Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0015883

Physical Location & Seq

Genomic Coordinates Reverse (-)

66219698 .. 66222817

Gene Structure 3120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG417400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGCGGTAATAGCATCATTAGGCTTCAACCTCTTCTCCTCTCTCCCTCCAAATTCTCAACCAAGCGACCCAAATCCCAACGCAACCTCCACCTCAGCTTCGCCGCCGATCCCAATTCCGAAGTACCCGCCTCCGCCGATCAAAAAGCCCCGAAATAATGCTGCTCCTCCCAACCCCGCCCTCAAAAACTTCCACCGCCGCACCAAATACTACAAGCCCGTCCGCGACGGCGTCATCACCACCGACGGCGACCGCGCCGTCGTCATCGGCGAAAACGGCCTGTCGTACCAGCTCCCCGGCGCGCCGTTCGAGTTCCAGTACAGCTACTCGGAGACGCCAAAGGTCAAGCCTTTGGCGATTCGCGAGCCGGCGTTCCTGCCGTTCGCGCCGCCGACAATGCCGCGGCCGTGGACCGGAAAAGCGCCGTTGAAGAGCGCCAAGGAGAAGAAGATGAAGCGGAAAGTCCCGCTCTTTGACTCGTTTAACCCGCCGGCGCCGGGAACCAAAGGAGTGAAGCGGGTCGAAATGCCCGGCCCGTTTGATTTGGGGAAGCGCCCGAAACCCGGTAAAACGCGGGAGGAGATTCTCGGCGAGCCGTTGAAGCGGTGGGAGGTGAAAATGCTCGTCAAGGAGCAGTTGTCCGATAGCCGGCAAGTCAATCTCGGAAGAGATGGATTGACGCATAATATGTTGGATTTGATACATTCGCATTGGAAGAGACGCAGAGTTTGTAGAGTGAAATGTAAAGGTGTTCCAACTGTGGATATGGATAACATTTGCCGCCATATTGAGGAAAGAACTGGGGGGAAGATCATTCATCGAGTTGGTGGTGTAGTCTATCTTTTTCGGGGAAGAAACTATAACTATAATACCCGTCCGCAGTATCCACTGATGCTGTGGAAACCAGCTGCTCCGGTTTATCCCAAACTGATCCAGGAGGCTCCTGAAGGATTGACAAAAGATGAAGCTGAAGAGTTGAGAAAGAAAGGGAAAAGACTCTTGCCTATATGTACATTAGCCAAAAATGGAGTATACATCTCCTTGGTTAGAGATGTTAGGCATGCTTTTGAAGGAAGTTCTTTAGTAAAGGTTGACTGCAAAGGGATGCATGCAAGTGATTACAAAAAGTTGGGTGCTAAGCTTAAGGAATTGGTTCCTTGTGTACTGCTTTCTTTTGATGATGAACAGATATTGATGTGGAGGGGACCAGATTGGGTTTCAATGTCCCAAGAGGTGCCTCCACATTCAGAGTATTCTGATGTTGATATTACAACATCAAAAGCGAGAGTTAAGGATGACGATGATTCTAGTAAGCCAGACACGAAAACAGTGATATCAAGCCCTAAAATGATGTCGCTCTGGAAACACTCAATTGAAACAAACAAAGCATTGTTGCTAGATGAACTTGACCTTGATCCCGATGCTCTCTTGAAGAAGGTTGAGGAATTCGAAGGCATTTCACAGGCCACAGAGCACTCCTATCCAGCATTAATCCTCTCAAGCGAAGATGGCACCAGCAGCTCAATCCAAGTGTATGAAGATGTTCCTCAGAATGGCCCTTATAGCGAATACGAAGACTCGTACAGTGATAACGGTGACGATTATGTATACGATGATGATACCGATGACGATGCGTTATACGATAGTGATTCACCCCCCTTGGGGTCATTACCCGTTGATGTAATAGCAGAGAAACTCGATCATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

569

Amino Acids

63.77

Weight (kDa)

7.18

Isoelectric Point (pI)

52.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CRS1_YhbY	PF01985	201 - 283	3.3e-17	CRS1 / YhbY (CRM) domain
CRS1_YhbY	PF01985	318 - 401	1.7e-14	CRS1 / YhbY (CRM) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23400
fragaria_vesca	FvH4_4g32880
malus_domestica	MD13G1094700.v1.1
prunus_persica	Prupe.1G250700_v2.0.a1
pyrus_communis	pycom13g08250
rosa_chinensis	RchiOBHm_Chr4g0441911
rosa_laevigata	RLG00000006057
rosa_multiflora	Rmu_co8453927.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382720
rosa_rugosa	Rorug04G0336900
rosa_samantha	Rh4AG388600 Rh4BG402300 Rh4CG417400 Rh4DG395600
rosa_wichuraiana	Rw4G033560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	257
AccB1I	GGYRCC	3 cut(s)	493, 1234, 1511
AccBSI	CCGCTC	1 cut(s)	469
AccI	GTMKAC	2 cut(s)	1032, 1608
AccII	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
AclWI	GGATC	3 cut(s)	103, 925, 1409
AcoI	YGGCCR	1 cut(s)	404
AcsI	RAATTY	2 cut(s)	52, 1445
AcuI	CTGAAG	2 cut(s)	966, 990
AcyI	GRCGYC	3 cut(s)	231, 335, 494
AfaI	GTAC	6 cut(s)	125, 287, 320, 1012, 1164, 1583
AfiI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
AflII	CTTAAG	1 cut(s)	1142
AgsI	TTSAA	7 cut(s)	28, 430, 601, 1070, 1221, 1376, 1432
AjnI	CCWGG	1 cut(s)	933
AluBI	AGCT	7 cut(s)	98, 292, 324, 908, 968, 1141, 1521
AluI	AGCT	7 cut(s)	98, 292, 324, 908, 968, 1141, 1521
Alw21I	GWGCWC	1 cut(s)	1476
Alw26I	GTCTC	2 cut(s)	326, 712
AlwI	GGATC	3 cut(s)	103, 925, 1409
AoxI	GGCC	5 cut(s)	277, 404, 532, 1464, 1555
ApeKI	GCWGC	3 cut(s)	161, 908, 1518
ApoI	RAATTY	2 cut(s)	52, 1445
ArsI	GACNNNNNNTTYG	2 cut(s)	711, 743
AscI	GGCGCGCC	1 cut(s)	300
AseI	ATTAAT	1 cut(s)	1490
Asp700I	GAANNNNTTC	2 cut(s)	1152, 1542
AspLEI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
AspS9I	GGNCC	4 cut(s)	411, 533, 1205, 1556
AsuC2I	CCSGG	4 cut(s)	297, 498, 531, 564
AsuHPI	GGTGA	4 cut(s)	229, 625, 1607, 1644
AsuII	TTCGAA	1 cut(s)	1449
AvaII	GGWCC	2 cut(s)	411, 1205
BanI	GGYRCC	3 cut(s)	493, 1234, 1511
BbsI	GAAGAC	1 cut(s)	1581
Bbv12I	GWGCWC	1 cut(s)	1476
BbvCI	CCTCAGC	1 cut(s)	94
BbvI	GCAGC	3 cut(s)	148, 895, 1530
BccI	CCATC	2 cut(s)	665, 1502
BceAI	ACGGC	9 cut(s)	242, 244, 262, 289, 292, 364, 391, 409, 580
BcgI	CGANNNNNNTGC	2 cut(s)	1613, 1647
BciT130I	CCWGG	1 cut(s)	935
BciVI	GTATCC	1 cut(s)	894
BcnI	CCSGG	4 cut(s)	297, 498, 531, 564
BcoDI	GTCTC	2 cut(s)	326, 712
BfaI	CTAG	2 cut(s)	1308, 1397
BfoI	RGCGCY	4 cut(s)	425, 438, 497, 556
BfrI	CTTAAG	1 cut(s)	1142
BfuI	GTATCC	1 cut(s)	894
BisI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
BlpI	GCTNAGC	1 cut(s)	1137
BlsI	GCNGC	9 cut(s)	105, 163, 200, 390, 402, 405, 782, 910, 1520
Bme1390I	CCNGG	5 cut(s)	297, 498, 531, 564, 935
Bme18I	GGWCC	2 cut(s)	411, 1205
BmgT120I	GGNCC	4 cut(s)	411, 533, 1205, 1556
BmiI	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
BmrFI	CCNGG	5 cut(s)	297, 498, 531, 564, 935
BmrI	ACTGGG	1 cut(s)	810
BmsI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
BmuI	ACTGGG	1 cut(s)	810
BpiI	GAAGAC	1 cut(s)	1581
Bpu10I	CCTNAGC	1 cut(s)	94
Bpu1102I	GCTNAGC	1 cut(s)	1137
Bpu14I	TTCGAA	1 cut(s)	1449
BpuEI	CTTGAG	1 cut(s)	1483
BpuMI	CCSGG	4 cut(s)	297, 498, 531, 564
BsaHI	GRCGYC	3 cut(s)	231, 335, 494
BsaJI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BsaWI	WCCGGW	2 cut(s)	413, 913
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 71, 101, 623, 653
Bsc4I	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
Bse118I	RCCGGY	3 cut(s)	367, 490, 648
Bse1I	ACTGG	2 cut(s)	316, 805
BseBI	CCWGG	1 cut(s)	935
BseDI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BseGI	GGATG	2 cut(s)	1110, 1300
BseLI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
BseMII	CTCAG	2 cut(s)	108, 1562
BseNI	ACTGG	2 cut(s)	316, 805
BsePI	GCGCGC	1 cut(s)	300
BseRI	GAGGAG	3 cut(s)	28, 156, 593
BseX3I	CGGCCG	1 cut(s)	404
BseXI	GCAGC	3 cut(s)	148, 895, 1530
Bsh1236I	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
Bsh1285I	CGRYCG	2 cut(s)	253, 407
BshFI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BshNI	GGYRCC	3 cut(s)	493, 1234, 1511
BsiEI	CGRYCG	2 cut(s)	253, 407
BsiHKAI	GWGCWC	1 cut(s)	1476
BsiSI	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
BslFI	GGGAC	3 cut(s)	449, 1210, 1218
BslI	CCNNNNNNNGG	8 cut(s)	413, 497, 563, 648, 790, 1553, 1661, 1662
BsmAI	GTCTC	2 cut(s)	326, 712
BsmBI	CGTCTC	2 cut(s)	326, 712
BsmFI	GGGAC	3 cut(s)	449, 1210, 1218
BsnI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
Bsp119I	TTCGAA	1 cut(s)	1449
Bsp1286I	GDGCHC	1 cut(s)	1476
Bsp1407I	TGTACA	1 cut(s)	1010
Bsp143I	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
Bsp1720I	GCTNAGC	1 cut(s)	1137
Bsp68I	TCGCGA	1 cut(s)	363
BspANI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BspCNI	CTCAG	2 cut(s)	107, 1561
BspFNI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BspHI	TCATGA	1 cut(s)	1702
BspLI	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
BspPI	GGATC	3 cut(s)	103, 925, 1409
BspQI	GCTCTTC	1 cut(s)	425
BspT104I	TTCGAA	1 cut(s)	1449
BspT107I	GGYRCC	3 cut(s)	493, 1234, 1511
BspTI	CTTAAG	1 cut(s)	1142
BsrBI	CCGCTC	1 cut(s)	469
BsrFI	RCCGGY	3 cut(s)	367, 490, 648
BsrGI	TGTACA	1 cut(s)	1010
BsrI	ACTGG	2 cut(s)	316, 805
BssAI	RCCGGY	3 cut(s)	367, 490, 648
BssECI	CCNNGG	6 cut(s)	295, 401, 407, 438, 1041, 1659
BssHII	GCGCGC	1 cut(s)	300
BssMI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
BssNAI	GTATAC	2 cut(s)	1033, 1609
BssNI	GRCGYC	3 cut(s)	231, 335, 494
BssT1I	CCWWGG	3 cut(s)	438, 1041, 1659
Bst1107I	GTATAC	2 cut(s)	1033, 1609
Bst2UI	CCWGG	1 cut(s)	935
Bst4CI	ACNGT	4 cut(s)	760, 1330, 1586, 1595
Bst6I	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
BstACI	GRCGYC	3 cut(s)	231, 335, 494
BstAFI	CTTAAG	1 cut(s)	1142
BstAUI	TGTACA	1 cut(s)	1010
BstBI	TTCGAA	1 cut(s)	1449
BstC8I	GCNNGC	8 cut(s)	302, 365, 369, 492, 593, 650, 1062, 1110
BstDEI	CTNAG	3 cut(s)	94, 1137, 1548
BstDSI	CCRYGG	2 cut(s)	401, 407
BstF5I	GGATG	2 cut(s)	1110, 1300
BstFNI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BstH2I	RGCGCY	4 cut(s)	425, 438, 497, 556
BstHHI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
BstKTI	GATC	6 cut(s)	111, 141, 813, 933, 1417, 1702
BstMAI	GTCTC	2 cut(s)	326, 712
BstMBI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
BstMCI	CGRYCG	2 cut(s)	253, 407
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
BstNI	CCWGG	1 cut(s)	935
BstNSI	RCATGY	2 cut(s)	1064, 1112
BstSCI	CCNGG	5 cut(s)	295, 496, 529, 562, 933
BstUI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
BstV1I	GCAGC	3 cut(s)	148, 895, 1530
BstV2I	GAAGAC	1 cut(s)	1581
BstZ17I	GTATAC	2 cut(s)	1033, 1609
BstZI	CGGCCG	1 cut(s)	404
BsuI	GTATCC	1 cut(s)	894
BsuRI	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
BtgI	CCRYGG	2 cut(s)	401, 407
BtsCI	GGATG	2 cut(s)	1110, 1300
BtsIMutI	CAGTG	3 cut(s)	887, 1335, 1591
BtuMI	TCGCGA	1 cut(s)	363
Cac8I	GCNNGC	8 cut(s)	302, 365, 369, 492, 593, 650, 1062, 1110
CciI	TCATGA	1 cut(s)	1702
CfoI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
Cfr10I	RCCGGY	3 cut(s)	367, 490, 648
Cfr13I	GGNCC	4 cut(s)	411, 533, 1205, 1556
Cfr42I	CCGCGG	1 cut(s)	404
CseI	GACGC	4 cut(s)	220, 343, 688, 729
Csp6I	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
CviAII	CATG	3 cut(s)	1061, 1109, 1703
CviQI	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
DdeI	CTNAG	3 cut(s)	94, 1137, 1548
DinI	GGCGCC	1 cut(s)	495
DpnI	GATC	6 cut(s)	110, 140, 812, 932, 1416, 1701
DpnII	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
DrdI	GACNNNNNNGTC	1 cut(s)	257
DseDI	GACNNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	1 cut(s)	404
EagI	CGGCCG	1 cut(s)	404
Eam1104I	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
EarI	CTCTTC	5 cut(s)	38, 425, 661, 710, 966
EciI	GGCGGA	1 cut(s)	123
EclXI	CGGCCG	1 cut(s)	404
Eco130I	CCWWGG	3 cut(s)	438, 1041, 1659
Eco32I	GATATC	1 cut(s)	1335
Eco47I	GGWCC	2 cut(s)	411, 1205
Eco52I	CGGCCG	1 cut(s)	404
Eco57I	CTGAAG	2 cut(s)	966, 990
EcoRI	GAATTC	1 cut(s)	1445
EcoRII	CCWGG	1 cut(s)	933
EcoRV	GATATC	1 cut(s)	1335
EcoT14I	CCWWGG	3 cut(s)	438, 1041, 1659
EcoT22I	ATGCAT	1 cut(s)	1110
EgeI	GGCGCC	1 cut(s)	495
EheI	GGCGCC	1 cut(s)	495
ErhI	CCWWGG	3 cut(s)	438, 1041, 1659
Esp3I	CGTCTC	2 cut(s)	326, 712
FaeI	CATG	3 cut(s)	1064, 1112, 1706
FaqI	GGGAC	3 cut(s)	449, 1210, 1218
FatI	CATG	3 cut(s)	1060, 1108, 1702
FauI	CCCGC	6 cut(s)	135, 184, 474, 495, 510, 567
FblI	GTMKAC	2 cut(s)	1032, 1608
Fnu4HI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
FokI	GGATG	2 cut(s)	1117, 1307
Fsp4HI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
FspBI	CTAG	2 cut(s)	1308, 1397
GlaI	GCGC	8 cut(s)	256, 301, 303, 387, 423, 436, 495, 554
GluI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
HaeII	RGCGCY	4 cut(s)	425, 438, 497, 556
HaeIII	GGCC	5 cut(s)	279, 406, 534, 1466, 1557
HapII	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
HgaI	GACGC	4 cut(s)	220, 343, 688, 729
HhaI	GCGC	8 cut(s)	257, 302, 304, 388, 424, 437, 496, 555
Hin1I	GRCGYC	3 cut(s)	231, 335, 494
Hin1II	CATG	3 cut(s)	1064, 1112, 1706
Hin6I	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
HinP1I	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
HincII	GTYRAC	1 cut(s)	1093
HindII	GTYRAC	1 cut(s)	1093
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	7 cut(s)	358, 476, 583, 996, 1304, 1577, 1649
HpaII	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
HphI	GGTGA	4 cut(s)	229, 625, 1607, 1644
Hpy166II	GTNNAC	5 cut(s)	411, 1033, 1093, 1163, 1609
Hpy188I	TCNGA	7 cut(s)	120, 331, 643, 665, 1249, 1258, 1551
Hpy188III	TCNNGA	6 cut(s)	362, 944, 1360, 1418, 1429, 1703
Hpy8I	GTNNAC	5 cut(s)	411, 1033, 1093, 1163, 1609
Hpy99I	CGWCG	3 cut(s)	230, 248, 263
HpyAV	CCTTC	4 cut(s)	941, 1064, 1429, 1445
HpyCH4III	ACNGT	4 cut(s)	760, 1330, 1586, 1595
HpyCH4V	TGCA	3 cut(s)	1098, 1108, 1112
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
HpyF3I	CTNAG	3 cut(s)	94, 1137, 1548
Hsp92I	GRCGYC	3 cut(s)	231, 335, 494
Hsp92II	CATG	3 cut(s)	1064, 1112, 1706
HspAI	GCGC	8 cut(s)	255, 300, 302, 386, 422, 435, 494, 553
KasI	GGCGCC	1 cut(s)	493
KroI	GCCGGC	3 cut(s)	367, 490, 648
KroNI	GCCGGC	3 cut(s)	369, 492, 650
KspI	CCGCGG	1 cut(s)	404
Kzo9I	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
LguI	GCTCTTC	1 cut(s)	425
LmnI	GCTCC	5 cut(s)	169, 297, 631, 916, 946
Lsp1109I	GCAGC	3 cut(s)	148, 895, 1530
LweI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
MaeI	CTAG	2 cut(s)	1308, 1397
MaeIII	GTNAC	1 cut(s)	1595
MalI	GATC	6 cut(s)	110, 140, 812, 932, 1416, 1701
MbiI	CCGCTC	1 cut(s)	469
MboI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
MfeI	CAATTG	1 cut(s)	1371
MhlI	GDGCHC	1 cut(s)	1476
MluCI	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
Mly113I	GGCGCC	1 cut(s)	494
MlyI	GAGTC	3 cut(s)	470, 990, 1571
MmeI	TCCRAC	2 cut(s)	672, 779
Mph1103I	ATGCAT	1 cut(s)	1110
MreI	CGCCGGCG	1 cut(s)	490
MroNI	GCCGGC	3 cut(s)	367, 490, 648
MroXI	GAANNNNTTC	2 cut(s)	1152, 1542
MseI	TTAA	4 cut(s)	483, 1143, 1290, 1490
MslI	CAYNNNNRTG	1 cut(s)	1113
MspA1I	CMGCKG	2 cut(s)	403, 908
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	9 cut(s)	297, 368, 414, 491, 497, 531, 564, 649, 914
MspR9I	CCNGG	5 cut(s)	297, 498, 531, 564, 935
MunI	CAATTG	1 cut(s)	1371
MvaI	CCWGG	1 cut(s)	935
MvnI	CGCG	7 cut(s)	225, 255, 302, 363, 386, 403, 574
MwoI	GCNNNNNNNGC	8 cut(s)	11, 276, 385, 397, 601, 1509, 1518, 1563
NaeI	GCCGGC	3 cut(s)	369, 492, 650
NarI	GGCGCC	1 cut(s)	494
NciI	CCSGG	4 cut(s)	297, 498, 531, 564
NdeII	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
NgoMIV	GCCGGC	3 cut(s)	367, 490, 648
NlaIII	CATG	3 cut(s)	1064, 1112, 1706
NlaIV	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
NmeAIII	GCCGAG	1 cut(s)	567
NmuCI	GTSAC	1 cut(s)	1595
NruI	TCGCGA	1 cut(s)	363
NsiI	ATGCAT	1 cut(s)	1110
NspI	RCATGY	2 cut(s)	1064, 1112
NspV	TTCGAA	1 cut(s)	1449
PaeI	GCATGC	2 cut(s)	1064, 1112
PagI	TCATGA	1 cut(s)	1702
PalAI	GGCGCGCC	1 cut(s)	300
PauI	GCGCGC	1 cut(s)	300
PciSI	GCTCTTC	1 cut(s)	425
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PdiI	GCCGGC	3 cut(s)	369, 492, 650
PdmI	GAANNNNTTC	2 cut(s)	1152, 1542
PfeI	GAWTC	4 cut(s)	358, 583, 1304, 1649
PflFI	GACNNNGTC	1 cut(s)	230
PfoI	TCCNGGA	1 cut(s)	933
PkrI	GCNGC	9 cut(s)	105, 163, 200, 390, 402, 405, 782, 910, 1520
PleI	GAGTC	3 cut(s)	470, 990, 1571
PluTI	GGCGCC	1 cut(s)	497
PpsI	GAGTC	3 cut(s)	470, 990, 1571
PshBI	ATTAAT	1 cut(s)	1490
Psp6I	CCWGG	1 cut(s)	933
PspGI	CCWGG	1 cut(s)	933
PspN4I	GGNNCC	7 cut(s)	495, 502, 942, 1155, 1206, 1236, 1513
PspPI	GGNCC	4 cut(s)	411, 533, 1205, 1556
PsyI	GACNNNGTC	1 cut(s)	230
PteI	GCGCGC	1 cut(s)	300
PvuII	CAGCTG	1 cut(s)	908
RruI	TCGCGA	1 cut(s)	363
RsaI	GTAC	6 cut(s)	125, 287, 320, 1012, 1164, 1583
RsaNI	GTAC	6 cut(s)	124, 286, 319, 1011, 1163, 1582
RseI	CAYNNNNRTG	1 cut(s)	1113
SacII	CCGCGG	1 cut(s)	404
SapI	GCTCTTC	1 cut(s)	425
SaqAI	TTAA	4 cut(s)	483, 1143, 1290, 1490
SatI	GCNGC	9 cut(s)	104, 162, 199, 389, 401, 404, 781, 909, 1519
Sau3AI	GATC	6 cut(s)	108, 138, 810, 930, 1414, 1699
Sau96I	GGNCC	4 cut(s)	411, 533, 1205, 1556
SchI	GAGTC	3 cut(s)	470, 990, 1571
ScrFI	CCNGG	5 cut(s)	297, 498, 531, 564, 935
SduI	GDGCHC	1 cut(s)	1476
SfaNI	GCATC	5 cut(s)	23, 882, 1095, 1411, 1621
SfoI	GGCGCC	1 cut(s)	495
Sfr303I	CCGCGG	1 cut(s)	404
SfuI	TTCGAA	1 cut(s)	1449
SgrAI	CRCCGGYG	1 cut(s)	490
SgrBI	CCGCGG	1 cut(s)	404
SgsI	GGCGCGCC	1 cut(s)	300
SinI	GGWCC	2 cut(s)	411, 1205
SmiMI	CAYNNNNRTG	1 cut(s)	1113
SmlI	CTYRAG	2 cut(s)	1142, 1498
SmoI	CTYRAG	2 cut(s)	1142, 1498
SphI	GCATGC	2 cut(s)	1064, 1112
Sse9I	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
SspDI	GGCGCC	1 cut(s)	493
SspMI	CTAG	2 cut(s)	1308, 1397
StyD4I	CCNGG	5 cut(s)	295, 496, 529, 562, 933
StyI	CCWWGG	3 cut(s)	438, 1041, 1659
TaaI	ACNGT	4 cut(s)	760, 1330, 1586, 1595
TaqI	TCGA	5 cut(s)	309, 522, 820, 1449, 1698
TasI	AATT	5 cut(s)	52, 114, 1148, 1371, 1445
TatI	WGTACW	3 cut(s)	318, 1010, 1162
TauI	GCSGC	6 cut(s)	106, 201, 391, 403, 406, 783
TfiI	GAWTC	4 cut(s)	358, 583, 1304, 1649
Tru1I	TTAA	4 cut(s)	483, 1143, 1290, 1490
Tru9I	TTAA	4 cut(s)	483, 1143, 1290, 1490
TscAI	CASTG	3 cut(s)	894, 1335, 1591
TseFI	GTSAC	1 cut(s)	1595
TseI	GCWGC	3 cut(s)	161, 908, 1518
Tsp45I	GTSAC	1 cut(s)	1595
TspDTI	ATGAA	6 cut(s)	467, 806, 978, 1197, 1416, 1551
TspRI	CASTG	3 cut(s)	894, 1335, 1591
Tth111I	GACNNNGTC	1 cut(s)	230
Vha464I	CTTAAG	1 cut(s)	1142
VpaK11BI	GGWCC	2 cut(s)	411, 1205
VspI	ATTAAT	1 cut(s)	1490
XapI	RAATTY	2 cut(s)	52, 1445
XceI	RCATGY	2 cut(s)	1064, 1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	894
XmiI	GTMKAC	2 cut(s)	1032, 1608
XmnI	GAANNNNTTC	2 cut(s)	1152, 1542
XspI	CTAG	2 cut(s)	1308, 1397
Zsp2I	ATGCAT	1 cut(s)	1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.