transcription coactivator activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G14045 AT2G14045 AT2G14045 AT2G14045 |
| fragaria_vesca | FvH4_6g02371 |
| malus_domestica | MD12G1244800.v1.1 |
| prunus_persica | Prupe.6G347400_v2.0.a1 |
| pyrus_communis | pycom12g22460 |
| rosa_chinensis | RchiOBHm_Chr3g0450141 |
| rosa_laevigata | RLG00000025752 |
| rosa_multiflora | Rmu_ssc0000116.1_g000067 |
| rosa_samantha | Rh3AG025100 Rh3BG025700 Rh3CG024600 Rh3DG025700 |
| rosa_wichuraiana | Rw3G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 304 |
| AfaI | GTAC | 4 cut(s) | 47, 101, 261, 281 |
| AgsI | TTSAA | 1 cut(s) | 143 |
| AluBI | AGCT | 4 cut(s) | 35, 184, 236, 289 |
| AluI | AGCT | 4 cut(s) | 35, 184, 236, 289 |
| Alw26I | GTCTC | 1 cut(s) | 239 |
| Ama87I | CYCGRG | 1 cut(s) | 131 |
| AoxI | GGCC | 1 cut(s) | 304 |
| AspLEI | GCGC | 1 cut(s) | 130 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| AvaI | CYCGRG | 1 cut(s) | 131 |
| AvaII | GGWCC | 1 cut(s) | 158 |
| BalI | TGGCCA | 1 cut(s) | 306 |
| BccI | CCATC | 1 cut(s) | 169 |
| BciVI | GTATCC | 1 cut(s) | 335 |
| BclI | TGATCA | 1 cut(s) | 334 |
| BcoDI | GTCTC | 1 cut(s) | 239 |
| BfmI | CTRYAG | 2 cut(s) | 185, 206 |
| BfuI | GTATCC | 1 cut(s) | 335 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BmcAI | AGTACT | 1 cut(s) | 47 |
| Bme18I | GGWCC | 1 cut(s) | 158 |
| BmeT110I | CYCGRG | 1 cut(s) | 131 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmsI | GCATC | 1 cut(s) | 61 |
| BsaI | GGTCTC | 1 cut(s) | 239 |
| Bse1I | ACTGG | 2 cut(s) | 57, 249 |
| BseNI | ACTGG | 2 cut(s) | 57, 249 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| BshFI | GGCC | 1 cut(s) | 306 |
| BsiHKCI | CYCGRG | 1 cut(s) | 131 |
| BsmAI | GTCTC | 1 cut(s) | 239 |
| BsnI | GGCC | 1 cut(s) | 306 |
| Bso31I | GGTCTC | 1 cut(s) | 239 |
| BsoBI | CYCGRG | 1 cut(s) | 131 |
| Bsp143I | GATC | 2 cut(s) | 202, 334 |
| BspANI | GGCC | 1 cut(s) | 306 |
| BspMAI | CTGCAG | 1 cut(s) | 210 |
| BspTNI | GGTCTC | 1 cut(s) | 239 |
| BsrI | ACTGG | 2 cut(s) | 57, 249 |
| BssMI | GATC | 2 cut(s) | 202, 334 |
| BstHHI | GCGC | 1 cut(s) | 130 |
| BstKTI | GATC | 2 cut(s) | 205, 337 |
| BstMAI | GTCTC | 1 cut(s) | 239 |
| BstMBI | GATC | 2 cut(s) | 202, 334 |
| BstNSI | RCATGY | 1 cut(s) | 324 |
| BstSFI | CTRYAG | 2 cut(s) | 185, 206 |
| BstX2I | RGATCY | 1 cut(s) | 202 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 202 |
| BsuI | GTATCC | 1 cut(s) | 335 |
| BsuRI | GGCC | 1 cut(s) | 306 |
| BtsI | GCAGTG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 3 cut(s) | 64, 256, 307 |
| CfoI | GCGC | 1 cut(s) | 130 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| Csp6I | GTAC | 4 cut(s) | 46, 100, 260, 280 |
| CviAII | CATG | 1 cut(s) | 321 |
| CviJI | RGCY | 7 cut(s) | 35, 118, 184, 191, 236, 289, 306 |
| CviKI_1 | RGCY | 7 cut(s) | 35, 118, 184, 191, 236, 289, 306 |
| CviQI | GTAC | 4 cut(s) | 46, 100, 260, 280 |
| DpnI | GATC | 2 cut(s) | 204, 336 |
| DpnII | GATC | 2 cut(s) | 202, 334 |
| EaeI | YGGCCR | 1 cut(s) | 304 |
| Eco31I | GGTCTC | 1 cut(s) | 239 |
| Eco47I | GGWCC | 1 cut(s) | 158 |
| Eco88I | CYCGRG | 1 cut(s) | 131 |
| FaeI | CATG | 1 cut(s) | 324 |
| FaiI | YATR | 3 cut(s) | 177, 219, 322 |
| FatI | CATG | 1 cut(s) | 320 |
| FbaI | TGATCA | 1 cut(s) | 334 |
| GlaI | GCGC | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 306 |
| HhaI | GCGC | 1 cut(s) | 130 |
| Hin1II | CATG | 1 cut(s) | 324 |
| Hin6I | GCGC | 1 cut(s) | 128 |
| HinP1I | GCGC | 1 cut(s) | 128 |
| HindIII | AAGCTT | 1 cut(s) | 33 |
| HinfI | GANTC | 1 cut(s) | 53 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy188I | TCNGA | 2 cut(s) | 172, 202 |
| Hpy188III | TCNNGA | 3 cut(s) | 40, 68, 332 |
| HpyAV | CCTTC | 3 cut(s) | 129, 280, 338 |
| HpyCH4V | TGCA | 4 cut(s) | 95, 208, 254, 320 |
| Hsp92II | CATG | 1 cut(s) | 324 |
| HspAI | GCGC | 1 cut(s) | 128 |
| Ksp22I | TGATCA | 1 cut(s) | 334 |
| Kzo9I | GATC | 2 cut(s) | 202, 334 |
| LpnPI | CCDG | 4 cut(s) | 25, 70, 173, 262 |
| LweI | GCATC | 1 cut(s) | 61 |
| MalI | GATC | 2 cut(s) | 204, 336 |
| MboI | GATC | 2 cut(s) | 202, 334 |
| MboII | GAAGA | 1 cut(s) | 265 |
| MflI | RGATCY | 1 cut(s) | 202 |
| MlsI | TGGCCA | 1 cut(s) | 306 |
| MluCI | AATT | 1 cut(s) | 194 |
| MluNI | TGGCCA | 1 cut(s) | 306 |
| MnlI | CCTC | 5 cut(s) | 13, 86, 133, 149, 250 |
| Mox20I | TGGCCA | 1 cut(s) | 306 |
| MscI | TGGCCA | 1 cut(s) | 306 |
| Msp20I | TGGCCA | 1 cut(s) | 306 |
| NdeII | GATC | 2 cut(s) | 202, 334 |
| NlaIII | CATG | 1 cut(s) | 324 |
| NspI | RCATGY | 1 cut(s) | 324 |
| PaeR7I | CTCGAG | 1 cut(s) | 131 |
| PfeI | GAWTC | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| PspXI | VCTCGAGB | 1 cut(s) | 131 |
| PstI | CTGCAG | 1 cut(s) | 210 |
| PsuI | RGATCY | 1 cut(s) | 202 |
| RsaI | GTAC | 4 cut(s) | 47, 101, 261, 281 |
| RsaNI | GTAC | 4 cut(s) | 46, 100, 260, 280 |
| Sau3AI | GATC | 2 cut(s) | 202, 334 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| ScaI | AGTACT | 1 cut(s) | 47 |
| SetI | ASST | 6 cut(s) | 37, 160, 186, 238, 261, 291 |
| SfaNI | GCATC | 1 cut(s) | 61 |
| SfcI | CTRYAG | 2 cut(s) | 185, 206 |
| Sfr274I | CTCGAG | 1 cut(s) | 131 |
| SinI | GGWCC | 1 cut(s) | 158 |
| SlaI | CTCGAG | 1 cut(s) | 131 |
| SmlI | CTYRAG | 1 cut(s) | 131 |
| SmoI | CTYRAG | 1 cut(s) | 131 |
| Sse9I | AATT | 1 cut(s) | 194 |
| TaqI | TCGA | 1 cut(s) | 132 |
| TasI | AATT | 1 cut(s) | 194 |
| TatI | WGTACW | 2 cut(s) | 45, 279 |
| TfiI | GAWTC | 1 cut(s) | 53 |
| TscAI | CASTG | 3 cut(s) | 64, 256, 307 |
| TspDTI | ATGAA | 2 cut(s) | 192, 227 |
| TspRI | CASTG | 3 cut(s) | 64, 256, 307 |
| VpaK11BI | GGWCC | 1 cut(s) | 158 |
| XceI | RCATGY | 1 cut(s) | 324 |
| XhoI | CTCGAG | 1 cut(s) | 131 |
| ZrmI | AGTACT | 1 cut(s) | 47 |