Rh4AG342600

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0014902
Physical Location & Seq
Reverse (-)
65092382 .. 65094065
1684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG342600.1

Sequence Viewer

Length: 1479 bp
ATGGCCCAGATGGGTTTTCTCTGCCACTACATTCTCTTTGCTTTCCTTTCTTACTCTGCTCACTCCCGCAACTTACCGGCGGCCACCACCACCTCCAAAACGACGGTTCTCGACGTTGCCGCTTCCATTCAGGAGGCCCTAAACGCCATGTCGTCCGAGCACTACTCTTACAGTGGAGCCACTCAGTCATTGAGCCAAGAACCCCAAACCTTGTCAGTTTCATCTTCACTCTCTCTTCAGCTACATTCCCGAATTTCACTCCACCAGCATTCTCACAACGACTACAAGTCGCTCACTTTGGCTCGACTTGGGCGCGACTCCGCCCGCGTCAGATCTCTAACCACCAGGTTAGATCTGGCGGTTAGAGGCATTGCCACGTCGGATCTCAAACCCGTCGATACCCAACATTTCGGTACCGACGGGTTCGAGAGCCCCGTGGTTTCGGGGACGAGTGAGGGCAGCGGCGAGTACTTCTCCCGAGTCGGAATCGGCAAACCGCCCAGCCAGGTCTACGTGGTGCTCGACACGGGCAGTGACGTCAGCTGGGTCCAATGCGCGCCGTGCGCCGACTGTTACCAGCAAGCCGACCCCATTTTCGAGCCGGATTCCTCGGCTTCTTTCGCGCCGCTGTCGTGCGAGACCCGGCAGTGCAAGTCCCTTGACGTGTTCGAGTGCCGCAACAACACGTGTCTCTACGAGGTGGCCTACGGCGACGGCTCCTACACCGTCGGCGACTTCGTGACGGAGACGATCAGCATCGGCGCCGAGTCGGTGAAAAACGTTGCCATTGGATGTGGGCATAACAACGAAGGACTGTTTGTCGGTGCGGCTGGCTTGCTCGGGCTCGGCGGGGGGCCGTTGTCGTTTCCTTCCCAGCTCAACGCCACGTCGTTTTCGTATTGCCTCGTCGACCGTGACTCTGACTCGGCCGCGACTCTAGAATTCAACTCTGCAATCCCTCGCAACGCCGTCACGGCCCCGTTACGGCGCAACCCCCAGCTCGACACTTTCTACTACGTCGGACTGACCGGAATCAGCGTCGGCGGAGATATGCTTAAGATTCCCGATACGGCGTTCCTGATAGACGAGAACGGAGATGGCGGAATCATCATCGACTCCGGCACGGCGGTGACCAGGCTCCAGACGGACACCTACGACGCGCTCCGTAGCGCGTTCGTGAACGGCACGAAGGGGCTGCAGTCCACGAGCGGCGTGGCGCTGTTCGACGCGTGCTACGACCTGTCGTCGAAGAAGAGCGTGGAAGTACCAACGCTGTCGTTTCACTTCGAGGACGGGAAAGTGTTACCGTTGCCGGCGAAGAATTACCTGATTCCGGTGGACTCGCAGGGGACGTTCTGCTTTGCGTTCGCACCGACGAGCTCGGCGCTGTCCATAATCGGAAACGTGCAGCAGCAAGGGACACGTGTCAGTTTCGACATAGCTAATTCGGTGGTTGGATTCTCTCCTGACCAATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

492

Amino Acids

52.35

Weight (kDa)

4.83

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 156 - 283 1.8e-11 Eukaryotic aspartyl protease
TAXi_N PF14543 157 - 313 2e-48 Xylanase inhibitor N-terminal
Asp PF00026 335 - 488 8.3e-08 Eukaryotic aspartyl protease
TAXi_C PF14541 338 - 488 3.9e-38 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014902)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25510
fragaria_vesca FvH4_4g27770
malus_domestica MD13G1044900.v1.1
prunus_persica Prupe.1G307100_v2.0.a1
pyrus_communis pycom13g03970 pycom16g04080
rosa_chinensis RchiOBHm_Chr4g0435631
rosa_laevigata RLG00000006575
rosa_multiflora Rmu_sc0000051.1_g000004
rosa_roxburghii Rroxscaffold_5G00376850
rosa_rugosa Rorug04G0287400
rosa_samantha Rh4AG342600 Rh4BG350900 Rh4CG365600 Rh4DG345300
rosa_wichuraiana Rw4G029900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 540
Acc65I GGTACC 1 cut(s) 413
AccB1I GGYRCC 2 cut(s) 413, 761
AccBSI CCGCTC 1 cut(s) 1209
AccI GTMKAC 2 cut(s) 510, 909
AccII CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
AclI AACGTT 1 cut(s) 780
AclWI GGATC 1 cut(s) 390
AcoI YGGCCR 2 cut(s) 81, 927
AcsI RAATTY 2 cut(s) 252, 941
AcuI CTGAAG 1 cut(s) 221
AcvI CACGTG 2 cut(s) 687, 1424
AcyI GRCGYC 2 cut(s) 537, 762
AfaI GTAC 3 cut(s) 415, 470, 1266
AfiI CCNNNNNNNGG 2 cut(s) 984, 1333
AflII CTTAAG 1 cut(s) 1055
AflIII ACRYGT 6 cut(s) 663, 684, 686, 1227, 1421, 1423
AgsI TTSAA 1 cut(s) 946
AhdI GACNNNNNGTC 3 cut(s) 286, 818, 1243
AjiI CACGTC 3 cut(s) 378, 664, 888
AjnI CCWGG 3 cut(s) 344, 504, 1133
AleI CACNNNNGTG 1 cut(s) 1127
AluBI AGCT 6 cut(s) 241, 543, 877, 1000, 1380, 1442
AluI AGCT 6 cut(s) 241, 543, 877, 1000, 1380, 1442
Alw21I GWGCWC 3 cut(s) 162, 522, 1382
Alw26I GTCTC 3 cut(s) 632, 695, 740
AlwI GGATC 1 cut(s) 390
Ama87I CYCGRG 2 cut(s) 477, 839
AoxI GGCC 7 cut(s) 3, 81, 135, 702, 854, 927, 975
ApeKI GCWGC 4 cut(s) 459, 1195, 1408, 1411
ApoI RAATTY 2 cut(s) 252, 941
ArsI GACNNNNNNTTYG 2 cut(s) 578, 610
Asp718I GGTACC 1 cut(s) 413
AspS9I GGNCC 5 cut(s) 4, 136, 547, 854, 976
AsuC2I CCSGG 1 cut(s) 643
AsuHPI GGTGA 2 cut(s) 784, 1141
AvaI CYCGRG 2 cut(s) 477, 839
AvaII GGWCC 1 cut(s) 547
BanI GGYRCC 2 cut(s) 413, 761
BanII GRGCYC 3 cut(s) 434, 846, 1382
BauI CACGAG 1 cut(s) 1204
BbrPI CACGTG 2 cut(s) 687, 1424
Bbv12I GWGCWC 3 cut(s) 162, 522, 1382
BbvI GCAGC 4 cut(s) 471, 1182, 1420, 1423
BccI CCATC 2 cut(s) 4, 1091
BcgI CGANNNNNNTGC 2 cut(s) 1177, 1211
BciT130I CCWGG 3 cut(s) 346, 506, 1135
BcnI CCSGG 1 cut(s) 643
BcoDI GTCTC 3 cut(s) 632, 695, 740
BfaI CTAG 2 cut(s) 938, 1477
BfmI CTRYAG 1 cut(s) 1196
BfoI RGCGCY 3 cut(s) 765, 1220, 1388
BfrI CTTAAG 1 cut(s) 1055
BglI GCCNNNNNGGC 1 cut(s) 974
BglII AGATCT 2 cut(s) 332, 352
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 4 cut(s) 346, 506, 643, 1135
Bme18I GGWCC 1 cut(s) 547
BmeRI GACNNNNNGTC 3 cut(s) 286, 818, 1243
BmeT110I CYCGRG 2 cut(s) 477, 839
BmgBI CACGTC 3 cut(s) 378, 664, 888
BmgT120I GGNCC 5 cut(s) 4, 136, 547, 854, 976
BmiI GGNNCC 8 cut(s) 178, 415, 548, 718, 763, 855, 978, 1139
BmrFI CCNGG 4 cut(s) 346, 506, 643, 1135
BmsI GCATC 1 cut(s) 765
BoxI GACNNNNGTC 1 cut(s) 1424
BplI GAGNNNNNCTC 4 cut(s) 149, 181, 458, 490
BpmI CTGGAG 1 cut(s) 1124
BpuMI CCSGG 1 cut(s) 643
BsaAI YACGTR 3 cut(s) 514, 687, 1424
BsaBI GATNNNNATC 1 cut(s) 755
BsaHI GRCGYC 2 cut(s) 537, 762
BsaI GGTCTC 1 cut(s) 632
BsaJI CCNNGG 2 cut(s) 435, 609
BsaWI WCCGGW 2 cut(s) 1028, 1333
Bsc4I CCNNNNNNNGG 2 cut(s) 984, 1333
Bse118I RCCGGY 2 cut(s) 76, 1312
Bse3DI GCAATG 1 cut(s) 369
Bse8I GATNNNNATC 1 cut(s) 755
BseBI CCWGG 3 cut(s) 346, 506, 1135
BseDI CCNNGG 2 cut(s) 435, 609
BseGI GGATG 1 cut(s) 797
BseJI GATNNNNATC 1 cut(s) 755
BseLI CCNNNNNNNGG 2 cut(s) 984, 1333
BseMI GCAATG 1 cut(s) 369
BseMII CTCAG 1 cut(s) 197
BsePI GCGCGC 1 cut(s) 555
BseX3I CGGCCG 1 cut(s) 927
BseXI GCAGC 4 cut(s) 471, 1182, 1420, 1423
BseYI CCCAGC 4 cut(s) 500, 543, 873, 996
BsgI GTGCAG 1 cut(s) 1427
Bsh1236I CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
Bsh1285I CGRYCG 2 cut(s) 913, 930
BshFI GGCC 7 cut(s) 5, 83, 137, 704, 856, 929, 977
BshNI GGYRCC 2 cut(s) 413, 761
BsiEI CGRYCG 2 cut(s) 913, 930
BsiHKAI GWGCWC 3 cut(s) 162, 522, 1382
BsiHKCI CYCGRG 2 cut(s) 477, 839
BsiSI CCGG 7 cut(s) 77, 602, 643, 1029, 1119, 1313, 1334
BslFI GGGAC 4 cut(s) 460, 640, 1363, 1432
BslI CCNNNNNNNGG 2 cut(s) 984, 1333
BsmAI GTCTC 3 cut(s) 632, 695, 740
BsmBI CGTCTC 1 cut(s) 740
BsmFI GGGAC 4 cut(s) 460, 640, 1363, 1432
BsmI GAATGC 1 cut(s) 268
BsnI GGCC 7 cut(s) 5, 83, 137, 704, 856, 929, 977
Bso31I GGTCTC 1 cut(s) 632
BsoBI CYCGRG 2 cut(s) 477, 839
Bsp1286I GDGCHC 5 cut(s) 162, 434, 522, 846, 1382
Bsp143I GATC 4 cut(s) 332, 352, 382, 750
BspANI GGCC 7 cut(s) 5, 83, 137, 704, 856, 929, 977
BspCNI CTCAG 1 cut(s) 196
BspFNI CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
BspLI GGNNCC 8 cut(s) 178, 415, 548, 718, 763, 855, 978, 1139
BspMAI CTGCAG 1 cut(s) 1200
BspPI GGATC 1 cut(s) 390
BspQI GCTCTTC 1 cut(s) 1247
BspT107I GGYRCC 2 cut(s) 413, 761
BspTI CTTAAG 1 cut(s) 1055
BspTNI GGTCTC 1 cut(s) 632
BsrBI CCGCTC 1 cut(s) 1209
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 2 cut(s) 76, 1312
BssAI RCCGGY 2 cut(s) 76, 1312
BssECI CCNNGG 2 cut(s) 435, 609
BssHII GCGCGC 1 cut(s) 555
BssMI GATC 4 cut(s) 332, 352, 382, 750
BssNI GRCGYC 2 cut(s) 537, 762
BssSI CACGAG 1 cut(s) 1204
Bst2BI CACGAG 1 cut(s) 1204
Bst2UI CCWGG 3 cut(s) 346, 506, 1135
Bst4CI ACNGT 7 cut(s) 106, 173, 572, 727, 816, 914, 1308
Bst6I CTCTTC 2 cut(s) 240, 1247
BstACI GRCGYC 2 cut(s) 537, 762
BstAFI CTTAAG 1 cut(s) 1055
BstBAI YACGTR 3 cut(s) 514, 687, 1424
BstC8I GCNNGC 7 cut(s) 325, 557, 582, 832, 836, 1231, 1314
BstDEI CTNAG 1 cut(s) 183
BstDSI CCRYGG 1 cut(s) 435
BstEII GGTNACC 1 cut(s) 1129
BstF5I GGATG 1 cut(s) 797
BstFNI CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
BstH2I RGCGCY 3 cut(s) 765, 1220, 1388
BstKTI GATC 4 cut(s) 335, 355, 385, 753
BstMAI GTCTC 3 cut(s) 632, 695, 740
BstMBI GATC 4 cut(s) 332, 352, 382, 750
BstMCI CGRYCG 2 cut(s) 913, 930
BstMWI GCNNNNNNNGC 5 cut(s) 143, 561, 563, 620, 974
BstNI CCWGG 3 cut(s) 346, 506, 1135
BstPAI GACNNNNGTC 1 cut(s) 1424
BstPI GGTNACC 1 cut(s) 1129
BstSCI CCNGG 4 cut(s) 344, 504, 641, 1133
BstSFI CTRYAG 1 cut(s) 1196
BstUI CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
BstV1I GCAGC 4 cut(s) 471, 1182, 1420, 1423
BstX2I RGATCY 3 cut(s) 332, 352, 382
BstYI RGATCY 3 cut(s) 332, 352, 382
BstZI CGGCCG 1 cut(s) 927
BsuRI GGCC 7 cut(s) 5, 83, 137, 704, 856, 929, 977
BtgI CCRYGG 1 cut(s) 435
BtrI CACGTC 3 cut(s) 378, 664, 888
BtsCI GGATG 1 cut(s) 797
BtsI GCAGTG 2 cut(s) 538, 653
BtsIMutI CAGTG 3 cut(s) 178, 538, 653
Cac8I GCNNGC 7 cut(s) 325, 557, 582, 832, 836, 1231, 1314
Cfr10I RCCGGY 2 cut(s) 76, 1312
Cfr13I GGNCC 5 cut(s) 4, 136, 547, 854, 976
CseI GACGC 4 cut(s) 316, 1027, 1166, 1235
CsiI ACCWGGT 1 cut(s) 344
Csp6I GTAC 3 cut(s) 414, 469, 1265
CviAII CATG 1 cut(s) 148
CviQI GTAC 3 cut(s) 414, 469, 1265
DdeI CTNAG 1 cut(s) 183
DinI GGCGCC 1 cut(s) 763
DpnI GATC 4 cut(s) 334, 354, 384, 752
DpnII GATC 4 cut(s) 332, 352, 382, 750
DriI GACNNNNNGTC 3 cut(s) 286, 818, 1243
EaeI YGGCCR 2 cut(s) 81, 927
EagI CGGCCG 1 cut(s) 927
Eam1104I CTCTTC 2 cut(s) 240, 1247
Eam1105I GACNNNNNGTC 3 cut(s) 286, 818, 1243
EarI CTCTTC 2 cut(s) 240, 1247
EciI GGCGGA 3 cut(s) 310, 1059, 1116
Ecl136II GAGCTC 1 cut(s) 1380
EclXI CGGCCG 1 cut(s) 927
Eco24I GRGCYC 3 cut(s) 434, 846, 1382
Eco31I GGTCTC 1 cut(s) 632
Eco47I GGWCC 1 cut(s) 547
Eco52I CGGCCG 1 cut(s) 927
Eco53kI GAGCTC 1 cut(s) 1380
Eco57I CTGAAG 1 cut(s) 221
Eco72I CACGTG 2 cut(s) 687, 1424
Eco88I CYCGRG 2 cut(s) 477, 839
Eco91I GGTNACC 1 cut(s) 1129
EcoICRI GAGCTC 1 cut(s) 1380
EcoO109I RGGNCCY 1 cut(s) 136
EcoO65I GGTNACC 1 cut(s) 1129
EcoRI GAATTC 1 cut(s) 941
EcoRII CCWGG 3 cut(s) 344, 504, 1133
EcoT38I GRGCYC 3 cut(s) 434, 846, 1382
EgeI GGCGCC 1 cut(s) 763
EheI GGCGCC 1 cut(s) 763
Esp3I CGTCTC 1 cut(s) 740
FaeI CATG 1 cut(s) 151
FaiI YATR 5 cut(s) 149, 801, 1052, 1394, 1439
FaqI GGGAC 4 cut(s) 460, 640, 1363, 1432
FatI CATG 1 cut(s) 147
FauI CCCGC 3 cut(s) 74, 332, 842
FblI GTMKAC 2 cut(s) 510, 909
FokI GGATG 1 cut(s) 804
FriOI GRGCYC 3 cut(s) 434, 846, 1382
FspBI CTAG 2 cut(s) 938, 1477
GsaI CCCAGC 4 cut(s) 504, 547, 877, 1000
GsuI CTGGAG 1 cut(s) 1124
HaeII RGCGCY 3 cut(s) 765, 1220, 1388
HaeIII GGCC 7 cut(s) 5, 83, 137, 704, 856, 929, 977
HapII CCGG 7 cut(s) 77, 602, 643, 1029, 1119, 1313, 1334
HgaI GACGC 4 cut(s) 316, 1027, 1166, 1235
Hin1I GRCGYC 2 cut(s) 537, 762
Hin1II CATG 1 cut(s) 151
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HpaII CCGG 7 cut(s) 77, 602, 643, 1029, 1119, 1313, 1334
HphI GGTGA 2 cut(s) 784, 1141
Hpy166II GTNNAC 5 cut(s) 511, 910, 1180, 1203, 1339
Hpy188I TCNGA 7 cut(s) 157, 332, 382, 485, 922, 1022, 1400
Hpy8I GTNNAC 5 cut(s) 511, 910, 1180, 1203, 1339
HpyAV CCTTC 3 cut(s) 803, 879, 1183
HpyCH4III ACNGT 7 cut(s) 106, 173, 572, 727, 816, 914, 1308
HpyCH4V TGCA 4 cut(s) 651, 953, 1198, 1408
HpyF10VI GCNNNNNNNGC 5 cut(s) 143, 561, 563, 620, 974
HpyF3I CTNAG 1 cut(s) 183
Hsp92I GRCGYC 2 cut(s) 537, 762
Hsp92II CATG 1 cut(s) 151
KasI GGCGCC 1 cut(s) 761
KpnI GGTACC 1 cut(s) 417
KroI GCCGGC 1 cut(s) 1312
KroNI GCCGGC 1 cut(s) 1314
Kzo9I GATC 4 cut(s) 332, 352, 382, 750
LguI GCTCTTC 1 cut(s) 1247
LmnI GCTCC 4 cut(s) 176, 722, 1143, 1167
Lsp1109I GCAGC 4 cut(s) 471, 1182, 1420, 1423
LweI GCATC 1 cut(s) 765
MabI ACCWGGT 1 cut(s) 344
MaeI CTAG 2 cut(s) 938, 1477
MaeIII GTNAC 8 cut(s) 533, 572, 739, 914, 970, 981, 1129, 1302
MalI GATC 4 cut(s) 334, 354, 384, 752
MbiI CCGCTC 1 cut(s) 1209
MboI GATC 4 cut(s) 332, 352, 382, 750
MboII GAAGA 5 cut(s) 216, 227, 1261, 1264, 1330
MflI RGATCY 3 cut(s) 332, 352, 382
MhlI GDGCHC 5 cut(s) 162, 434, 522, 846, 1382
MluCI AATT 4 cut(s) 252, 941, 1321, 1444
MluI ACGCGT 1 cut(s) 1227
Mly113I GGCGCC 1 cut(s) 762
MlyI GAGTC 8 cut(s) 311, 489, 776, 911, 917, 928, 1109, 1334
MmeI TCCRAC 4 cut(s) 360, 463, 1000, 1435
MnlI CCTC 9 cut(s) 103, 127, 359, 448, 619, 691, 914, 969, 1282
MroNI GCCGGC 1 cut(s) 1312
MseI TTAA 1 cut(s) 1056
MslI CAYNNNNRTG 1 cut(s) 1127
MspA1I CMGCKG 3 cut(s) 462, 543, 628
MspCI CTTAAG 1 cut(s) 1055
MspI CCGG 7 cut(s) 77, 602, 643, 1029, 1119, 1313, 1334
MspR9I CCNGG 4 cut(s) 346, 506, 643, 1135
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 3 cut(s) 346, 506, 1135
MvnI CGCG 8 cut(s) 315, 327, 557, 623, 932, 1160, 1172, 1229
MwoI GCNNNNNNNGC 5 cut(s) 143, 561, 563, 620, 974
NaeI GCCGGC 1 cut(s) 1314
NarI GGCGCC 1 cut(s) 762
NciI CCSGG 1 cut(s) 643
NdeII GATC 4 cut(s) 332, 352, 382, 750
NgoMIV GCCGGC 1 cut(s) 1312
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 8 cut(s) 178, 415, 548, 718, 763, 855, 978, 1139
NmeAIII GCCGAG 5 cut(s) 590, 790, 825, 905, 1361
NmuCI GTSAC 5 cut(s) 533, 739, 914, 970, 1129
OliI CACNNNNGTG 1 cut(s) 1127
PauI GCGCGC 1 cut(s) 555
PciSI GCTCTTC 1 cut(s) 1247
PcsI WCGNNNNNNNCGW 6 cut(s) 432, 519, 735, 893, 1233, 1349
PctI GAATGC 1 cut(s) 268
PdiI GCCGGC 1 cut(s) 1314
PfeI GAWTC 7 cut(s) 486, 605, 1032, 1060, 1104, 1330, 1458
PleI GAGTC 8 cut(s) 311, 488, 775, 911, 917, 928, 1109, 1334
PluTI GGCGCC 1 cut(s) 765
PmaCI CACGTG 2 cut(s) 687, 1424
PmlI CACGTG 2 cut(s) 687, 1424
PpsI GAGTC 8 cut(s) 311, 488, 775, 911, 917, 928, 1109, 1334
Ppu21I YACGTR 3 cut(s) 514, 687, 1424
PshAI GACNNNNGTC 1 cut(s) 1424
Psp124BI GAGCTC 1 cut(s) 1382
Psp1406I AACGTT 1 cut(s) 780
Psp6I CCWGG 3 cut(s) 344, 504, 1133
PspCI CACGTG 2 cut(s) 687, 1424
PspEI GGTNACC 1 cut(s) 1129
PspFI CCCAGC 4 cut(s) 500, 543, 873, 996
PspGI CCWGG 3 cut(s) 344, 504, 1133
PspN4I GGNNCC 8 cut(s) 178, 415, 548, 718, 763, 855, 978, 1139
PspPI GGNCC 5 cut(s) 4, 136, 547, 854, 976
PstI CTGCAG 1 cut(s) 1200
PsuI RGATCY 3 cut(s) 332, 352, 382
PteI GCGCGC 1 cut(s) 555
PvuII CAGCTG 1 cut(s) 543
RsaI GTAC 3 cut(s) 415, 470, 1266
RsaNI GTAC 3 cut(s) 414, 469, 1265
RseI CAYNNNNRTG 1 cut(s) 1127
SacI GAGCTC 1 cut(s) 1382
SalI GTCGAC 1 cut(s) 908
SapI GCTCTTC 1 cut(s) 1247
SaqAI TTAA 1 cut(s) 1056
Sau3AI GATC 4 cut(s) 332, 352, 382, 750
Sau96I GGNCC 5 cut(s) 4, 136, 547, 854, 976
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 8 cut(s) 311, 489, 776, 911, 917, 928, 1109, 1334
ScrFI CCNGG 4 cut(s) 346, 506, 643, 1135
SduI GDGCHC 5 cut(s) 162, 434, 522, 846, 1382
SexAI ACCWGGT 1 cut(s) 344
SfaNI GCATC 1 cut(s) 765
SfcI CTRYAG 1 cut(s) 1196
SfoI GGCGCC 1 cut(s) 763
SinI GGWCC 1 cut(s) 547
SmiMI CAYNNNNRTG 1 cut(s) 1127
SmlI CTYRAG 1 cut(s) 1055
SmoI CTYRAG 1 cut(s) 1055
Sse9I AATT 4 cut(s) 252, 941, 1321, 1444
SspDI GGCGCC 1 cut(s) 761
SspMI CTAG 2 cut(s) 938, 1477
SstI GAGCTC 1 cut(s) 1382
StyD4I CCNGG 4 cut(s) 344, 504, 641, 1133
TaaI ACNGT 7 cut(s) 106, 173, 572, 727, 816, 914, 1308
TasI AATT 4 cut(s) 252, 941, 1321, 1444
TatI WGTACW 1 cut(s) 468
TauI GCSGC 8 cut(s) 83, 122, 465, 628, 678, 830, 932, 1212
TfiI GAWTC 7 cut(s) 486, 605, 1032, 1060, 1104, 1330, 1458
Tru1I TTAA 1 cut(s) 1056
Tru9I TTAA 1 cut(s) 1056
TscAI CASTG 3 cut(s) 178, 538, 653
TseFI GTSAC 5 cut(s) 533, 739, 914, 970, 1129
TseI GCWGC 4 cut(s) 459, 1195, 1408, 1411
Tsp45I GTSAC 5 cut(s) 533, 739, 914, 970, 1129
TspDTI ATGAA 1 cut(s) 210
TspGWI ACGGA 4 cut(s) 758, 1107, 1154, 1160
TspRI CASTG 3 cut(s) 178, 538, 653
Vha464I CTTAAG 1 cut(s) 1055
VpaK11BI GGWCC 1 cut(s) 547
XapI RAATTY 2 cut(s) 252, 941
XbaI TCTAGA 1 cut(s) 937
XcmI CCANNNNNNNNNTGG 2 cut(s) 352, 1210
XmiI GTMKAC 2 cut(s) 510, 909
XspI CTAG 2 cut(s) 938, 1477
ZraI GACGTC 1 cut(s) 538
ZrmI AGTACT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.