Rh4AG163600

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
41422489 .. 41444501
22013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG163600.1

Sequence Viewer

Length: 1314 bp
ATGGAACAGAGCATCATTTGGCATTTAGTATGGTACTACACATCCACCGTTGTGGAAGGTAGTGATCGATGGCAGTCCATCAAGAATAGATTACTGGAGATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCACGAATACGAAGTCTATACTTGAAAACCATATTGAGGCAAGATGTTGGGTTTTTTGATAAAGAAATCAACTCTGGAGAAATTGTTGGGAGGATGTCAGGTGATACTGTGCTTATTCAAGAGGCGATGGGCGAGAAGGTAGGGAGTTTCATTCATTTAGTTGCAACGTTCATTGGGGGCTTCGGAATAGCATTTACTAAGGGATGGCTTCTAACCCATGTCATGCTATCCTCTATTCCCCCTGTTGTCTTCACTACTGCTGTCCTGAACCATTTCATGGTGAAATTGGCGTCCCGCGGACAAGCTGCATATTCAGAAGGGGCTACTGTTGTAGAGGAGACAATTGATTCAATCAGAACTGTTGCATCATTCACAGGGGAGAAGCAGACAATATCTAACAACAATGCCTCCGTAACTAAAGCTTACAAGTTGGCTGTGCAAGAGGGTTGGGCGTCTGGTTTGGGTTTTGGTGCGGTTATGCTCATGGTCTCTTGGGAAAGCAACTCCAGCGGAAGTGGTAAATCGACTATAATCTGTTTGATTGAGAGATTCTATGACCCCCGGGCTGGTGAGGTTCTTATTGATGGTGTTAATCTCAAAGAGTTCCAACTAAAATGGATCAGAGTCAGACAGAAAATACGCCTCGTGAGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAACATAACATTGCATATGGAAAGGATGATGCAACTACTGAAGAAATAAAGGCTGCTGCTGAGCTTGCCAATGCTGCAAAATTCATAGATTTACTGCCTCAGGGAATCGACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGCAATTCTGAAGAACCCAAGAATCCTACTGTTAGATGAAGCCACGATAGCCCACCGCTTGAGCACAGTGAGGAATGCTGACACCATTGCTGTAATACATCAAGGAACGATTGCTGAAAAAGGACCGCATTGGGAGCTAATTAGGGATCCTGATGGAGCATATAGCCAGCTTATAAGGTTGCAAGAAACTCGCACTGTGTCAGCTTATAAGCTTCAGCTTCGAAAACTCATGGAATCTCCAGAATACCTGAAGACGGAAAAGGAGCTTTTTCGCTTCTACGGCCAGCAAAAGGCCATGGTGGAAGAGGTAGCCCTCTCTTAA

Protein Analysis

437

Amino Acids

48.66

Weight (kDa)

8.32

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 34 - 208 2.8e-39 ABC transporter transmembrane region
ABC_tran PF00005 215 - 346 3.4e-25 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1166, 1200
AccB7I CCANNNNNTGG 1 cut(s) 412
AccII CGCG 1 cut(s) 432
AciI CCGC 6 cut(s) 430, 432, 608, 645, 1048, 1118
AclI AACGTT 1 cut(s) 302
AclWI GGATC 3 cut(s) 761, 1133, 1146
AcoI YGGCCR 1 cut(s) 1273
AcsI RAATTY 1 cut(s) 896
AcuI CTGAAG 4 cut(s) 876, 1022, 1190, 1262
AcyI GRCGYC 2 cut(s) 425, 587
AfaI GTAC 1 cut(s) 35
AfiI CCNNNNNNNGG 5 cut(s) 171, 412, 701, 1246, 1282
AgsI TTSAA 3 cut(s) 160, 254, 486
AjnI CCWGG 1 cut(s) 786
AleI CACNNNNGTG 1 cut(s) 50
Alw21I GWGCWC 1 cut(s) 1058
Alw26I GTCTC 3 cut(s) 121, 467, 628
AlwI GGATC 3 cut(s) 761, 1133, 1146
Ama87I CYCGRG 1 cut(s) 696
AoxI GGCC 2 cut(s) 1273, 1284
ApeKI GCWGC 5 cut(s) 134, 440, 869, 872, 890
ApoI RAATTY 1 cut(s) 896
ArsI GACNNNNNNTTYG 2 cut(s) 133, 165
Asp700I GAANNNNTTC 1 cut(s) 407
AspS9I GGNCC 1 cut(s) 1115
AsuC2I CCSGG 2 cut(s) 697, 698
AsuHPI GGTGA 4 cut(s) 248, 427, 716, 950
AsuII TTCGAA 1 cut(s) 1213
AvaI CYCGRG 1 cut(s) 696
AvaII GGWCC 1 cut(s) 1115
AxyI CCTNAGG 1 cut(s) 915
BamHI GGATCC 1 cut(s) 1138
BauI CACGAG 1 cut(s) 779
BbsI GAAGAC 2 cut(s) 376, 1250
Bbv12I GWGCWC 1 cut(s) 1058
BbvI GCAGC 5 cut(s) 121, 427, 856, 859, 877
BccI CCATC 6 cut(s) 63, 86, 256, 333, 713, 1139
BceAI ACGGC 1 cut(s) 1288
BcgI CGANNNNNNTGC 2 cut(s) 1163, 1197
BciT130I CCWGG 1 cut(s) 788
BclI TGATCA 1 cut(s) 114
BcnI CCSGG 2 cut(s) 697, 698
BcoDI GTCTC 3 cut(s) 121, 467, 628
BfaI CTAG 1 cut(s) 990
BfmI CTRYAG 1 cut(s) 984
BisI GCNGC 5 cut(s) 135, 441, 870, 873, 891
BlpI GCTNAGC 1 cut(s) 876
BlsI GCNGC 5 cut(s) 136, 442, 871, 874, 892
Bme1390I CCNGG 3 cut(s) 697, 698, 788
Bme18I GGWCC 1 cut(s) 1115
BmeT110I CYCGRG 1 cut(s) 696
BmgT120I GGNCC 1 cut(s) 1115
BmiI GGNNCC 2 cut(s) 792, 1140
BmrFI CCNGG 3 cut(s) 697, 698, 788
BmsI GCATC 3 cut(s) 21, 509, 835
BpiI GAAGAC 2 cut(s) 376, 1250
BpmI CTGGAG 5 cut(s) 116, 141, 231, 625, 1215
Bpu1102I GCTNAGC 1 cut(s) 876
Bpu14I TTCGAA 1 cut(s) 1213
BpuEI CTTGAG 1 cut(s) 1072
BpuMI CCSGG 2 cut(s) 697, 698
Bsa29I ATCGAT 1 cut(s) 67
BsaHI GRCGYC 2 cut(s) 425, 587
BsaI GGTCTC 1 cut(s) 628
BsaJI CCNNGG 4 cut(s) 430, 695, 696, 1287
BsaXI ACNNNNNCTCC 4 cut(s) 204, 234, 527, 557
Bsc4I CCNNNNNNNGG 5 cut(s) 171, 412, 701, 1246, 1282
Bse1I ACTGG 4 cut(s) 99, 124, 794, 811
Bse21I CCTNAGG 1 cut(s) 915
Bse3DI GCAATG 2 cut(s) 825, 1077
BseBI CCWGG 1 cut(s) 788
BseCI ATCGAT 1 cut(s) 67
BseDI CCNNGG 4 cut(s) 430, 695, 696, 1287
BseGI GGATG 5 cut(s) 41, 117, 234, 344, 847
BseLI CCNNNNNNNGG 5 cut(s) 171, 412, 701, 1246, 1282
BseMI GCAATG 2 cut(s) 825, 1077
BseMII CTCAG 3 cut(s) 867, 929, 965
BseNI ACTGG 4 cut(s) 99, 124, 794, 811
BseRI GAGGAG 1 cut(s) 485
BseXI GCAGC 5 cut(s) 121, 427, 856, 859, 877
BsgI GTGCAG 1 cut(s) 120
Bsh1236I CGCG 1 cut(s) 432
BshFI GGCC 2 cut(s) 1275, 1286
BshVI ATCGAT 1 cut(s) 67
BsiHKAI GWGCWC 1 cut(s) 1058
BsiHKCI CYCGRG 1 cut(s) 696
BsiSI CCGG 1 cut(s) 697
BslFI GGGAC 2 cut(s) 412, 978
BslI CCNNNNNNNGG 5 cut(s) 171, 412, 701, 1246, 1282
BsmAI GTCTC 3 cut(s) 121, 467, 628
BsmFI GGGAC 2 cut(s) 412, 978
BsmI GAATGC 1 cut(s) 1072
BsnI GGCC 2 cut(s) 1275, 1286
Bso31I GGTCTC 1 cut(s) 628
BsoBI CYCGRG 1 cut(s) 696
Bsp119I TTCGAA 1 cut(s) 1213
Bsp1286I GDGCHC 1 cut(s) 1058
Bsp143I GATC 4 cut(s) 64, 114, 753, 1138
Bsp1720I GCTNAGC 1 cut(s) 876
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 6 cut(s) 430, 432, 608, 645, 1048, 1118
BspANI GGCC 2 cut(s) 1275, 1286
BspCNI CTCAG 3 cut(s) 868, 928, 964
BspDI ATCGAT 1 cut(s) 67
BspFNI CGCG 1 cut(s) 432
BspLI GGNNCC 2 cut(s) 792, 1140
BspPI GGATC 3 cut(s) 761, 1133, 1146
BspT104I TTCGAA 1 cut(s) 1213
BspTNI GGTCTC 1 cut(s) 628
BsrDI GCAATG 2 cut(s) 825, 1077
BsrI ACTGG 4 cut(s) 99, 124, 794, 811
BssECI CCNNGG 4 cut(s) 430, 695, 696, 1287
BssMI GATC 4 cut(s) 64, 114, 753, 1138
BssNI GRCGYC 2 cut(s) 425, 587
BssSI CACGAG 1 cut(s) 779
BssT1I CCWWGG 1 cut(s) 1287
Bst2BI CACGAG 1 cut(s) 779
Bst2UI CCWGG 1 cut(s) 788
Bst4CI ACNGT 7 cut(s) 49, 244, 463, 496, 1023, 1060, 1189
Bst6I CTCTTC 1 cut(s) 1290
BstACI GRCGYC 2 cut(s) 425, 587
BstBI TTCGAA 1 cut(s) 1213
BstC8I GCNNGC 3 cut(s) 882, 1160, 1277
BstDEI CTNAG 4 cut(s) 333, 876, 915, 951
BstDSI CCRYGG 2 cut(s) 430, 1287
BstF5I GGATG 5 cut(s) 41, 117, 234, 344, 847
BstFNI CGCG 1 cut(s) 432
BstKTI GATC 4 cut(s) 67, 117, 756, 1141
BstMAI GTCTC 3 cut(s) 121, 467, 628
BstMBI GATC 4 cut(s) 64, 114, 753, 1138
BstMWI GCNNNNNNNGC 7 cut(s) 642, 783, 881, 890, 1040, 1126, 1272
BstNI CCWGG 1 cut(s) 788
BstSCI CCNGG 3 cut(s) 695, 696, 786
BstSFI CTRYAG 1 cut(s) 984
BstUI CGCG 1 cut(s) 432
BstV1I GCAGC 5 cut(s) 121, 427, 856, 859, 877
BstV2I GAAGAC 2 cut(s) 376, 1250
BstX2I RGATCY 1 cut(s) 1138
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 1 cut(s) 1138
Bsu15I ATCGAT 1 cut(s) 67
Bsu36I CCTNAGG 1 cut(s) 915
BsuRI GGCC 2 cut(s) 1275, 1286
BsuTUI ATCGAT 1 cut(s) 67
BtgI CCRYGG 2 cut(s) 430, 1287
BtgZI GCGATG 1 cut(s) 275
BtsCI GGATG 5 cut(s) 41, 117, 234, 344, 847
BtsIMutI CAGTG 3 cut(s) 117, 1065, 1185
Cac8I GCNNGC 3 cut(s) 882, 1160, 1277
Cfr13I GGNCC 1 cut(s) 1115
Cfr42I CCGCGG 1 cut(s) 433
Cfr9I CCCGGG 1 cut(s) 696
ClaI ATCGAT 1 cut(s) 67
CseI GACGC 2 cut(s) 414, 576
Csp6I GTAC 1 cut(s) 34
CviAII CATG 7 cut(s) 353, 358, 412, 619, 944, 1222, 1288
CviQI GTAC 1 cut(s) 34
DdeI CTNAG 4 cut(s) 333, 876, 915, 951
DpnI GATC 4 cut(s) 66, 116, 755, 1140
DpnII GATC 4 cut(s) 64, 114, 753, 1138
EaeI YGGCCR 1 cut(s) 1273
Eam1104I CTCTTC 1 cut(s) 1290
EarI CTCTTC 1 cut(s) 1290
Eco130I CCWWGG 1 cut(s) 1287
Eco31I GGTCTC 1 cut(s) 628
Eco47I GGWCC 1 cut(s) 1115
Eco57I CTGAAG 4 cut(s) 876, 1022, 1190, 1262
Eco81I CCTNAGG 1 cut(s) 915
Eco88I CYCGRG 1 cut(s) 696
EcoRII CCWGG 1 cut(s) 786
EcoT14I CCWWGG 1 cut(s) 1287
ErhI CCWWGG 1 cut(s) 1287
FaeI CATG 7 cut(s) 356, 361, 415, 622, 947, 1225, 1291
FaqI GGGAC 2 cut(s) 412, 978
FatI CATG 7 cut(s) 352, 357, 411, 618, 943, 1221, 1287
FauI CCCGC 1 cut(s) 437
FauNDI CATATG 1 cut(s) 832
FbaI TGATCA 1 cut(s) 114
Fnu4HI GCNGC 5 cut(s) 135, 441, 870, 873, 891
FokI GGATG 5 cut(s) 28, 124, 241, 351, 854
Fsp4HI GCNGC 5 cut(s) 135, 441, 870, 873, 891
FspBI CTAG 1 cut(s) 990
GluI GCNGC 5 cut(s) 135, 441, 870, 873, 891
GsuI CTGGAG 5 cut(s) 116, 141, 231, 625, 1215
HaeIII GGCC 2 cut(s) 1275, 1286
HapII CCGG 1 cut(s) 697
HgaI GACGC 2 cut(s) 414, 576
Hin1I GRCGYC 2 cut(s) 425, 587
Hin1II CATG 7 cut(s) 356, 361, 415, 622, 947, 1225, 1291
HindIII AAGCTT 2 cut(s) 555, 1202
HinfI GANTC 6 cut(s) 482, 684, 759, 921, 1014, 1226
HpaII CCGG 1 cut(s) 697
HphI GGTGA 4 cut(s) 248, 427, 716, 950
Hpy166II GTNNAC 1 cut(s) 804
Hpy188I TCNGA 6 cut(s) 320, 451, 491, 758, 764, 1002
Hpy188III TCNNGA 7 cut(s) 82, 210, 254, 400, 781, 1142, 1232
Hpy8I GTNNAC 1 cut(s) 804
HpyAV CCTTC 3 cut(s) 50, 265, 446
HpyCH4III ACNGT 7 cut(s) 49, 244, 463, 496, 1023, 1060, 1189
HpyCH4IV ACGT 1 cut(s) 302
HpyCH4V TGCA 9 cut(s) 137, 299, 443, 500, 574, 830, 848, 893, 1174
HpyF10VI GCNNNNNNNGC 7 cut(s) 642, 783, 881, 890, 1040, 1126, 1272
HpyF3I CTNAG 4 cut(s) 333, 876, 915, 951
HpySE526I ACGT 1 cut(s) 302
Hsp92I GRCGYC 2 cut(s) 425, 587
Hsp92II CATG 7 cut(s) 356, 361, 415, 622, 947, 1225, 1291
Ksp22I TGATCA 1 cut(s) 114
KspI CCGCGG 1 cut(s) 433
Kzo9I GATC 4 cut(s) 64, 114, 753, 1138
LmnI GCTCC 3 cut(s) 1126, 1148, 1255
Lsp1109I GCAGC 5 cut(s) 121, 427, 856, 859, 877
LweI GCATC 3 cut(s) 21, 509, 835
MaeI CTAG 1 cut(s) 990
MaeII ACGT 1 cut(s) 302
MaeIII GTNAC 1 cut(s) 547
MalI GATC 4 cut(s) 66, 116, 755, 1140
MboI GATC 4 cut(s) 64, 114, 753, 1138
MboII GAAGA 5 cut(s) 376, 869, 1015, 1255, 1307
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 1 cut(s) 1138
MhlI GDGCHC 1 cut(s) 1058
MluCI AATT 6 cut(s) 216, 419, 477, 896, 996, 1131
MlyI GAGTC 1 cut(s) 768
MmeI TCCRAC 1 cut(s) 766
MroXI GAANNNNTTC 1 cut(s) 407
MseI TTAA 3 cut(s) 726, 816, 1312
MslI CAYNNNNRTG 1 cut(s) 50
MspA1I CMGCKG 2 cut(s) 432, 645
MspI CCGG 1 cut(s) 697
MspR9I CCNGG 3 cut(s) 697, 698, 788
MunI CAATTG 1 cut(s) 477
Mva1269I GAATGC 1 cut(s) 1072
MvaI CCWGG 1 cut(s) 788
MvnI CGCG 1 cut(s) 432
MwoI GCNNNNNNNGC 7 cut(s) 642, 783, 881, 890, 1040, 1126, 1272
NciI CCSGG 2 cut(s) 697, 698
NcoI CCATGG 1 cut(s) 1287
NdeI CATATG 1 cut(s) 832
NdeII GATC 4 cut(s) 64, 114, 753, 1138
NlaIII CATG 7 cut(s) 356, 361, 415, 622, 947, 1225, 1291
NlaIV GGNNCC 2 cut(s) 792, 1140
NspV TTCGAA 1 cut(s) 1213
OliI CACNNNNGTG 1 cut(s) 50
PctI GAATGC 1 cut(s) 1072
PdmI GAANNNNTTC 1 cut(s) 407
PfeI GAWTC 5 cut(s) 482, 684, 921, 1014, 1226
PflMI CCANNNNNTGG 1 cut(s) 412
PkrI GCNGC 5 cut(s) 136, 442, 871, 874, 892
PleI GAGTC 1 cut(s) 767
PpsI GAGTC 1 cut(s) 767
PsiI TTATAA 2 cut(s) 1166, 1200
Psp1406I AACGTT 1 cut(s) 302
Psp6I CCWGG 1 cut(s) 786
PspGI CCWGG 1 cut(s) 786
PspN4I GGNNCC 2 cut(s) 792, 1140
PspPI GGNCC 1 cut(s) 1115
PsuI RGATCY 1 cut(s) 1138
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
RseI CAYNNNNRTG 1 cut(s) 50
SacII CCGCGG 1 cut(s) 433
SaqAI TTAA 3 cut(s) 726, 816, 1312
SatI GCNGC 5 cut(s) 135, 441, 870, 873, 891
Sau3AI GATC 4 cut(s) 64, 114, 753, 1138
Sau96I GGNCC 1 cut(s) 1115
SchI GAGTC 1 cut(s) 768
ScrFI CCNGG 3 cut(s) 697, 698, 788
SduI GDGCHC 1 cut(s) 1058
SfaNI GCATC 3 cut(s) 21, 509, 835
SfcI CTRYAG 1 cut(s) 984
Sfr303I CCGCGG 1 cut(s) 433
SfuI TTCGAA 1 cut(s) 1213
SgrBI CCGCGG 1 cut(s) 433
SinI GGWCC 1 cut(s) 1115
SmaI CCCGGG 1 cut(s) 698
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 1 cut(s) 1051
SmoI CTYRAG 1 cut(s) 1051
Sse9I AATT 6 cut(s) 216, 419, 477, 896, 996, 1131
SsiI CCGC 6 cut(s) 430, 432, 608, 645, 1048, 1118
SspMI CTAG 1 cut(s) 990
StyD4I CCNGG 3 cut(s) 695, 696, 786
StyI CCWWGG 1 cut(s) 1287
TaaI ACNGT 7 cut(s) 49, 244, 463, 496, 1023, 1060, 1189
TaiI ACGT 1 cut(s) 305
TaqI TCGA 4 cut(s) 67, 659, 924, 1213
TasI AATT 6 cut(s) 216, 419, 477, 896, 996, 1131
TfiI GAWTC 5 cut(s) 482, 684, 921, 1014, 1226
Tru1I TTAA 3 cut(s) 726, 816, 1312
Tru9I TTAA 3 cut(s) 726, 816, 1312
TscAI CASTG 3 cut(s) 124, 1065, 1192
TseI GCWGC 5 cut(s) 134, 440, 869, 872, 890
TspDTI ATGAA 6 cut(s) 274, 278, 295, 400, 889, 1044
TspGWI ACGGA 2 cut(s) 535, 1262
TspMI CCCGGG 1 cut(s) 696
TspRI CASTG 3 cut(s) 124, 1065, 1192
Van91I CCANNNNNTGG 1 cut(s) 412
VpaK11BI GGWCC 1 cut(s) 1115
XapI RAATTY 1 cut(s) 896
XmaI CCCGGG 1 cut(s) 696
XmnI GAANNNNTTC 1 cut(s) 407
XspI CTAG 1 cut(s) 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.