Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0015883

Physical Location & Seq

Genomic Coordinates Reverse (-)

55318182 .. 55321301

Gene Structure 3120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG402300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGCGGTAATAGCATCATTAGGCTTCAACCTCTTCTCCTCTCTCCCTCCAAATTCTCAACCAAGCGACCCAAATCCCAACGCAACCTCCACCTCAGCTTCGCCGCCGATCCCAATTCCGAAGTACCCGCCTCCGCCGATCAAAAAGCCCCGAAATAATGCTGCTCCTCCCAACCCCGCCCTCAAAAACTTCCACCGCCGCACCAAATACTACAAGCCCGTCCGCGACGGCGTCATCACCACCGACGGCGACCGCGCCGTCGTCATCGGCGAAAACGGCCTGTCGTACCAGCTCCCCGGCGCGCCGTTCGAGTTCCAGTACAGCTACTCGGAGACGCCAAAGGTCAAGCCTTTGGCGATTCGCGAGCCGGCGTTCCTGCCGTTCGCGCCGCCGACAATGCCGCGGCCGTGGACCGGAAAAGCGCCGTTGAAGAGCGCCAAGGAGAAGAAGATGAAGCGGAAAGTCCCGCTCTTTGACTCGTTTAACCCGCCGGCGCCGGGAACCAAAGGAGTGAAGCGGGTCGAAATGCCCGGCCCGTTTGATTTGGGGAAGCGCCCGAAACCCGGTAAAACGCGGGAGGAGATTCTCGGCGAGCCGTTGAAGCGGTGGGAGGTGAAAATGCTCGTCAAGGAGCAGTTGTCCGATAGCCGGCAAGTCAATCTCGGAAGAGATGGATTGACGCATAATATGTTGGATTTGATACATTCGCATTGGAAGAGACGCAGAGTTTGTAGAGTGAAATGTAAAGGTGTTCCAACTGTGGATATGGATAACATTTGCCGCCATATTGAGGAAAGAACTGGGGGGAAGATCATTCATCGAGTTGGTGGTGTAGTCTATCTTTTTCGGGGAAGAAACTATAACTATAATACCCGTCCGCAGTATCCACTGATGCTGTGGAAACCAGCTGCTCCGGTTTATCCCAAACTGATCCAGGAGGCTCCTGAAGGATTGACAAAAGATGAAGCTGAAGAGTTGAGAAAGAAAGGGAAAAGACTCTTGCCTATATGTACATTAGCCAAAAATGGAGTATACATCTCCTTGGTTAGAGATGTTAGGCATGCTTTTGAAGGAAGTTCTTTAGTAAAGGTTGACTGCAAAGGGATGCATGCAAGTGATTACAAAAAGTTGGGTGCTAAGCTTAAGGAATTGGTTCCTTGTGTACTGCTTTCTTTTGATGATGAACAGATATTGATGTGGAGGGGACCAGATTGGGTTTCAATGTCCCAAGAGGTGCCTCCACATTCAGAGTATTCTGATGTTGATATTACAACATCAAAAGCGAGAGTTAAGGATGACGATGATTCTAGTAAGCCAGACACGAAAACAGTGATATCAAGCCCTAAAATGATGTCGCTCTGGAAACACTCAATTGAAACAAACAAAGCATTGTTGCTAGATGAACTTGACCTTGATCCCGATGCTCTCTTGAAGAAGGTTGAGGAATTCGAAGGCATTTCACAGGCCACAGAGCACTCCTATCCAGCATTAATCCTCTCAAGCGAAGATGGCACCAGCAGCTCAATCCAAGTGTATGAAGATGTTCCTCAGAATGGCCCTTATAGCGAATACGAAGACTCGTACAGTGATAACGGTGACGATTATGTATACGATGATGATACCGATGACGATGCGTTATACGATAGTGATTCACCCCCCTTGGGGTCATTACCCGTTGATGTAATAGCAGAGAAACTCGATCATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

569

Amino Acids

63.77

Weight (kDa)

7.18

Isoelectric Point (pI)

52.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	201 - 283	3.3e-17	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	318 - 401	1.7e-14	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23400
fragaria_vesca	FvH4_4g32880
malus_domestica	MD13G1094700.v1.1
prunus_persica	Prupe.1G250700_v2.0.a1
pyrus_communis	pycom13g08250
rosa_chinensis	RchiOBHm_Chr4g0441911
rosa_laevigata	RLG00000006057
rosa_multiflora	Rmu_co8453927.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382720
rosa_rugosa	Rorug04G0336900
rosa_samantha	Rh4AG388600 Rh4BG402300 Rh4CG417400 Rh4DG395600
rosa_wichuraiana	Rw4G033560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	257
AccB1I	GGYRCC	3 cut(s)	493, 1234, 1511
AccBSI	CCGCTC	1 cut(s)	469
AccI	GTMKAC	2 cut(s)	1032, 1608
AccII	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
AclWI	GGATC	3 cut(s)	103, 925, 1409
AcoI	YGGCCR	1 cut(s)	404
AcsI	RAATTY	2 cut(s)	52, 1445
AcuI	CTGAAG	2 cut(s)	966, 990
AcyI	GRCGYC	3 cut(s)	231, 335, 494
AfaI	GTAC	6 cut(s)	125, 287, 320, 1012, 1164, 1583
AfiI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
AflII	CTTAAG	1 cut(s)	1142
AgsI	TTSAA	7 cut(s)	28, 430, 601, 1070, 1221, 1376, 1432
AjnI	CCWGG	1 cut(s)	933
AluBI	AGCT	7 cut(s)	98, 292, 324, 908, 968, 1141, 1521
AluI	AGCT	7 cut(s)	98, 292, 324, 908, 968, 1141, 1521
Alw21I	GWGCWC	1 cut(s)	1476
Alw26I	GTCTC	2 cut(s)	326, 712
AlwI	GGATC	3 cut(s)	103, 925, 1409
AoxI	GGCC	5 cut(s)	277, 404, 532, 1464, 1555
ApeKI	GCWGC	3 cut(s)	161, 908, 1518
ApoI	RAATTY	2 cut(s)	52, 1445
ArsI	GACNNNNNNTTYG	2 cut(s)	711, 743
AscI	GGCGCGCC	1 cut(s)	300
AseI	ATTAAT	1 cut(s)	1490
Asp700I	GAANNNNTTC	2 cut(s)	1152, 1542
AspLEI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
AspS9I	GGNCC	4 cut(s)	411, 533, 1205, 1556
AsuC2I	CCSGG	4 cut(s)	297, 498, 531, 564
AsuHPI	GGTGA	4 cut(s)	229, 625, 1607, 1644
AsuII	TTCGAA	1 cut(s)	1449
AvaII	GGWCC	2 cut(s)	411, 1205
BanI	GGYRCC	3 cut(s)	493, 1234, 1511
BbsI	GAAGAC	1 cut(s)	1581
Bbv12I	GWGCWC	1 cut(s)	1476
BbvCI	CCTCAGC	1 cut(s)	94
BbvI	GCAGC	3 cut(s)	148, 895, 1530
BccI	CCATC	2 cut(s)	665, 1502
BceAI	ACGGC	9 cut(s)	242, 244, 262, 289, 292, 364, 391, 409, 580
BcgI	CGANNNNNNTGC	2 cut(s)	1613, 1647
BciT130I	CCWGG	1 cut(s)	935
BciVI	GTATCC	1 cut(s)	894
BcnI	CCSGG	4 cut(s)	297, 498, 531, 564
BcoDI	GTCTC	2 cut(s)	326, 712
BfaI	CTAG	2 cut(s)	1308, 1397
BfoI	RGCGCY	4 cut(s)	425, 438, 497, 556
BfrI	CTTAAG	1 cut(s)	1142
BfuI	GTATCC	1 cut(s)	894
BisI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
BlpI	GCTNAGC	1 cut(s)	1137
BlsI	GCNGC	9 cut(s)	105, 163, 200, 390, 402, 405, 782, 910, 1520
Bme1390I	CCNGG	5 cut(s)	297, 498, 531, 564, 935
Bme18I	GGWCC	2 cut(s)	411, 1205
BmgT120I	GGNCC	4 cut(s)	411, 533, 1205, 1556
BmiI	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
BmrFI	CCNGG	5 cut(s)	297, 498, 531, 564, 935
BmrI	ACTGGG	1 cut(s)	810
BmsI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
BmuI	ACTGGG	1 cut(s)	810
BpiI	GAAGAC	1 cut(s)	1581
Bpu10I	CCTNAGC	1 cut(s)	94
Bpu1102I	GCTNAGC	1 cut(s)	1137
Bpu14I	TTCGAA	1 cut(s)	1449
BpuEI	CTTGAG	1 cut(s)	1483
BpuMI	CCSGG	4 cut(s)	297, 498, 531, 564
BsaHI	GRCGYC	3 cut(s)	231, 335, 494
BsaJI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BsaWI	WCCGGW	2 cut(s)	413, 913
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 71, 101, 623, 653
Bsc4I	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
Bse118I	RCCGGY	3 cut(s)	367, 490, 648
Bse1I	ACTGG	2 cut(s)	316, 805
BseBI	CCWGG	1 cut(s)	935
BseDI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BseGI	GGATG	2 cut(s)	1110, 1300
BseLI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
BseMII	CTCAG	2 cut(s)	108, 1562
BseNI	ACTGG	2 cut(s)	316, 805
BsePI	GCGCGC	1 cut(s)	300
BseRI	GAGGAG	3 cut(s)	28, 156, 593
BseX3I	CGGCCG	1 cut(s)	404
BseXI	GCAGC	3 cut(s)	148, 895, 1530
Bsh1236I	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
Bsh1285I	CGRYCG	2 cut(s)	253, 407
BshFI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BshNI	GGYRCC	3 cut(s)	493, 1234, 1511
BsiEI	CGRYCG	2 cut(s)	253, 407
BsiHKAI	GWGCWC	1 cut(s)	1476
BsiSI	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
BslFI	GGGAC	3 cut(s)	449, 1210, 1218
BslI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
BsmAI	GTCTC	2 cut(s)	326, 712
BsmBI	CGTCTC	2 cut(s)	326, 712
BsmFI	GGGAC	3 cut(s)	449, 1210, 1218
BsnI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
Bsp119I	TTCGAA	1 cut(s)	1449
Bsp1286I	GDGCHC	1 cut(s)	1476
Bsp1407I	TGTACA	1 cut(s)	1010
Bsp143I	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
Bsp1720I	GCTNAGC	1 cut(s)	1137
Bsp68I	TCGCGA	1 cut(s)	363
BspANI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BspCNI	CTCAG	2 cut(s)	107, 1561
BspFNI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BspHI	TCATGA	1 cut(s)	1702
BspLI	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
BspPI	GGATC	3 cut(s)	103, 925, 1409
BspQI	GCTCTTC	1 cut(s)	425
BspT104I	TTCGAA	1 cut(s)	1449
BspT107I	GGYRCC	3 cut(s)	493, 1234, 1511
BspTI	CTTAAG	1 cut(s)	1142
BsrBI	CCGCTC	1 cut(s)	469
BsrFI	RCCGGY	3 cut(s)	367, 490, 648
BsrGI	TGTACA	1 cut(s)	1010
BsrI	ACTGG	2 cut(s)	316, 805
BssAI	RCCGGY	3 cut(s)	367, 490, 648
BssECI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BssHII	GCGCGC	1 cut(s)	300
BssMI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
BssNAI	GTATAC	2 cut(s)	1033, 1609
BssNI	GRCGYC	3 cut(s)	231, 335, 494
BssT1I	CCWWGG	3 cut(s)	438, 1041, 1659
Bst1107I	GTATAC	2 cut(s)	1033, 1609
Bst2UI	CCWGG	1 cut(s)	935
Bst4CI	ACNGT	4 cut(s)	760, 1330, 1586, 1595
Bst6I	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
BstACI	GRCGYC	3 cut(s)	231, 335, 494
BstAFI	CTTAAG	1 cut(s)	1142
BstAUI	TGTACA	1 cut(s)	1010
BstBI	TTCGAA	1 cut(s)	1449
BstC8I	GCNNGC	8 cut(s)	302, 365, 369, 492, 593, 650, 1062, 1110
BstDEI	CTNAG	3 cut(s)	94, 1137, 1548
BstDSI	CCRYGG	2 cut(s)	401, 407
BstF5I	GGATG	2 cut(s)	1110, 1300
BstFNI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BstH2I	RGCGCY	4 cut(s)	425, 438, 497, 556
BstHHI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
BstKTI	GATC	6 cut(s)	111, 141, 813, 933, 1417, 1702
BstMAI	GTCTC	2 cut(s)	326, 712
BstMBI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
BstMCI	CGRYCG	2 cut(s)	253, 407
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
BstNI	CCWGG	1 cut(s)	935
BstNSI	RCATGY	2 cut(s)	1064, 1112
BstSCI	CCNGG	5 cut(s)	295, 496, 529, 562, 933
BstUI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BstV1I	GCAGC	3 cut(s)	148, 895, 1530
BstV2I	GAAGAC	1 cut(s)	1581
BstZ17I	GTATAC	2 cut(s)	1033, 1609
BstZI	CGGCCG	1 cut(s)	404
BsuI	GTATCC	1 cut(s)	894
BsuRI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BtgI	CCRYGG	2 cut(s)	401, 407
BtsCI	GGATG	2 cut(s)	1110, 1300
BtsIMutI	CAGTG	3 cut(s)	887, 1335, 1591
BtuMI	TCGCGA	1 cut(s)	363
Cac8I	GCNNGC	8 cut(s)	302, 365, 369, 492, 593, 650, 1062, 1110
CciI	TCATGA	1 cut(s)	1702
CfoI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
Cfr10I	RCCGGY	3 cut(s)	367, 490, 648
Cfr13I	GGNCC	4 cut(s)	411, 533, 1205, 1556
Cfr42I	CCGCGG	1 cut(s)	404
CseI	GACGC	4 cut(s)	220, 343, 688, 729
Csp6I	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
CviAII	CATG	3 cut(s)	1061, 1109, 1703
CviQI	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
DdeI	CTNAG	3 cut(s)	94, 1137, 1548
DinI	GGCGCC	1 cut(s)	495
DpnI	GATC	6 cut(s)	110, 140, 812, 932, 1416, 1701
DpnII	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
DrdI	GACNNNNNNGTC	1 cut(s)	257
DseDI	GACNNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	1 cut(s)	404
EagI	CGGCCG	1 cut(s)	404
Eam1104I	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
EarI	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
EciI	GGCGGA	1 cut(s)	123
EclXI	CGGCCG	1 cut(s)	404
Eco130I	CCWWGG	3 cut(s)	438, 1041, 1659
Eco32I	GATATC	1 cut(s)	1335
Eco47I	GGWCC	2 cut(s)	411, 1205
Eco52I	CGGCCG	1 cut(s)	404
Eco57I	CTGAAG	2 cut(s)	966, 990
EcoRI	GAATTC	1 cut(s)	1445
EcoRII	CCWGG	1 cut(s)	933
EcoRV	GATATC	1 cut(s)	1335
EcoT14I	CCWWGG	3 cut(s)	438, 1041, 1659
EcoT22I	ATGCAT	1 cut(s)	1110
EgeI	GGCGCC	1 cut(s)	495
EheI	GGCGCC	1 cut(s)	495
ErhI	CCWWGG	3 cut(s)	438, 1041, 1659
Esp3I	CGTCTC	2 cut(s)	326, 712
FaeI	CATG	3 cut(s)	1064, 1112, 1706
FaqI	GGGAC	3 cut(s)	449, 1210, 1218
FatI	CATG	3 cut(s)	1060, 1108, 1702
FauI	CCCGC	6 cut(s)	135, 184, 474, 495, 510, 567
FblI	GTMKAC	2 cut(s)	1032, 1608
Fnu4HI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
FokI	GGATG	2 cut(s)	1117, 1307
Fsp4HI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
FspBI	CTAG	2 cut(s)	1308, 1397
GlaI	GCGC	8 cut(s)	256, 301, 303, 387, 423, 436, 495, 554
GluI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
HaeII	RGCGCY	4 cut(s)	425, 438, 497, 556
HaeIII	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
HapII	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
HgaI	GACGC	4 cut(s)	220, 343, 688, 729
HhaI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
Hin1I	GRCGYC	3 cut(s)	231, 335, 494
Hin1II	CATG	3 cut(s)	1064, 1112, 1706
Hin6I	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
HinP1I	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	7 cut(s)	358, 476, 583, 996, 1304, 1577, 1649
HpaII	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
HphI	GGTGA	4 cut(s)	229, 625, 1607, 1644
Hpy166II	GTNNAC	5 cut(s)	411, 1033, 1093, 1163, 1609
Hpy188I	TCNGA	7 cut(s)	120, 331, 643, 665, 1249, 1258, 1551
Hpy188III	TCNNGA	6 cut(s)	362, 944, 1360, 1418, 1429, 1703
Hpy8I	GTNNAC	5 cut(s)	411, 1033, 1093, 1163, 1609
Hpy99I	CGWCG	3 cut(s)	230, 248, 263
HpyAV	CCTTC	4 cut(s)	941, 1064, 1429, 1445
HpyCH4III	ACNGT	4 cut(s)	760, 1330, 1586, 1595
HpyCH4V	TGCA	3 cut(s)	1098, 1108, 1112
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
HpyF3I	CTNAG	3 cut(s)	94, 1137, 1548
Hsp92I	GRCGYC	3 cut(s)	231, 335, 494
Hsp92II	CATG	3 cut(s)	1064, 1112, 1706
HspAI	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
KasI	GGCGCC	1 cut(s)	493
KroI	GCCGGC	3 cut(s)	367, 490, 648
KroNI	GCCGGC	3 cut(s)	369, 492, 650
KspI	CCGCGG	1 cut(s)	404
Kzo9I	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
LguI	GCTCTTC	1 cut(s)	425
LmnI	GCTCC	5 cut(s)	169, 297, 631, 916, 946
Lsp1109I	GCAGC	3 cut(s)	148, 895, 1530
LweI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
MaeI	CTAG	2 cut(s)	1308, 1397
MaeIII	GTNAC	1 cut(s)	1595
MalI	GATC	6 cut(s)	110, 140, 812, 932, 1416, 1701
MbiI	CCGCTC	1 cut(s)	469
MboI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
MfeI	CAATTG	1 cut(s)	1371
MhlI	GDGCHC	1 cut(s)	1476
MluCI	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
Mly113I	GGCGCC	1 cut(s)	494
MlyI	GAGTC	3 cut(s)	470, 990, 1571
MmeI	TCCRAC	2 cut(s)	672, 779
Mph1103I	ATGCAT	1 cut(s)	1110
MreI	CGCCGGCG	1 cut(s)	490
MroNI	GCCGGC	3 cut(s)	367, 490, 648
MroXI	GAANNNNTTC	2 cut(s)	1152, 1542
MseI	TTAA	4 cut(s)	483, 1143, 1290, 1490
MslI	CAYNNNNRTG	1 cut(s)	1113
MspA1I	CMGCKG	2 cut(s)	403, 908
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
MspR9I	CCNGG	5 cut(s)	297, 498, 531, 564, 935
MunI	CAATTG	1 cut(s)	1371
MvaI	CCWGG	1 cut(s)	935
MvnI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
MwoI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
NaeI	GCCGGC	3 cut(s)	369, 492, 650
NarI	GGCGCC	1 cut(s)	494
NciI	CCSGG	4 cut(s)	297, 498, 531, 564
NdeII	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
NgoMIV	GCCGGC	3 cut(s)	367, 490, 648
NlaIII	CATG	3 cut(s)	1064, 1112, 1706
NlaIV	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
NmeAIII	GCCGAG	1 cut(s)	567
NmuCI	GTSAC	1 cut(s)	1595
NruI	TCGCGA	1 cut(s)	363
NsiI	ATGCAT	1 cut(s)	1110
NspI	RCATGY	2 cut(s)	1064, 1112
NspV	TTCGAA	1 cut(s)	1449
PaeI	GCATGC	2 cut(s)	1064, 1112
PagI	TCATGA	1 cut(s)	1702
PalAI	GGCGCGCC	1 cut(s)	300
PauI	GCGCGC	1 cut(s)	300
PciSI	GCTCTTC	1 cut(s)	425
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PdiI	GCCGGC	3 cut(s)	369, 492, 650
PdmI	GAANNNNTTC	2 cut(s)	1152, 1542
PfeI	GAWTC	4 cut(s)	358, 583, 1304, 1649
PflFI	GACNNNGTC	1 cut(s)	230
PfoI	TCCNGGA	1 cut(s)	933
PkrI	GCNGC	9 cut(s)	105, 163, 200, 390, 402, 405, 782, 910, 1520
PleI	GAGTC	3 cut(s)	470, 990, 1571
PluTI	GGCGCC	1 cut(s)	497
PpsI	GAGTC	3 cut(s)	470, 990, 1571
PshBI	ATTAAT	1 cut(s)	1490
Psp6I	CCWGG	1 cut(s)	933
PspGI	CCWGG	1 cut(s)	933
PspN4I	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
PspPI	GGNCC	4 cut(s)	411, 533, 1205, 1556
PsyI	GACNNNGTC	1 cut(s)	230
PteI	GCGCGC	1 cut(s)	300
PvuII	CAGCTG	1 cut(s)	908
RruI	TCGCGA	1 cut(s)	363
RsaI	GTAC	6 cut(s)	125, 287, 320, 1012, 1164, 1583
RsaNI	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
RseI	CAYNNNNRTG	1 cut(s)	1113
SacII	CCGCGG	1 cut(s)	404
SapI	GCTCTTC	1 cut(s)	425
SaqAI	TTAA	4 cut(s)	483, 1143, 1290, 1490
SatI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
Sau3AI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
Sau96I	GGNCC	4 cut(s)	411, 533, 1205, 1556
SchI	GAGTC	3 cut(s)	470, 990, 1571
ScrFI	CCNGG	5 cut(s)	297, 498, 531, 564, 935
SduI	GDGCHC	1 cut(s)	1476
SfaNI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
SfoI	GGCGCC	1 cut(s)	495
Sfr303I	CCGCGG	1 cut(s)	404
SfuI	TTCGAA	1 cut(s)	1449
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	404
SgsI	GGCGCGCC	1 cut(s)	300
SinI	GGWCC	2 cut(s)	411, 1205
SmiMI	CAYNNNNRTG	1 cut(s)	1113
SmlI	CTYRAG	2 cut(s)	1142, 1498
SmoI	CTYRAG	2 cut(s)	1142, 1498
SphI	GCATGC	2 cut(s)	1064, 1112
Sse9I	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
SspDI	GGCGCC	1 cut(s)	493
SspMI	CTAG	2 cut(s)	1308, 1397
StyD4I	CCNGG	5 cut(s)	295, 496, 529, 562, 933
StyI	CCWWGG	3 cut(s)	438, 1041, 1659
TaaI	ACNGT	4 cut(s)	760, 1330, 1586, 1595
TaqI	TCGA	5 cut(s)	309, 522, 820, 1449, 1698
TasI	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
TatI	WGTACW	3 cut(s)	318, 1010, 1162
TauI	GCSGC	6 cut(s)	106, 201, 391, 403, 406, 783
TfiI	GAWTC	4 cut(s)	358, 583, 1304, 1649
Tru1I	TTAA	4 cut(s)	483, 1143, 1290, 1490
Tru9I	TTAA	4 cut(s)	483, 1143, 1290, 1490
TscAI	CASTG	3 cut(s)	894, 1335, 1591
TseFI	GTSAC	1 cut(s)	1595
TseI	GCWGC	3 cut(s)	161, 908, 1518
Tsp45I	GTSAC	1 cut(s)	1595
TspDTI	ATGAA	6 cut(s)	467, 806, 978, 1197, 1416, 1551
TspRI	CASTG	3 cut(s)	894, 1335, 1591
Tth111I	GACNNNGTC	1 cut(s)	230
Vha464I	CTTAAG	1 cut(s)	1142
VpaK11BI	GGWCC	2 cut(s)	411, 1205
VspI	ATTAAT	1 cut(s)	1490
XapI	RAATTY	2 cut(s)	52, 1445
XceI	RCATGY	2 cut(s)	1064, 1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	894
XmiI	GTMKAC	2 cut(s)	1032, 1608
XmnI	GAANNNNTTC	2 cut(s)	1152, 1542
XspI	CTAG	2 cut(s)	1308, 1397
Zsp2I	ATGCAT	1 cut(s)	1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.