Pyruvate kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0353501 |
| rosa_laevigata | RLG00000012063 |
| rosa_roxburghii | Rroxscaffold_4G00325960 Rroxscaffold_5G00378580 Rroxscaffold_6G00410900 |
| rosa_rugosa | Rorug06G0205700 |
| rosa_samantha | Rh4CG126400 Rh5DG131500 Rh6CG219400 Rh6DG315700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 3 cut(s) | 256, 321, 356 |
| AccIII | TCCGGA | 1 cut(s) | 298 |
| AciI | CCGC | 4 cut(s) | 256, 319, 337, 354 |
| AclWI | GGATC | 1 cut(s) | 309 |
| AcoI | YGGCCR | 1 cut(s) | 280 |
| AcsI | RAATTY | 3 cut(s) | 60, 104, 111 |
| AdeI | CACNNNGTG | 1 cut(s) | 88 |
| AfaI | GTAC | 2 cut(s) | 9, 233 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AgsI | TTSAA | 3 cut(s) | 98, 215, 251 |
| AluBI | AGCT | 3 cut(s) | 270, 348, 362 |
| AluI | AGCT | 3 cut(s) | 270, 348, 362 |
| AlwI | GGATC | 1 cut(s) | 309 |
| Aor13HI | TCCGGA | 1 cut(s) | 298 |
| AoxI | GGCC | 1 cut(s) | 280 |
| ApeKI | GCWGC | 1 cut(s) | 339 |
| ApoI | RAATTY | 3 cut(s) | 60, 104, 111 |
| AspS9I | GGNCC | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 3 cut(s) | 100, 298, 366 |
| AvaII | GGWCC | 1 cut(s) | 296 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 32 |
| BauI | CACGAG | 2 cut(s) | 83, 343 |
| BbvI | GCAGC | 1 cut(s) | 326 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BglII | AGATCT | 1 cut(s) | 126 |
| BisI | GCNGC | 1 cut(s) | 340 |
| BlsI | GCNGC | 1 cut(s) | 341 |
| Bme18I | GGWCC | 1 cut(s) | 296 |
| BmgT120I | GGNCC | 1 cut(s) | 296 |
| BpmI | CTGGAG | 1 cut(s) | 342 |
| BsaJI | CCNNGG | 1 cut(s) | 163 |
| BsaWI | WCCGGW | 1 cut(s) | 298 |
| Bse118I | RCCGGY | 1 cut(s) | 278 |
| BseAI | TCCGGA | 1 cut(s) | 298 |
| BseDI | CCNNGG | 1 cut(s) | 163 |
| BseGI | GGATG | 2 cut(s) | 159, 333 |
| BseMII | CTCAG | 1 cut(s) | 152 |
| BseXI | GCAGC | 1 cut(s) | 326 |
| BsgI | GTGCAG | 2 cut(s) | 259, 325 |
| BshFI | GGCC | 1 cut(s) | 282 |
| BsiSI | CCGG | 2 cut(s) | 279, 299 |
| BsnI | GGCC | 1 cut(s) | 282 |
| Bsp13I | TCCGGA | 1 cut(s) | 298 |
| Bsp1407I | TGTACA | 1 cut(s) | 231 |
| Bsp143I | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| BspACI | CCGC | 4 cut(s) | 256, 319, 337, 354 |
| BspANI | GGCC | 1 cut(s) | 282 |
| BspCNI | CTCAG | 1 cut(s) | 151 |
| BspEI | TCCGGA | 1 cut(s) | 298 |
| BspPI | GGATC | 1 cut(s) | 309 |
| BspQI | GCTCTTC | 2 cut(s) | 246, 328 |
| BsrBI | CCGCTC | 3 cut(s) | 256, 321, 356 |
| BsrFI | RCCGGY | 1 cut(s) | 278 |
| BsrGI | TGTACA | 1 cut(s) | 231 |
| BssAI | RCCGGY | 1 cut(s) | 278 |
| BssECI | CCNNGG | 1 cut(s) | 163 |
| BssMI | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| BssSI | CACGAG | 2 cut(s) | 83, 343 |
| BssT1I | CCWWGG | 1 cut(s) | 163 |
| Bst2BI | CACGAG | 2 cut(s) | 83, 343 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 246, 328 |
| BstAUI | TGTACA | 1 cut(s) | 231 |
| BstDEI | CTNAG | 1 cut(s) | 138 |
| BstF5I | GGATG | 2 cut(s) | 159, 333 |
| BstKTI | GATC | 5 cut(s) | 93, 129, 266, 304, 393 |
| BstMBI | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 345 |
| BstNSI | RCATGY | 2 cut(s) | 16, 176 |
| BstV1I | GCAGC | 1 cut(s) | 326 |
| BstX2I | RGATCY | 2 cut(s) | 126, 301 |
| BstYI | RGATCY | 2 cut(s) | 126, 301 |
| BsuRI | GGCC | 1 cut(s) | 282 |
| BtsCI | GGATG | 2 cut(s) | 159, 333 |
| Cfr10I | RCCGGY | 1 cut(s) | 278 |
| Cfr13I | GGNCC | 1 cut(s) | 296 |
| CpoI | CGGWCCG | 1 cut(s) | 296 |
| Csp6I | GTAC | 2 cut(s) | 8, 232 |
| CspI | CGGWCCG | 1 cut(s) | 296 |
| CviAII | CATG | 3 cut(s) | 13, 75, 173 |
| CviJI | RGCY | 5 cut(s) | 137, 270, 282, 348, 362 |
| CviKI_1 | RGCY | 5 cut(s) | 137, 270, 282, 348, 362 |
| CviQI | GTAC | 2 cut(s) | 8, 232 |
| DdeI | CTNAG | 1 cut(s) | 138 |
| DpnI | GATC | 5 cut(s) | 92, 128, 265, 303, 392 |
| DpnII | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| DraIII | CACNNNGTG | 1 cut(s) | 88 |
| EaeI | YGGCCR | 1 cut(s) | 280 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 246, 328 |
| EarI | CTCTTC | 3 cut(s) | 117, 246, 328 |
| Eco130I | CCWWGG | 1 cut(s) | 163 |
| Eco32I | GATATC | 1 cut(s) | 51 |
| Eco47I | GGWCC | 1 cut(s) | 296 |
| EcoRV | GATATC | 1 cut(s) | 51 |
| EcoT14I | CCWWGG | 1 cut(s) | 163 |
| EcoT22I | ATGCAT | 1 cut(s) | 72 |
| ErhI | CCWWGG | 1 cut(s) | 163 |
| FaeI | CATG | 3 cut(s) | 16, 78, 176 |
| FaiI | YATR | 8 cut(s) | 14, 66, 68, 72, 76, 150, 174, 219 |
| FatI | CATG | 3 cut(s) | 12, 74, 172 |
| FauNDI | CATATG | 1 cut(s) | 66 |
| Fnu4HI | GCNGC | 1 cut(s) | 340 |
| FokI | GGATG | 2 cut(s) | 146, 320 |
| Fsp4HI | GCNGC | 1 cut(s) | 340 |
| FspBI | CTAG | 1 cut(s) | 203 |
| GluI | GCNGC | 1 cut(s) | 340 |
| GsuI | CTGGAG | 1 cut(s) | 342 |
| HaeIII | GGCC | 1 cut(s) | 282 |
| HapII | CCGG | 2 cut(s) | 279, 299 |
| Hin1II | CATG | 3 cut(s) | 16, 78, 176 |
| HinfI | GANTC | 2 cut(s) | 32, 386 |
| HpaII | CCGG | 2 cut(s) | 279, 299 |
| HphI | GGTGA | 3 cut(s) | 100, 298, 366 |
| Hpy188I | TCNGA | 2 cut(s) | 141, 395 |
| Hpy188III | TCNNGA | 3 cut(s) | 181, 261, 299 |
| HpyAV | CCTTC | 3 cut(s) | 22, 325, 387 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 58, 70, 156, 276, 342 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 345 |
| HpyF3I | CTNAG | 1 cut(s) | 138 |
| Hsp92II | CATG | 3 cut(s) | 16, 78, 176 |
| Kpn2I | TCCGGA | 1 cut(s) | 298 |
| Kzo9I | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| LguI | GCTCTTC | 2 cut(s) | 246, 328 |
| LmnI | GCTCC | 2 cut(s) | 361, 367 |
| LpnPI | CCDG | 3 cut(s) | 292, 312, 372 |
| Lsp1109I | GCAGC | 1 cut(s) | 326 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MaeIII | GTNAC | 2 cut(s) | 33, 178 |
| MalI | GATC | 5 cut(s) | 92, 128, 265, 303, 392 |
| MbiI | CCGCTC | 3 cut(s) | 256, 321, 356 |
| MboI | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| MboII | GAAGA | 3 cut(s) | 134, 263, 315 |
| MflI | RGATCY | 2 cut(s) | 126, 301 |
| MluCI | AATT | 7 cut(s) | 21, 60, 104, 111, 227, 284, 366 |
| MlyI | GAGTC | 2 cut(s) | 41, 395 |
| MmeI | TCCRAC | 2 cut(s) | 177, 351 |
| MnlI | CCTC | 1 cut(s) | 79 |
| Mph1103I | ATGCAT | 1 cut(s) | 72 |
| MroI | TCCGGA | 1 cut(s) | 298 |
| MspA1I | CMGCKG | 1 cut(s) | 339 |
| MspI | CCGG | 2 cut(s) | 279, 299 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 345 |
| NdeI | CATATG | 1 cut(s) | 66 |
| NdeII | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| NlaIII | CATG | 3 cut(s) | 16, 78, 176 |
| NmuCI | GTSAC | 2 cut(s) | 33, 178 |
| NsiI | ATGCAT | 1 cut(s) | 72 |
| NspI | RCATGY | 2 cut(s) | 16, 176 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PciSI | GCTCTTC | 2 cut(s) | 246, 328 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 386 |
| PkrI | GCNGC | 1 cut(s) | 341 |
| PleI | GAGTC | 2 cut(s) | 40, 394 |
| PpsI | GAGTC | 2 cut(s) | 40, 394 |
| PscI | ACATGT | 1 cut(s) | 172 |
| PspPI | GGNCC | 1 cut(s) | 296 |
| PsuI | RGATCY | 2 cut(s) | 126, 301 |
| RsaI | GTAC | 2 cut(s) | 9, 233 |
| RsaNI | GTAC | 2 cut(s) | 8, 232 |
| Rsr2I | CGGWCCG | 1 cut(s) | 296 |
| RsrII | CGGWCCG | 1 cut(s) | 296 |
| SapI | GCTCTTC | 2 cut(s) | 246, 328 |
| SatI | GCNGC | 1 cut(s) | 340 |
| Sau3AI | GATC | 5 cut(s) | 90, 126, 263, 301, 390 |
| Sau96I | GGNCC | 1 cut(s) | 296 |
| SchI | GAGTC | 2 cut(s) | 41, 395 |
| SetI | ASST | 7 cut(s) | 9, 90, 272, 311, 350, 364, 379 |
| SinI | GGWCC | 1 cut(s) | 296 |
| Sse9I | AATT | 7 cut(s) | 21, 60, 104, 111, 227, 284, 366 |
| SsiI | CCGC | 4 cut(s) | 256, 319, 337, 354 |
| SspMI | CTAG | 1 cut(s) | 203 |
| StyI | CCWWGG | 1 cut(s) | 163 |
| TaqI | TCGA | 2 cut(s) | 266, 389 |
| TaqII | GACCGA | 1 cut(s) | 284 |
| TasI | AATT | 7 cut(s) | 21, 60, 104, 111, 227, 284, 366 |
| TatI | WGTACW | 1 cut(s) | 231 |
| TseFI | GTSAC | 2 cut(s) | 33, 178 |
| TseI | GCWGC | 1 cut(s) | 339 |
| Tsp45I | GTSAC | 2 cut(s) | 33, 178 |
| TspDTI | ATGAA | 2 cut(s) | 53, 240 |
| VpaK11BI | GGWCC | 1 cut(s) | 296 |
| XapI | RAATTY | 3 cut(s) | 60, 104, 111 |
| XceI | RCATGY | 2 cut(s) | 16, 176 |
| XspI | CTAG | 1 cut(s) | 203 |
| Zsp2I | ATGCAT | 1 cut(s) | 72 |