Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0017437

Physical Location & Seq

Genomic Coordinates Reverse (-)

15724336 .. 15729695

Gene Structure 5360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG102500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGAGCTGGTTGCTTGCCGCCAGGCTCAATCACGCCGGCAGCGAACAAAACCACTGCAAGATGCTATTGACTCCTCATTTCCTTCAAAGGTTCAGCAAAGGAATAGTATCTATCGACAATCATCCTCATAAGGATATCATTGCAACTGGTGGGATTGATGAAAAGGTTGTGATCTTTGATTTAGCGTCAAACAAAGTCCTATCTACTCTTCATGGTCATTCAGACCGGGTTACTAGTGTTAGATTTGTGAGTCGTGATGATCTGTTCGTAACTGGGTCGGCTGACAAGACTGTTTGCATATGGAAAGGCTCTGATGATGGGAAGTATAAGTGCAACCTCACTTTGGAGAATCATACAGCTGAGGTGCGAGCTGTTACTGTACATCCCACAAATAACTACTTCGTGACTGCTTCTCTTGATAACACATGGTGTTTTTGTGATATTTCCAATGGAGAATGTCTGAGACAGGTCAAGGATGATTCAGTGTCTCAAGGTTATACATCTGCGGCCTTTCATCCAGATGGTGTCTTACTTGGAGTAGGCACCTCGGATCTCAAAATTTGGGATGTAAAAAGTCAGAGGGTGGTGAAAAGTCTTTGTCAACATGTTGGGGAAGTAACTTCCATCTCCTTCTCTGAAAATGGCAACTTTTTTGCGACTGCCGCTAGTGATGGTGTTAGATTGTGGGATAAGCGCAACTTAAGGAAATTCATATGGAGTGATCTTGGTACACGAACAAGCTGTGTTGAATTCGACTTCAGTGGAAGTTACCTTGCAGCTGCAGGCTCCTATAATACGAGAGTCTTCCGAGCTACTAGACGGGAGTCAAAATGGGAGACCATCAAAACTTTCACTTCCCTGACAGGTGAACAAACTAGCGTCAAATTTGGCCCAGATGCCCGATATATTGCAGTAGGATCAACAGACGGAGAAGAAAACCTCTGCACTTACTGTGAACATACCATCGAATATGACCGTGGTAGCCATCCCGCTGCTGATGTTGGGGGTGTGATGGTTTCCATCTTTGAGAGGGAGTGGGCAGAAGATATGGAGTTGGACTATGATAGTGACTTCTCAGGGGAAGAATCGGAGTTGGTATATGTCACGAAAAAGAAGAAAAAAAATGATGATGACACGGAGATGGAAAAAGTTGGGACCAAAAAGGAGAAAGATCTCGTAGAGGTGGAGGTGGAGGTGGAGGTGGAGGTGGAATATGAGACGGATTTGCTTTACAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0000349 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0000974 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0022607 GO:0022613 GO:0022618 GO:0030312 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032991 GO:0034622 GO:0034641 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0061630 GO:0061659 GO:0065003 GO:0070013 GO:0070534 GO:0070647 GO:0071006 GO:0071012 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0080008 GO:0090304 GO:0098542 GO:0140096 GO:1901360 GO:1901564 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 ko04120 map03040 map04120

Pfam Domains

Protein Families

Prp19 U-box WD40

Protein Analysis

412

Amino Acids

46.16

Weight (kDa)

5.11

Isoelectric Point (pI)

18.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	26 - 178	2.7e-24	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	27 - 110	3.8e-10	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	28 - 142	6.1e-11	WDR36/Utp21 first beta-propeller
Beta-prop_THOC3	PF25174	28 - 84	6.4e-06	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	30 - 183	5.3e-20	WDR3 first beta-propeller domain
Beta-prop_DCAF12	PF23760	31 - 131	2e-07	DDB1- and CUL4-associated factor 12 beta propeller
WDR55	PF24796	31 - 100	2.8e-06	WDR55
WD40_CDC20-Fz	PF24807	31 - 161	3.5e-14	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	32 - 309	2.1e-85	Prp19 WD40 domain
Beta-prop_EML	PF23409	33 - 231	7.3e-10	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_2nd	PF25172	36 - 142	6.7e-12	WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	41 - 102	1e-07	MABP1/WDR62 second WD40 domain
WD40_Gbeta	PF25391	46 - 185	1.1e-10	G protein beta WD-40 repeat protein
WD40	PF00400	65 - 101	5.7e-09	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	66 - 163	2.5e-08	CAF1B/HIR1 beta-propeller domain
EIF3I	PF24805	69 - 162	4.8e-10	EIF3I
Beta-prop_THOC3	PF25174	73 - 310	3.6e-35	THOC3 beta-propeller domain
WDR55	PF24796	75 - 226	3.6e-13	WDR55
Beta-prop_WDR5	PF25175	110 - 310	1.1e-20	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	116 - 269	1.1e-13	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	123 - 225	6.5e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	127 - 226	2.8e-06	WDR90/POC16, second beta-propeller
WD40_WDHD1_1st	PF24817	167 - 311	2.3e-09	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	167 - 255	1.9e-08	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	205 - 314	2.1e-07	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	217 - 319	3.3e-08	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017437)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr4g0402341 RchiOBHm_Chr4g0402351
rosa_laevigata	RLG00000009101
rosa_samantha	Rh4AG112100 Rh4BG104700 Rh4CG118900 Rh4DG101700 Rh4DG101800 Rh4DG101900 Rh4DG102000 Rh4DG102100 Rh4DG102500 Rh7DG037800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	542
AciI	CCGC	4 cut(s)	18, 506, 663, 990
AclWI	GGATC	2 cut(s)	558, 925
AcsI	RAATTY	4 cut(s)	558, 707, 749, 884
AcuI	CTGAAG	1 cut(s)	742
AdeI	CACNNNGTG	1 cut(s)	429
AfaI	GTAC	2 cut(s)	381, 730
AfiI	CCNNNNNNNGG	1 cut(s)	343
AflII	CTTAAG	1 cut(s)	700
AflIII	ACRYGT	1 cut(s)	604
AgsI	TTSAA	2 cut(s)	86, 749
AhlI	ACTAGT	1 cut(s)	233
AjnI	CCWGG	1 cut(s)	20
AluBI	AGCT	6 cut(s)	6, 359, 371, 741, 779, 812
AluI	AGCT	6 cut(s)	6, 359, 371, 741, 779, 812
Alw26I	GTCTC	4 cut(s)	457, 492, 830, 1211
AlwI	GGATC	2 cut(s)	558, 925
AoxI	GGCC	2 cut(s)	507, 889
ApeKI	GCWGC	4 cut(s)	39, 776, 779, 992
ApoI	RAATTY	4 cut(s)	558, 707, 749, 884
AspLEI	GCGC	1 cut(s)	696
AspS9I	GGNCC	2 cut(s)	890, 1155
AsuC2I	CCSGG	1 cut(s)	227
AsuHPI	GGTGA	2 cut(s)	598, 878
AvaII	GGWCC	1 cut(s)	1155
BanI	GGYRCC	1 cut(s)	542
BbsI	GAAGAC	1 cut(s)	796
BbvCI	CCTCAGC	1 cut(s)	360
BbvI	GCAGC	4 cut(s)	51, 766, 788, 979
BciT130I	CCWGG	1 cut(s)	22
BcnI	CCSGG	1 cut(s)	227
BcoDI	GTCTC	4 cut(s)	457, 492, 830, 1211
BcuI	ACTAGT	1 cut(s)	233
BfaI	CTAG	4 cut(s)	234, 666, 816, 876
BfmI	CTRYAG	1 cut(s)	780
BfrI	CTTAAG	1 cut(s)	700
BglII	AGATCT	1 cut(s)	1171
BisI	GCNGC	7 cut(s)	18, 40, 507, 663, 777, 780, 993
BlsI	GCNGC	7 cut(s)	19, 41, 508, 664, 778, 781, 994
Bme1390I	CCNGG	2 cut(s)	22, 227
Bme18I	GGWCC	1 cut(s)	1155
BmgT120I	GGNCC	2 cut(s)	890, 1155
BmiI	GGNNCC	3 cut(s)	544, 787, 1156
BmrFI	CCNGG	2 cut(s)	22, 227
BmrI	ACTGGG	1 cut(s)	282
BmsI	GCATC	2 cut(s)	51, 886
BmuI	ACTGGG	1 cut(s)	282
BoxI	GACNNNNGTC	1 cut(s)	823
BpiI	GAAGAC	1 cut(s)	796
Bpu10I	CCTNAGC	1 cut(s)	360
BpuEI	CTTGAG	1 cut(s)	474
BpuMI	CCSGG	1 cut(s)	227
BsaI	GGTCTC	1 cut(s)	830
BsaJI	CCNNGG	2 cut(s)	546, 976
Bsc4I	CCNNNNNNNGG	1 cut(s)	343
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	2 cut(s)	151, 277
Bse3DI	GCAATG	1 cut(s)	138
BseBI	CCWGG	1 cut(s)	22
BseDI	CCNNGG	2 cut(s)	546, 976
BseGI	GGATG	6 cut(s)	121, 382, 481, 514, 571, 985
BseLI	CCNNNNNNNGG	1 cut(s)	343
BseMI	GCAATG	1 cut(s)	138
BseMII	CTCAG	3 cut(s)	351, 452, 1089
BseNI	ACTGG	2 cut(s)	151, 277
BseRI	GAGGAG	1 cut(s)	63
BseXI	GCAGC	4 cut(s)	51, 766, 788, 979
BsgI	GTGCAG	1 cut(s)	928
BshFI	GGCC	2 cut(s)	509, 891
BshNI	GGYRCC	1 cut(s)	542
BsiSI	CCGG	2 cut(s)	36, 226
BslFI	GGGAC	1 cut(s)	1168
BslI	CCNNNNNNNGG	1 cut(s)	343
BsmAI	GTCTC	4 cut(s)	457, 492, 830, 1211
BsmBI	CGTCTC	1 cut(s)	1211
BsmFI	GGGAC	1 cut(s)	1168
BsnI	GGCC	2 cut(s)	509, 891
Bso31I	GGTCTC	1 cut(s)	830
Bsp1407I	TGTACA	1 cut(s)	379
Bsp143I	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
BspACI	CCGC	4 cut(s)	18, 506, 663, 990
BspANI	GGCC	2 cut(s)	509, 891
BspCNI	CTCAG	3 cut(s)	352, 453, 1088
BspLI	GGNNCC	3 cut(s)	544, 787, 1156
BspMAI	CTGCAG	1 cut(s)	784
BspPI	GGATC	2 cut(s)	558, 925
BspT107I	GGYRCC	1 cut(s)	542
BspTI	CTTAAG	1 cut(s)	700
BspTNI	GGTCTC	1 cut(s)	830
BsrDI	GCAATG	1 cut(s)	138
BsrFI	RCCGGY	1 cut(s)	35
BsrGI	TGTACA	1 cut(s)	379
BsrI	ACTGG	2 cut(s)	151, 277
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	2 cut(s)	546, 976
BssMI	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
Bst2UI	CCWGG	1 cut(s)	22
Bst4CI	ACNGT	4 cut(s)	292, 379, 953, 977
Bst6I	CTCTTC	1 cut(s)	213
BstAFI	CTTAAG	1 cut(s)	700
BstAUI	TGTACA	1 cut(s)	379
BstC8I	GCNNGC	4 cut(s)	15, 37, 369, 784
BstDEI	CTNAG	3 cut(s)	360, 461, 1075
BstDSI	CCRYGG	1 cut(s)	976
BstF5I	GGATG	6 cut(s)	121, 382, 481, 514, 571, 985
BstHHI	GCGC	1 cut(s)	696
BstKTI	GATC	6 cut(s)	174, 262, 553, 724, 920, 1174
BstMAI	GTCTC	4 cut(s)	457, 492, 830, 1211
BstMBI	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
BstMWI	GCNNNNNNNGC	1 cut(s)	662
BstNI	CCWGG	1 cut(s)	22
BstNSI	RCATGY	1 cut(s)	608
BstPAI	GACNNNNGTC	1 cut(s)	823
BstSCI	CCNGG	2 cut(s)	20, 225
BstSFI	CTRYAG	1 cut(s)	780
BstV1I	GCAGC	4 cut(s)	51, 766, 788, 979
BstV2I	GAAGAC	1 cut(s)	796
BstX2I	RGATCY	2 cut(s)	550, 1171
BstYI	RGATCY	2 cut(s)	550, 1171
BsuRI	GGCC	2 cut(s)	509, 891
BtgI	CCRYGG	1 cut(s)	976
BtsCI	GGATG	6 cut(s)	121, 382, 481, 514, 571, 985
BtsI	GCAGTG	1 cut(s)	52
BtsIMutI	CAGTG	3 cut(s)	52, 489, 766
Cac8I	GCNNGC	4 cut(s)	15, 37, 369, 784
CfoI	GCGC	1 cut(s)	696
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	890, 1155
CseI	GACGC	2 cut(s)	174, 868
Csp6I	GTAC	2 cut(s)	380, 729
CviAII	CATG	3 cut(s)	212, 426, 605
CviQI	GTAC	2 cut(s)	380, 729
DdeI	CTNAG	3 cut(s)	360, 461, 1075
DpnI	GATC	6 cut(s)	173, 261, 552, 723, 919, 1173
DpnII	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
DraIII	CACNNNGTG	1 cut(s)	429
Eam1104I	CTCTTC	1 cut(s)	213
EarI	CTCTTC	1 cut(s)	213
Eco31I	GGTCTC	1 cut(s)	830
Eco32I	GATATC	1 cut(s)	136
Eco47I	GGWCC	1 cut(s)	1155
Eco57I	CTGAAG	1 cut(s)	742
EcoRI	GAATTC	1 cut(s)	749
EcoRII	CCWGG	1 cut(s)	20
EcoRV	GATATC	1 cut(s)	136
Esp3I	CGTCTC	1 cut(s)	1211
FaeI	CATG	3 cut(s)	215, 429, 608
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	1 cut(s)	1168
FatI	CATG	3 cut(s)	211, 425, 604
FauI	CCCGC	1 cut(s)	997
FauNDI	CATATG	2 cut(s)	299, 713
Fnu4HI	GCNGC	7 cut(s)	18, 40, 507, 663, 777, 780, 993
FokI	GGATG	6 cut(s)	108, 369, 488, 501, 578, 972
Fsp4HI	GCNGC	7 cut(s)	18, 40, 507, 663, 777, 780, 993
FspBI	CTAG	4 cut(s)	234, 666, 816, 876
GlaI	GCGC	1 cut(s)	695
GluI	GCNGC	7 cut(s)	18, 40, 507, 663, 777, 780, 993
HaeIII	GGCC	2 cut(s)	509, 891
HapII	CCGG	2 cut(s)	36, 226
HgaI	GACGC	2 cut(s)	174, 868
HhaI	GCGC	1 cut(s)	696
Hin1II	CATG	3 cut(s)	215, 429, 608
Hin6I	GCGC	1 cut(s)	694
HinP1I	GCGC	1 cut(s)	694
HincII	GTYRAC	1 cut(s)	602
HindII	GTYRAC	1 cut(s)	602
HinfI	GANTC	7 cut(s)	70, 250, 349, 479, 801, 824, 1085
HpaII	CCGG	2 cut(s)	36, 226
HphI	GGTGA	2 cut(s)	598, 878
Hpy166II	GTNNAC	4 cut(s)	602, 731, 869, 956
Hpy188I	TCNGA	8 cut(s)	223, 313, 462, 550, 579, 637, 809, 1090
Hpy188III	TCNNGA	5 cut(s)	254, 403, 416, 518, 1105
Hpy8I	GTNNAC	4 cut(s)	602, 731, 869, 956
HpyAV	CCTTC	2 cut(s)	92, 640
HpyCH4III	ACNGT	4 cut(s)	292, 379, 953, 977
HpyCH4V	TGCA	8 cut(s)	57, 143, 297, 333, 776, 782, 911, 945
HpyF10VI	GCNNNNNNNGC	1 cut(s)	662
HpyF3I	CTNAG	3 cut(s)	360, 461, 1075
Hsp92II	CATG	3 cut(s)	215, 429, 608
HspAI	GCGC	1 cut(s)	694
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
Kzo9I	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
LmnI	GCTCC	1 cut(s)	791
Lsp1109I	GCAGC	4 cut(s)	51, 766, 788, 979
LweI	GCATC	2 cut(s)	51, 886
MaeI	CTAG	4 cut(s)	234, 666, 816, 876
MaeIII	GTNAC	8 cut(s)	229, 268, 373, 403, 616, 767, 1067, 1102
MalI	GATC	6 cut(s)	173, 261, 552, 723, 919, 1173
MboI	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
MboII	GAAGA	6 cut(s)	200, 796, 944, 1055, 1094, 1126
MfeI	CAATTG	1 cut(s)	1234
MflI	RGATCY	2 cut(s)	550, 1171
MluCI	AATT	5 cut(s)	558, 707, 749, 884, 1234
MlyI	GAGTC	4 cut(s)	64, 259, 810, 833
MmeI	TCCRAC	1 cut(s)	1035
MroNI	GCCGGC	1 cut(s)	35
MseI	TTAA	1 cut(s)	701
MslI	CAYNNNNRTG	2 cut(s)	519, 1139
MspA1I	CMGCKG	3 cut(s)	359, 779, 992
MspCI	CTTAAG	1 cut(s)	700
MspI	CCGG	2 cut(s)	36, 226
MspR9I	CCNGG	2 cut(s)	22, 227
MunI	CAATTG	1 cut(s)	1234
MvaI	CCWGG	1 cut(s)	22
MwoI	GCNNNNNNNGC	1 cut(s)	662
NaeI	GCCGGC	1 cut(s)	37
NciI	CCSGG	1 cut(s)	227
NdeI	CATATG	2 cut(s)	299, 713
NdeII	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	3 cut(s)	215, 429, 608
NlaIV	GGNNCC	3 cut(s)	544, 787, 1156
NmuCI	GTSAC	3 cut(s)	403, 1067, 1102
NspI	RCATGY	1 cut(s)	608
PciI	ACATGT	1 cut(s)	604
PcsI	WCGNNNNNNNCGW	1 cut(s)	39
PdiI	GCCGGC	1 cut(s)	37
PfeI	GAWTC	3 cut(s)	349, 479, 1085
PkrI	GCNGC	7 cut(s)	19, 41, 508, 664, 778, 781, 994
PleI	GAGTC	4 cut(s)	64, 258, 809, 832
PpsI	GAGTC	4 cut(s)	64, 258, 809, 832
PscI	ACATGT	1 cut(s)	604
PshAI	GACNNNNGTC	1 cut(s)	823
Psp6I	CCWGG	1 cut(s)	20
PspGI	CCWGG	1 cut(s)	20
PspN4I	GGNNCC	3 cut(s)	544, 787, 1156
PspPI	GGNCC	2 cut(s)	890, 1155
PstI	CTGCAG	1 cut(s)	784
PsuI	RGATCY	2 cut(s)	550, 1171
PvuII	CAGCTG	2 cut(s)	359, 779
RsaI	GTAC	2 cut(s)	381, 730
RsaNI	GTAC	2 cut(s)	380, 729
RseI	CAYNNNNRTG	2 cut(s)	519, 1139
SaqAI	TTAA	1 cut(s)	701
SatI	GCNGC	7 cut(s)	18, 40, 507, 663, 777, 780, 993
Sau3AI	GATC	6 cut(s)	171, 259, 550, 721, 917, 1171
Sau96I	GGNCC	2 cut(s)	890, 1155
SchI	GAGTC	4 cut(s)	64, 259, 810, 833
ScrFI	CCNGG	2 cut(s)	22, 227
SfaNI	GCATC	2 cut(s)	51, 886
SfcI	CTRYAG	1 cut(s)	780
SinI	GGWCC	1 cut(s)	1155
SmiMI	CAYNNNNRTG	2 cut(s)	519, 1139
SmlI	CTYRAG	2 cut(s)	489, 700
SmoI	CTYRAG	2 cut(s)	489, 700
SpeI	ACTAGT	1 cut(s)	233
Sse9I	AATT	5 cut(s)	558, 707, 749, 884, 1234
SsiI	CCGC	4 cut(s)	18, 506, 663, 990
SspMI	CTAG	4 cut(s)	234, 666, 816, 876
StyD4I	CCNGG	2 cut(s)	20, 225
TaaI	ACNGT	4 cut(s)	292, 379, 953, 977
TaqI	TCGA	3 cut(s)	114, 753, 966
TasI	AATT	5 cut(s)	558, 707, 749, 884, 1234
TatI	WGTACW	1 cut(s)	379
TauI	GCSGC	3 cut(s)	20, 509, 665
TfiI	GAWTC	3 cut(s)	349, 479, 1085
Tru1I	TTAA	1 cut(s)	701
Tru9I	TTAA	1 cut(s)	701
TscAI	CASTG	3 cut(s)	59, 489, 766
TseFI	GTSAC	3 cut(s)	403, 1067, 1102
TseI	GCWGC	4 cut(s)	39, 776, 779, 992
Tsp45I	GTSAC	3 cut(s)	403, 1067, 1102
TspDTI	ATGAA	4 cut(s)	174, 200, 503, 700
TspGWI	ACGGA	3 cut(s)	942, 1151, 1235
TspRI	CASTG	3 cut(s)	59, 489, 766
Vha464I	CTTAAG	1 cut(s)	700
VpaK11BI	GGWCC	1 cut(s)	1155
XapI	RAATTY	4 cut(s)	558, 707, 749, 884
XceI	RCATGY	1 cut(s)	608
XspI	CTAG	4 cut(s)	234, 666, 816, 876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.