Rh4DG073100

DOMON domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
10783443 .. 10785799
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG073100.1

Sequence Viewer

Length: 234 bp
ATGATGAGAGCTCGTTTGCTGTGGTTCGCTCTCGGCTTCTCCTCCACCGGAGTTGCAATTTCTCACCTGATTTGGAAAGATCTTATTGTCGACCGCACCGCTCTTTCCTCTGATGTGATGCGAAAGTTTGCTGCTCTTGAAAGCAGAATCGTGAACCTGGAGCATTCTTATCAGAATCCCAATCCGGCTTCTCAGGTATTATTTGGGTTTTCTTTCGTTTATTGGATTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.82

Weight (kDa)

9.52

Isoelectric Point (pI)

13.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015919)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 101
AccI GTMKAC 1 cut(s) 90
AciI CCGC 2 cut(s) 94, 99
AgsI TTSAA 1 cut(s) 140
AjnI CCWGG 1 cut(s) 156
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
Alw21I GWGCWC 1 cut(s) 13
ApeKI GCWGC 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 56
BanII GRGCYC 1 cut(s) 13
Bbv12I GWGCWC 1 cut(s) 13
BbvI GCAGC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 158
BglII AGATCT 1 cut(s) 79
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
Bme1390I CCNGG 1 cut(s) 158
BmrFI CCNGG 1 cut(s) 158
BmsI GCATC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 179
BsaWI WCCGGW 1 cut(s) 47
BseBI CCWGG 1 cut(s) 158
BseMII CTCAG 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 31
BseXI GCAGC 1 cut(s) 118
Bsh1285I CGRYCG 1 cut(s) 94
BsiEI CGRYCG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 13
BsiSI CCGG 2 cut(s) 48, 185
BsmI GAATGC 1 cut(s) 163
Bsp1286I GDGCHC 1 cut(s) 13
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 2 cut(s) 94, 99
BspCNI CTCAG 1 cut(s) 205
BsrBI CCGCTC 1 cut(s) 101
BssMI GATC 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 158
BstDEI CTNAG 1 cut(s) 192
BstKTI GATC 1 cut(s) 82
BstMBI GATC 1 cut(s) 79
BstMCI CGRYCG 1 cut(s) 94
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 156
BstV1I GCAGC 1 cut(s) 118
BstX2I RGATCY 1 cut(s) 79
BstYI RGATCY 1 cut(s) 79
CspCI CAANNNNNGTGG 2 cut(s) 34, 69
CviJI RGCY 3 cut(s) 11, 36, 188
CviKI_1 RGCY 3 cut(s) 11, 36, 188
DdeI CTNAG 1 cut(s) 192
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
Ecl136II GAGCTC 1 cut(s) 11
Eco24I GRGCYC 1 cut(s) 13
Eco53kI GAGCTC 1 cut(s) 11
EcoICRI GAGCTC 1 cut(s) 11
EcoRII CCWGG 1 cut(s) 156
EcoT38I GRGCYC 1 cut(s) 13
FaiI YATR 1 cut(s) 232
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 1 cut(s) 132
FriOI GRGCYC 1 cut(s) 13
Fsp4HI GCNGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 132
GsuI CTGGAG 1 cut(s) 179
HapII CCGG 2 cut(s) 48, 185
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HinfI GANTC 2 cut(s) 147, 175
HpaII CCGG 2 cut(s) 48, 185
HphI GGTGA 1 cut(s) 56
Hpy166II GTNNAC 2 cut(s) 91, 154
Hpy188I TCNGA 2 cut(s) 112, 174
Hpy188III TCNNGA 2 cut(s) 137, 151
Hpy8I GTNNAC 2 cut(s) 91, 154
HpyCH4V TGCA 1 cut(s) 56
HpyF3I CTNAG 1 cut(s) 192
Kzo9I GATC 1 cut(s) 79
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 6 cut(s) 61, 80, 143, 170, 179, 198
Lsp1109I GCAGC 1 cut(s) 118
LweI GCATC 1 cut(s) 108
MalI GATC 1 cut(s) 81
MbiI CCGCTC 1 cut(s) 101
MboI GATC 1 cut(s) 79
MflI RGATCY 1 cut(s) 79
MhlI GDGCHC 1 cut(s) 13
MluCI AATT 1 cut(s) 57
MnlI CCTC 2 cut(s) 52, 118
MspI CCGG 2 cut(s) 48, 185
MspR9I CCNGG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 163
MvaI CCWGG 1 cut(s) 158
NdeII GATC 1 cut(s) 79
NmeAIII GCCGAG 1 cut(s) 12
PctI GAATGC 1 cut(s) 163
PfeI GAWTC 2 cut(s) 147, 175
PkrI GCNGC 1 cut(s) 133
Psp124BI GAGCTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
PsuI RGATCY 1 cut(s) 79
SacI GAGCTC 1 cut(s) 13
SalI GTCGAC 1 cut(s) 89
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 1 cut(s) 79
ScrFI CCNGG 1 cut(s) 158
SduI GDGCHC 1 cut(s) 13
SetI ASST 4 cut(s) 13, 69, 159, 198
SfaNI GCATC 1 cut(s) 108
Sse9I AATT 1 cut(s) 57
SsiI CCGC 2 cut(s) 94, 99
SstI GAGCTC 1 cut(s) 13
StyD4I CCNGG 1 cut(s) 156
TaqI TCGA 1 cut(s) 90
TasI AATT 1 cut(s) 57
TfiI GAWTC 2 cut(s) 147, 175
TseI GCWGC 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.