAGTCACTCGACCTGGCGGAGGAGTCTGTTGCGGCGGTAATGTGTGGGCCAGTGAAGGTGGTGAACTGGAACAGGGCGGGGTGCCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.62

Weight (kDa)

4.36

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018848)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 180
AciI CCGC 5 cut(s) 5, 116, 131, 134, 176
AfaI GTAC 1 cut(s) 75
AfiI CCNNNNNNNGG 2 cut(s) 22, 118
AjnI CCWGG 3 cut(s) 15, 54, 111
AoxI GGCC 1 cut(s) 146
AspS9I GGNCC 1 cut(s) 146
AsuHPI GGTGA 3 cut(s) 58, 109, 172
BaeGI GKGCMC 1 cut(s) 185
BanI GGYRCC 1 cut(s) 180
BciT130I CCWGG 3 cut(s) 17, 56, 113
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
Bme1390I CCNGG 3 cut(s) 17, 56, 113
BmgT120I GGNCC 1 cut(s) 146
BmiI GGNNCC 1 cut(s) 182
BmrFI CCNGG 3 cut(s) 17, 56, 113
BpmI CTGGAG 1 cut(s) 98
BsaJI CCNNGG 1 cut(s) 55
Bsc4I CCNNNNNNNGG 2 cut(s) 22, 118
Bse1I ACTGG 3 cut(s) 81, 149, 170
BseBI CCWGG 3 cut(s) 17, 56, 113
BseDI CCNNGG 1 cut(s) 55
BseLI CCNNNNNNNGG 2 cut(s) 22, 118
BseNI ACTGG 3 cut(s) 81, 149, 170
BseRI GAGGAG 1 cut(s) 134
BseSI GKGCMC 1 cut(s) 185
BshFI GGCC 1 cut(s) 148
BshNI GGYRCC 1 cut(s) 180
BslI CCNNNNNNNGG 2 cut(s) 22, 118
BsnI GGCC 1 cut(s) 148
Bsp1286I GDGCHC 1 cut(s) 185
Bsp143I GATC 1 cut(s) 33
BspACI CCGC 5 cut(s) 5, 116, 131, 134, 176
BspANI GGCC 1 cut(s) 148
BspLI GGNNCC 1 cut(s) 182
BspT107I GGYRCC 1 cut(s) 180
BsrI ACTGG 3 cut(s) 81, 149, 170
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 1 cut(s) 33
Bst2UI CCWGG 3 cut(s) 17, 56, 113
BstDEI CTNAG 1 cut(s) 186
BstENI CCTNNNNNAGG 1 cut(s) 116
BstKTI GATC 1 cut(s) 36
BstMBI GATC 1 cut(s) 33
BstNI CCWGG 3 cut(s) 17, 56, 113
BstNSI RCATGY 1 cut(s) 54
BstSCI CCNGG 3 cut(s) 15, 54, 111
BstSLI GKGCMC 1 cut(s) 185
BsuRI GGCC 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 156
Cfr13I GGNCC 1 cut(s) 146
Csp6I GTAC 1 cut(s) 74
CviAII CATG 1 cut(s) 51
CviJI RGCY 1 cut(s) 148
CviKI_1 RGCY 1 cut(s) 148
CviQI GTAC 1 cut(s) 74
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 35
DpnII GATC 1 cut(s) 33
EciI GGCGGA 1 cut(s) 131
EcoNI CCTNNNNNAGG 1 cut(s) 116
EcoRII CCWGG 3 cut(s) 15, 54, 111
FaeI CATG 1 cut(s) 54
FaiI YATR 2 cut(s) 13, 52
FatI CATG 1 cut(s) 50
FauI CCCGC 1 cut(s) 169
Fnu4HI GCNGC 1 cut(s) 132
Fsp4HI GCNGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 132
GsuI CTGGAG 1 cut(s) 98
HaeIII GGCC 1 cut(s) 148
Hin1II CATG 1 cut(s) 54
HinfI GANTC 1 cut(s) 122
HphI GGTGA 3 cut(s) 58, 109, 172
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 1 cut(s) 67
Hpy8I GTNNAC 1 cut(s) 163
HpyAV CCTTC 2 cut(s) 22, 148
HpyCH4IV ACGT 1 cut(s) 72
HpyF3I CTNAG 1 cut(s) 186
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 1 cut(s) 54
Kzo9I GATC 1 cut(s) 33
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 2 cut(s) 46, 102
MalI GATC 1 cut(s) 35
MboI GATC 1 cut(s) 33
MhlI GDGCHC 1 cut(s) 185
MlyI GAGTC 1 cut(s) 131
MnlI CCTC 2 cut(s) 61, 112
MspR9I CCNGG 3 cut(s) 17, 56, 113
MvaI CCWGG 3 cut(s) 17, 56, 113
NdeII GATC 1 cut(s) 33
NlaIII CATG 1 cut(s) 54
NlaIV GGNNCC 1 cut(s) 182
NmuCI GTSAC 2 cut(s) 46, 102
NspI RCATGY 1 cut(s) 54
PkrI GCNGC 1 cut(s) 133
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
Psp6I CCWGG 3 cut(s) 15, 54, 111
PspGI CCWGG 3 cut(s) 15, 54, 111
PspN4I GGNNCC 1 cut(s) 182
PspPI GGNCC 1 cut(s) 146
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 1 cut(s) 33
Sau96I GGNCC 1 cut(s) 146
SchI GAGTC 1 cut(s) 131
ScrFI CCNGG 3 cut(s) 17, 56, 113
SduI GDGCHC 1 cut(s) 185
SetI ASST 4 cut(s) 48, 75, 114, 159
SsiI CCGC 5 cut(s) 5, 116, 131, 134, 176
StyD4I CCNGG 3 cut(s) 15, 54, 111
TaiI ACGT 1 cut(s) 75
TaqI TCGA 1 cut(s) 108
TauI GCSGC 1 cut(s) 134
TscAI CASTG 1 cut(s) 156
TseFI GTSAC 2 cut(s) 46, 102
Tsp45I GTSAC 2 cut(s) 46, 102
TspRI CASTG 1 cut(s) 156
XagI CCTNNNNNAGG 1 cut(s) 116
XceI RCATGY 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.