DNA-directed RNA polymerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14660 AT4G14660 AT4G14660 |
| fragaria_vesca | FvH4_4g12050 FvH4_4g12050 |
| malus_domestica | MD16G1207700.v1.1 |
| prunus_persica | Prupe.1G030000_v2.0.a1 Prupe.1G030000_v2.0.a1 Prupe.1G030000_v2.0.a1 Prupe.1G030000_v2.0.a1 |
| pyrus_communis | pycom13g17890 pycom16g17510 |
| rosa_chinensis | RchiOBHm_Chr4g0390271 RchiOBHm_Chr4g0390761 |
| rosa_laevigata | RLG00000009929 |
| rosa_multiflora | Rmu_sc0004432.1_g000009 Rmu_sc0014620.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00336390 |
| rosa_rugosa | Rorug03G0328900 |
| rosa_samantha | Rh4AG031300 Rh4AG033100 Rh4BG025300 Rh4CG034300 Rh4DG026500 |
| rosa_wichuraiana | Rw4G002490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 196 |
| AcsI | RAATTY | 1 cut(s) | 137 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 185 |
| AgsI | TTSAA | 2 cut(s) | 46, 125 |
| AjnI | CCWGG | 1 cut(s) | 22 |
| AlwI | GGATC | 1 cut(s) | 196 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| AspS9I | GGNCC | 2 cut(s) | 111, 176 |
| AvaII | GGWCC | 2 cut(s) | 111, 176 |
| BciT130I | CCWGG | 1 cut(s) | 24 |
| Bme1390I | CCNGG | 1 cut(s) | 24 |
| Bme18I | GGWCC | 2 cut(s) | 111, 176 |
| BmgT120I | GGNCC | 2 cut(s) | 111, 176 |
| BmiI | GGNNCC | 1 cut(s) | 112 |
| BmrFI | CCNGG | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 185 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| Bse3DI | GCAATG | 1 cut(s) | 99 |
| BseBI | CCWGG | 1 cut(s) | 24 |
| BseDI | CCNNGG | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BseMI | GCAATG | 1 cut(s) | 99 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 185 |
| Bsp143I | GATC | 1 cut(s) | 188 |
| BspLI | GGNNCC | 1 cut(s) | 112 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BsrDI | GCAATG | 1 cut(s) | 99 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssECI | CCNNGG | 1 cut(s) | 23 |
| BssMI | GATC | 1 cut(s) | 188 |
| Bst2UI | CCWGG | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 2 cut(s) | 14, 91 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstKTI | GATC | 1 cut(s) | 191 |
| BstMBI | GATC | 1 cut(s) | 188 |
| BstNI | CCWGG | 1 cut(s) | 24 |
| BstSCI | CCNGG | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 2 cut(s) | 111, 176 |
| CviAII | CATG | 1 cut(s) | 173 |
| CviJI | RGCY | 2 cut(s) | 121, 146 |
| CviKI_1 | RGCY | 2 cut(s) | 121, 146 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 190 |
| DpnII | GATC | 1 cut(s) | 188 |
| Eco47I | GGWCC | 2 cut(s) | 111, 176 |
| EcoRII | CCWGG | 1 cut(s) | 22 |
| FaeI | CATG | 1 cut(s) | 176 |
| FaiI | YATR | 2 cut(s) | 18, 174 |
| FatI | CATG | 1 cut(s) | 172 |
| Hin1II | CATG | 1 cut(s) | 176 |
| HinfI | GANTC | 2 cut(s) | 31, 55 |
| Hpy166II | GTNNAC | 1 cut(s) | 158 |
| Hpy188III | TCNNGA | 1 cut(s) | 186 |
| Hpy8I | GTNNAC | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 2 cut(s) | 14, 91 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 1 cut(s) | 176 |
| Kzo9I | GATC | 1 cut(s) | 188 |
| LpnPI | CCDG | 6 cut(s) | 9, 18, 36, 128, 171, 192 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MalI | GATC | 1 cut(s) | 190 |
| MboI | GATC | 1 cut(s) | 188 |
| MluCI | AATT | 1 cut(s) | 137 |
| MspR9I | CCNGG | 1 cut(s) | 24 |
| MvaI | CCWGG | 1 cut(s) | 24 |
| NdeII | GATC | 1 cut(s) | 188 |
| NlaIII | CATG | 1 cut(s) | 176 |
| NlaIV | GGNNCC | 1 cut(s) | 112 |
| NmuCI | GTSAC | 1 cut(s) | 85 |
| PfeI | GAWTC | 2 cut(s) | 31, 55 |
| Psp6I | CCWGG | 1 cut(s) | 22 |
| PspGI | CCWGG | 1 cut(s) | 22 |
| PspN4I | GGNNCC | 1 cut(s) | 112 |
| PspPI | GGNCC | 2 cut(s) | 111, 176 |
| Sau3AI | GATC | 1 cut(s) | 188 |
| Sau96I | GGNCC | 2 cut(s) | 111, 176 |
| ScrFI | CCNGG | 1 cut(s) | 24 |
| SetI | ASST | 1 cut(s) | 85 |
| SinI | GGWCC | 2 cut(s) | 111, 176 |
| Sse9I | AATT | 1 cut(s) | 137 |
| StyD4I | CCNGG | 1 cut(s) | 22 |
| TaaI | ACNGT | 2 cut(s) | 14, 91 |
| TasI | AATT | 1 cut(s) | 137 |
| TfiI | GAWTC | 2 cut(s) | 31, 55 |
| TseFI | GTSAC | 1 cut(s) | 85 |
| Tsp45I | GTSAC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 1 cut(s) | 88 |
| VpaK11BI | GGWCC | 2 cut(s) | 111, 176 |
| XapI | RAATTY | 1 cut(s) | 137 |