Prolyl endopeptidase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G50380 AT1G50380 |
| fragaria_vesca | FvH4_4g37301 |
| malus_domestica | MD16G1004600.v1.1 |
| prunus_persica | Prupe.1G351000_v2.0.a1 Prupe.1G351200_v2.0.a1 Prupe.1G351200_v2.0.a1 |
| pyrus_communis | pycom16g00020 pycom16g00030 |
| rosa_chinensis | RchiOBHm_Chr4g0447131 RchiOBHm_Chr5g0037361 |
| rosa_laevigata | RLG00000005602 |
| rosa_multiflora | Rmu_ssc0000178.1_g000010 |
| rosa_roxburghii | Rroxscaffold_5G00387470 |
| rosa_rugosa | Rorug04G0378500 |
| rosa_samantha | Rh4AG439600 Rh4BG448700 Rh4CG465700 Rh4DG447100 |
| rosa_wichuraiana | Rw4G037610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1034, 1529 |
| AarI | CACCTGC | 1 cut(s) | 1227 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 251 |
| AatII | GACGTC | 2 cut(s) | 116, 255 |
| Acc36I | ACCTGC | 2 cut(s) | 1227, 2095 |
| AccI | GTMKAC | 2 cut(s) | 207, 445 |
| AccII | CGCG | 1 cut(s) | 228 |
| AccIII | TCCGGA | 1 cut(s) | 302 |
| AciI | CCGC | 3 cut(s) | 349, 372, 1665 |
| AcsI | RAATTY | 5 cut(s) | 314, 642, 1137, 1973, 2093 |
| AcuI | CTGAAG | 5 cut(s) | 975, 1086, 1235, 1730, 1920 |
| AcyI | GRCGYC | 3 cut(s) | 113, 252, 448 |
| AfaI | GTAC | 6 cut(s) | 72, 456, 483, 1289, 1489, 2078 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 771, 959, 1229, 2258 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 981, 2260 |
| AjiI | CACGTC | 1 cut(s) | 199 |
| Alw21I | GWGCWC | 3 cut(s) | 38, 682, 1480 |
| Alw26I | GTCTC | 1 cut(s) | 1840 |
| Ama87I | CYCGRG | 1 cut(s) | 518 |
| Aor13HI | TCCGGA | 1 cut(s) | 302 |
| AoxI | GGCC | 4 cut(s) | 104, 773, 950, 1192 |
| ApeKI | GCWGC | 1 cut(s) | 1865 |
| ApoI | RAATTY | 5 cut(s) | 314, 642, 1137, 1973, 2093 |
| AspA2I | CCTAGG | 1 cut(s) | 2257 |
| AspS9I | GGNCC | 2 cut(s) | 411, 503 |
| AsuHPI | GGTGA | 4 cut(s) | 1157, 1208, 1682, 1967 |
| AvaI | CYCGRG | 1 cut(s) | 518 |
| AvaII | GGWCC | 2 cut(s) | 411, 503 |
| AvrII | CCTAGG | 1 cut(s) | 2257 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 990, 1023 |
| BamHI | GGATCC | 1 cut(s) | 1279 |
| BanII | GRGCYC | 2 cut(s) | 38, 682 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1179, 1211 |
| BauI | CACGAG | 1 cut(s) | 2067 |
| BbsI | GAAGAC | 3 cut(s) | 1194, 1394, 2126 |
| Bbv12I | GWGCWC | 3 cut(s) | 38, 682, 1480 |
| BbvI | GCAGC | 1 cut(s) | 1852 |
| BccI | CCATC | 8 cut(s) | 175, 506, 983, 1020, 1309, 1478, 1532, 1793 |
| BceAI | ACGGC | 1 cut(s) | 1207 |
| BclI | TGATCA | 3 cut(s) | 1048, 1162, 1758 |
| BcoDI | GTCTC | 1 cut(s) | 1840 |
| BfaI | CTAG | 7 cut(s) | 419, 452, 698, 719, 1473, 2240, 2258 |
| BfmI | CTRYAG | 3 cut(s) | 1104, 1293, 1647 |
| BfuAI | ACCTGC | 2 cut(s) | 1227, 2095 |
| BglII | AGATCT | 1 cut(s) | 1581 |
| BisI | GCNGC | 1 cut(s) | 1866 |
| BlnI | CCTAGG | 1 cut(s) | 2257 |
| BlsI | GCNGC | 1 cut(s) | 1867 |
| BmcAI | AGTACT | 1 cut(s) | 72 |
| Bme18I | GGWCC | 2 cut(s) | 411, 503 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 981, 2260 |
| BmeT110I | CYCGRG | 1 cut(s) | 518 |
| BmgBI | CACGTC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 2 cut(s) | 411, 503 |
| BmiI | GGNNCC | 3 cut(s) | 471, 1281, 2085 |
| BmrI | ACTGGG | 1 cut(s) | 2165 |
| BmsI | GCATC | 8 cut(s) | 22, 499, 727, 751, 911, 931, 1582, 2197 |
| BmuI | ACTGGG | 1 cut(s) | 2165 |
| BpiI | GAAGAC | 3 cut(s) | 1194, 1394, 2126 |
| BpmI | CTGGAG | 3 cut(s) | 696, 1464, 1896 |
| Bpu10I | CCTNAGC | 1 cut(s) | 378 |
| BsaAI | YACGTR | 2 cut(s) | 1287, 1964 |
| BsaHI | GRCGYC | 3 cut(s) | 113, 252, 448 |
| BsaI | GGTCTC | 1 cut(s) | 1840 |
| BsaJI | CCNNGG | 2 cut(s) | 343, 2257 |
| BsaWI | WCCGGW | 2 cut(s) | 154, 302 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 664, 669, 694, 699, 1798, 1828 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 771, 959, 1229, 2258 |
| Bse1I | ACTGG | 4 cut(s) | 679, 1396, 1596, 2160 |
| Bse3DI | GCAATG | 1 cut(s) | 1550 |
| BseAI | TCCGGA | 1 cut(s) | 302 |
| BseDI | CCNNGG | 2 cut(s) | 343, 2257 |
| BseGI | GGATG | 7 cut(s) | 135, 367, 541, 766, 1231, 1620, 2133 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 771, 959, 1229, 2258 |
| BseMI | GCAATG | 1 cut(s) | 1550 |
| BseMII | CTCAG | 4 cut(s) | 81, 327, 369, 1505 |
| BseNI | ACTGG | 4 cut(s) | 679, 1396, 1596, 2160 |
| BseRI | GAGGAG | 6 cut(s) | 19, 135, 462, 504, 969, 1054 |
| BseXI | GCAGC | 1 cut(s) | 1852 |
| BseYI | CCCAGC | 1 cut(s) | 2162 |
| Bsh1236I | CGCG | 1 cut(s) | 228 |
| BshFI | GGCC | 4 cut(s) | 106, 775, 952, 1194 |
| BsiHKAI | GWGCWC | 3 cut(s) | 38, 682, 1480 |
| BsiHKCI | CYCGRG | 1 cut(s) | 518 |
| BsiSI | CCGG | 5 cut(s) | 103, 155, 303, 772, 1223 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 771, 959, 1229, 2258 |
| BsmAI | GTCTC | 1 cut(s) | 1840 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsnI | GGCC | 4 cut(s) | 106, 775, 952, 1194 |
| Bso31I | GGTCTC | 1 cut(s) | 1840 |
| BsoBI | CYCGRG | 1 cut(s) | 518 |
| Bsp1286I | GDGCHC | 3 cut(s) | 38, 682, 1480 |
| Bsp13I | TCCGGA | 1 cut(s) | 302 |
| Bsp1407I | TGTACA | 1 cut(s) | 481 |
| Bsp68I | TCGCGA | 1 cut(s) | 228 |
| BspACI | CCGC | 3 cut(s) | 349, 372, 1665 |
| BspANI | GGCC | 4 cut(s) | 106, 775, 952, 1194 |
| BspCNI | CTCAG | 4 cut(s) | 80, 328, 370, 1504 |
| BspEI | TCCGGA | 1 cut(s) | 302 |
| BspFNI | CGCG | 1 cut(s) | 228 |
| BspHI | TCATGA | 1 cut(s) | 835 |
| BspLI | GGNNCC | 3 cut(s) | 471, 1281, 2085 |
| BspMI | ACCTGC | 2 cut(s) | 1227, 2095 |
| BspTNI | GGTCTC | 1 cut(s) | 1840 |
| BsrDI | GCAATG | 1 cut(s) | 1550 |
| BsrGI | TGTACA | 1 cut(s) | 481 |
| BsrI | ACTGG | 4 cut(s) | 679, 1396, 1596, 2160 |
| BssECI | CCNNGG | 2 cut(s) | 343, 2257 |
| BssNI | GRCGYC | 3 cut(s) | 113, 252, 448 |
| BssSI | CACGAG | 1 cut(s) | 2067 |
| BssT1I | CCWWGG | 1 cut(s) | 2257 |
| Bst2BI | CACGAG | 1 cut(s) | 2067 |
| Bst4CI | ACNGT | 4 cut(s) | 652, 813, 1108, 1423 |
| Bst6I | CTCTTC | 1 cut(s) | 153 |
| BstACI | GRCGYC | 3 cut(s) | 113, 252, 448 |
| BstAUI | TGTACA | 1 cut(s) | 481 |
| BstBAI | YACGTR | 2 cut(s) | 1287, 1964 |
| BstC8I | GCNNGC | 2 cut(s) | 43, 730 |
| BstDEI | CTNAG | 5 cut(s) | 67, 309, 336, 378, 1491 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2256 |
| BstF5I | GGATG | 7 cut(s) | 135, 367, 541, 766, 1231, 1620, 2133 |
| BstFNI | CGCG | 1 cut(s) | 228 |
| BstMAI | GTCTC | 1 cut(s) | 1840 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 19, 42, 1871 |
| BstNSI | RCATGY | 1 cut(s) | 527 |
| BstSFI | CTRYAG | 3 cut(s) | 1104, 1293, 1647 |
| BstUI | CGCG | 1 cut(s) | 228 |
| BstV1I | GCAGC | 1 cut(s) | 1852 |
| BstV2I | GAAGAC | 3 cut(s) | 1194, 1394, 2126 |
| BstX2I | RGATCY | 6 cut(s) | 339, 1144, 1279, 1297, 1541, 1581 |
| BstYI | RGATCY | 6 cut(s) | 339, 1144, 1279, 1297, 1541, 1581 |
| BsuRI | GGCC | 4 cut(s) | 106, 775, 952, 1194 |
| BtgZI | GCGATG | 1 cut(s) | 747 |
| BtrI | CACGTC | 1 cut(s) | 199 |
| BtsCI | GGATG | 7 cut(s) | 135, 367, 541, 766, 1231, 1620, 2133 |
| BtsIMutI | CAGTG | 2 cut(s) | 672, 1089 |
| BtuMI | TCGCGA | 1 cut(s) | 228 |
| BveI | ACCTGC | 2 cut(s) | 1227, 2095 |
| Cac8I | GCNNGC | 2 cut(s) | 43, 730 |
| CciI | TCATGA | 1 cut(s) | 835 |
| Cfr13I | GGNCC | 2 cut(s) | 411, 503 |
| CseI | GACGC | 2 cut(s) | 456, 674 |
| Csp6I | GTAC | 6 cut(s) | 71, 455, 482, 1288, 1488, 2077 |
| CviAII | CATG | 8 cut(s) | 298, 485, 493, 524, 560, 786, 836, 1987 |
| CviQI | GTAC | 6 cut(s) | 71, 455, 482, 1288, 1488, 2077 |
| DdeI | CTNAG | 5 cut(s) | 67, 309, 336, 378, 1491 |
| DraI | TTTAAA | 2 cut(s) | 1603, 2146 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 251 |
| DriI | GACNNNNNGTC | 2 cut(s) | 981, 2260 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 251 |
| Eam1104I | CTCTTC | 1 cut(s) | 153 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 981, 2260 |
| EarI | CTCTTC | 1 cut(s) | 153 |
| EciI | GGCGGA | 1 cut(s) | 364 |
| Ecl136II | GAGCTC | 2 cut(s) | 36, 680 |
| Eco130I | CCWWGG | 1 cut(s) | 2257 |
| Eco147I | AGGCCT | 1 cut(s) | 952 |
| Eco24I | GRGCYC | 2 cut(s) | 38, 682 |
| Eco31I | GGTCTC | 1 cut(s) | 1840 |
| Eco47I | GGWCC | 2 cut(s) | 411, 503 |
| Eco53kI | GAGCTC | 2 cut(s) | 36, 680 |
| Eco57I | CTGAAG | 5 cut(s) | 975, 1086, 1235, 1730, 1920 |
| Eco88I | CYCGRG | 1 cut(s) | 518 |
| EcoICRI | GAGCTC | 2 cut(s) | 36, 680 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2256 |
| EcoO109I | RGGNCCY | 1 cut(s) | 411 |
| EcoRI | GAATTC | 1 cut(s) | 1973 |
| EcoT14I | CCWWGG | 1 cut(s) | 2257 |
| EcoT38I | GRGCYC | 2 cut(s) | 38, 682 |
| ErhI | CCWWGG | 1 cut(s) | 2257 |
| FaeI | CATG | 8 cut(s) | 301, 488, 496, 527, 563, 789, 839, 1990 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 948, 980, 1603, 1635 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FatI | CATG | 8 cut(s) | 297, 484, 492, 523, 559, 785, 835, 1986 |
| FauNDI | CATATG | 2 cut(s) | 616, 1003 |
| FbaI | TGATCA | 3 cut(s) | 1048, 1162, 1758 |
| FblI | GTMKAC | 2 cut(s) | 207, 445 |
| Fnu4HI | GCNGC | 1 cut(s) | 1866 |
| FokI | GGATG | 7 cut(s) | 142, 374, 548, 773, 1238, 1627, 2120 |
| FriOI | GRGCYC | 2 cut(s) | 38, 682 |
| Fsp4HI | GCNGC | 1 cut(s) | 1866 |
| FspBI | CTAG | 7 cut(s) | 419, 452, 698, 719, 1473, 2240, 2258 |
| GluI | GCNGC | 1 cut(s) | 1866 |
| GsaI | CCCAGC | 1 cut(s) | 2166 |
| GsuI | CTGGAG | 3 cut(s) | 696, 1464, 1896 |
| HaeIII | GGCC | 4 cut(s) | 106, 775, 952, 1194 |
| HapII | CCGG | 5 cut(s) | 103, 155, 303, 772, 1223 |
| HgaI | GACGC | 2 cut(s) | 456, 674 |
| Hin1I | GRCGYC | 3 cut(s) | 113, 252, 448 |
| Hin1II | CATG | 8 cut(s) | 301, 488, 496, 527, 563, 789, 839, 1990 |
| HincII | GTYRAC | 2 cut(s) | 446, 692 |
| HindII | GTYRAC | 2 cut(s) | 446, 692 |
| HindIII | AAGCTT | 3 cut(s) | 1532, 1605, 2195 |
| HinfI | GANTC | 9 cut(s) | 142, 233, 821, 924, 976, 1307, 1442, 1495, 2248 |
| HpaII | CCGG | 5 cut(s) | 103, 155, 303, 772, 1223 |
| HphI | GGTGA | 4 cut(s) | 1157, 1208, 1682, 1967 |
| Hpy166II | GTNNAC | 5 cut(s) | 208, 446, 692, 1513, 2153 |
| Hpy8I | GTNNAC | 5 cut(s) | 208, 446, 692, 1513, 2153 |
| Hpy99I | CGWCG | 5 cut(s) | 88, 118, 200, 233, 450 |
| HpyAV | CCTTC | 8 cut(s) | 160, 875, 950, 1513, 1797, 2221, 2227, 2233 |
| HpyCH4III | ACNGT | 4 cut(s) | 652, 813, 1108, 1423 |
| HpyCH4IV | ACGT | 5 cut(s) | 113, 198, 252, 1286, 1963 |
| HpyCH4V | TGCA | 4 cut(s) | 41, 581, 620, 902 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 19, 42, 1871 |
| HpyF3I | CTNAG | 5 cut(s) | 67, 309, 336, 378, 1491 |
| HpySE526I | ACGT | 5 cut(s) | 113, 198, 252, 1286, 1963 |
| Hsp92I | GRCGYC | 3 cut(s) | 113, 252, 448 |
| Hsp92II | CATG | 8 cut(s) | 301, 488, 496, 527, 563, 789, 839, 1990 |
| Kpn2I | TCCGGA | 1 cut(s) | 302 |
| Ksp22I | TGATCA | 3 cut(s) | 1048, 1162, 1758 |
| LmnI | GCTCC | 8 cut(s) | 63, 172, 245, 475, 517, 677, 685, 1483 |
| Lsp1109I | GCAGC | 1 cut(s) | 1852 |
| LweI | GCATC | 8 cut(s) | 22, 499, 727, 751, 911, 931, 1582, 2197 |
| MaeI | CTAG | 7 cut(s) | 419, 452, 698, 719, 1473, 2240, 2258 |
| MaeII | ACGT | 5 cut(s) | 113, 198, 252, 1286, 1963 |
| MaeIII | GTNAC | 8 cut(s) | 389, 706, 789, 818, 1204, 1453, 1704, 2044 |
| MfeI | CAATTG | 1 cut(s) | 1506 |
| MflI | RGATCY | 6 cut(s) | 339, 1144, 1279, 1297, 1541, 1581 |
| MhlI | GDGCHC | 3 cut(s) | 38, 682, 1480 |
| MlyI | GAGTC | 3 cut(s) | 136, 815, 970 |
| MmeI | TCCRAC | 3 cut(s) | 267, 1210, 1605 |
| MroI | TCCGGA | 1 cut(s) | 302 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1659 |
| MspI | CCGG | 5 cut(s) | 103, 155, 303, 772, 1223 |
| MunI | CAATTG | 1 cut(s) | 1506 |
| MvnI | CGCG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 19, 42, 1871 |
| NdeI | CATATG | 2 cut(s) | 616, 1003 |
| NlaIII | CATG | 8 cut(s) | 301, 488, 496, 527, 563, 789, 839, 1990 |
| NlaIV | GGNNCC | 3 cut(s) | 471, 1281, 2085 |
| NmuCI | GTSAC | 3 cut(s) | 389, 818, 1204 |
| NruI | TCGCGA | 1 cut(s) | 228 |
| NspI | RCATGY | 1 cut(s) | 527 |
| PagI | TCATGA | 1 cut(s) | 835 |
| PaqCI | CACCTGC | 1 cut(s) | 1227 |
| PceI | AGGCCT | 1 cut(s) | 952 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1283, 1584 |
| PfeI | GAWTC | 6 cut(s) | 233, 924, 1307, 1442, 1495, 2248 |
| PflFI | GACNNNGTC | 1 cut(s) | 115 |
| PkrI | GCNGC | 1 cut(s) | 1867 |
| PleI | GAGTC | 3 cut(s) | 136, 815, 970 |
| PpsI | GAGTC | 3 cut(s) | 136, 815, 970 |
| Ppu21I | YACGTR | 2 cut(s) | 1287, 1964 |
| PpuMI | RGGWCCY | 1 cut(s) | 411 |
| PsiI | TTATAA | 2 cut(s) | 1034, 1529 |
| Psp124BI | GAGCTC | 2 cut(s) | 38, 682 |
| Psp5II | RGGWCCY | 1 cut(s) | 411 |
| PspFI | CCCAGC | 1 cut(s) | 2162 |
| PspN4I | GGNNCC | 3 cut(s) | 471, 1281, 2085 |
| PspPI | GGNCC | 2 cut(s) | 411, 503 |
| PspPPI | RGGWCCY | 1 cut(s) | 411 |
| PsuI | RGATCY | 6 cut(s) | 339, 1144, 1279, 1297, 1541, 1581 |
| PsyI | GACNNNGTC | 1 cut(s) | 115 |
| RruI | TCGCGA | 1 cut(s) | 228 |
| RsaI | GTAC | 6 cut(s) | 72, 456, 483, 1289, 1489, 2078 |
| RsaNI | GTAC | 6 cut(s) | 71, 455, 482, 1288, 1488, 2077 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1659 |
| SacI | GAGCTC | 2 cut(s) | 38, 682 |
| SalI | GTCGAC | 1 cut(s) | 444 |
| SatI | GCNGC | 1 cut(s) | 1866 |
| Sau96I | GGNCC | 2 cut(s) | 411, 503 |
| ScaI | AGTACT | 1 cut(s) | 72 |
| SchI | GAGTC | 3 cut(s) | 136, 815, 970 |
| SduI | GDGCHC | 3 cut(s) | 38, 682, 1480 |
| SfaNI | GCATC | 8 cut(s) | 22, 499, 727, 751, 911, 931, 1582, 2197 |
| SfcI | CTRYAG | 3 cut(s) | 1104, 1293, 1647 |
| SinI | GGWCC | 2 cut(s) | 411, 503 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1659 |
| SseBI | AGGCCT | 1 cut(s) | 952 |
| SsiI | CCGC | 3 cut(s) | 349, 372, 1665 |
| SspI | AATATT | 2 cut(s) | 1754, 1772 |
| SspMI | CTAG | 7 cut(s) | 419, 452, 698, 719, 1473, 2240, 2258 |
| SstI | GAGCTC | 2 cut(s) | 38, 682 |
| StuI | AGGCCT | 1 cut(s) | 952 |
| StyI | CCWWGG | 1 cut(s) | 2257 |
| TaaI | ACNGT | 4 cut(s) | 652, 813, 1108, 1423 |
| TaiI | ACGT | 5 cut(s) | 116, 201, 255, 1289, 1966 |
| TaqI | TCGA | 2 cut(s) | 445, 1015 |
| TatI | WGTACW | 3 cut(s) | 70, 481, 2076 |
| TfiI | GAWTC | 6 cut(s) | 233, 924, 1307, 1442, 1495, 2248 |
| TscAI | CASTG | 2 cut(s) | 679, 1089 |
| TseFI | GTSAC | 3 cut(s) | 389, 818, 1204 |
| TseI | GCWGC | 1 cut(s) | 1865 |
| Tsp45I | GTSAC | 3 cut(s) | 389, 818, 1204 |
| TspDTI | ATGAA | 9 cut(s) | 654, 852, 1367, 1400, 2003, 2132, 2203, 2215, 2246 |
| TspRI | CASTG | 2 cut(s) | 679, 1089 |
| Tth111I | GACNNNGTC | 1 cut(s) | 115 |
| VpaK11BI | GGWCC | 2 cut(s) | 411, 503 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2256 |
| XapI | RAATTY | 5 cut(s) | 314, 642, 1137, 1973, 2093 |
| XbaI | TCTAGA | 2 cut(s) | 718, 2239 |
| XceI | RCATGY | 1 cut(s) | 527 |
| XmaJI | CCTAGG | 1 cut(s) | 2257 |
| XmiI | GTMKAC | 2 cut(s) | 207, 445 |
| XspI | CTAG | 7 cut(s) | 419, 452, 698, 719, 1473, 2240, 2258 |
| ZraI | GACGTC | 2 cut(s) | 114, 253 |
| ZrmI | AGTACT | 1 cut(s) | 72 |