Rh5BG194900

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
21596110 .. 21599383
3274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG194900.1

Sequence Viewer

Length: 1014 bp
ATGGTGCTTTTGTCTAAACCAGCTACTGAATACTGCTCTAGTTATAGCAGAAGCCTCAAGCTCTCCAAGTCATCCTCCTCTGGAATCCCTCTCATAGACCTGTCCAAACCAGACTCCAAACAACTCATTGTCAAGGCTTGTGAGGAGTTTGGATTCTTCAAAATCATCAACCATGGTGTTCCCATGGATTTCATTAACAGATTGGAATCTGAGGCCATCAAATTCTTCTCCTTGCCAGATTCTGAGAAAGAAAAAGCAGGGCCTGCTGATCCATTTGGATATGGCAGCAAGCATATCGGGAGAAATGGTGATGTGGGGTGGGTTGAGTACCTCCTTCTCAAAGCCAATACAGAAGCCAACTCTGACAGATTCAAATCAGTTTATGGAACAAACCCAGATGAGTTTTGTTCTGCTCTGAATGATTACATACAAGCTGTGAGGAATATGGCTTGTGAGATTCTTGACCTGATGGCTGAAGGATTGAATATTGGGCCAAGGAATGTGTTCAGTAAGTTTTTGTTGGATGAACAGAGTGACTCTTTATTCAGGCTCAATCACTACCCACCATGCCCAGAGCTTCAAGGCTTGAGTGAACATAGTGACAGAAATGTGGTTGGATTTGGAGAGCACACAGACCCTCAAATCATTTCCATACTAAGATCCAACAACACCTCTGGCCTTCAAATTTTGGGAGATGGGACTTGGATTTCAGTGCCTCCAGACCAGTACTCCTTCTTCATCAATGTTGGTGATTCTCTAAAGGTTTTGACAAATGGGAGGTTTCAAAGTGTGAGGCACAGGGTTTTAGCAAATGGGTCAAAATCAAGGGTTTCAATGATTTTCTTTGGGGGATCACCCTTGACTGAAAAAATAGCTCCATTGCCATCTGTAATGAAAGAAGAGGAACAGAGCATGTACAAAGAGTTCACATGGTTCGAATACAAAACGATCTGCTACCACTCAAGATTGGCTGACAATAGGCTAGGACACTTTGAGAGAATTGAAGCCTCATAA

Protein Analysis

337

Amino Acids

37.81

Weight (kDa)

5.81

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 29 - 127 7.9e-17 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 179 - 282 2.6e-29 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012870)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 263, 654, 859
AcsI RAATTY 2 cut(s) 221, 684
AcuI CTGAAG 1 cut(s) 495
AfaI GTAC 3 cut(s) 329, 728, 917
AgsI TTSAA 8 cut(s) 160, 373, 484, 581, 683, 785, 834, 1004
AluBI AGCT 5 cut(s) 23, 61, 434, 577, 875
AluI AGCT 5 cut(s) 23, 61, 434, 577, 875
Alw21I GWGCWC 1 cut(s) 630
AlwI GGATC 3 cut(s) 263, 654, 859
AlwNI CAGNNNCTG 3 cut(s) 26, 242, 263
AoxI GGCC 4 cut(s) 213, 260, 491, 676
ApeKI GCWGC 1 cut(s) 285
ApoI RAATTY 2 cut(s) 221, 684
Asp700I GAANNNNTTC 1 cut(s) 503
AspS9I GGNCC 2 cut(s) 260, 491
AsuHPI GGTGA 3 cut(s) 320, 761, 846
AsuII TTCGAA 1 cut(s) 936
BarI GAAGNNNNNNTAC 2 cut(s) 719, 751
Bbv12I GWGCWC 1 cut(s) 630
BbvI GCAGC 1 cut(s) 297
BccI CCATC 4 cut(s) 224, 463, 689, 892
BcgI CGANNNNNNTGC 2 cut(s) 277, 311
BfaI CTAG 2 cut(s) 39, 983
BisI GCNGC 1 cut(s) 286
BlsI GCNGC 1 cut(s) 287
BmcAI AGTACT 1 cut(s) 728
BmgT120I GGNCC 2 cut(s) 260, 491
BpmI CTGGAG 1 cut(s) 702
Bpu14I TTCGAA 1 cut(s) 936
BpuEI CTTGAG 3 cut(s) 41, 607, 946
BsaBI GATNNNNATC 2 cut(s) 205, 373
BsaJI CCNNGG 3 cut(s) 172, 183, 494
BsaXI ACNNNNNCTCC 4 cut(s) 292, 322, 713, 743
Bse1I ACTGG 1 cut(s) 724
Bse3DI GCAATG 1 cut(s) 878
Bse8I GATNNNNATC 2 cut(s) 205, 373
BseDI CCNNGG 3 cut(s) 172, 183, 494
BseGI GGATG 2 cut(s) 71, 529
BseJI GATNNNNATC 2 cut(s) 205, 373
BseMI GCAATG 1 cut(s) 878
BseMII CTCAG 2 cut(s) 201, 234
BseNI ACTGG 1 cut(s) 724
BseRI GAGGAG 2 cut(s) 67, 158
BseXI GCAGC 1 cut(s) 297
BshFI GGCC 4 cut(s) 215, 262, 493, 678
BsiHKAI GWGCWC 1 cut(s) 630
BslFI GGGAC 1 cut(s) 712
BsmFI GGGAC 1 cut(s) 712
BsnI GGCC 4 cut(s) 215, 262, 493, 678
Bsp119I TTCGAA 1 cut(s) 936
Bsp1286I GDGCHC 1 cut(s) 630
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 4 cut(s) 268, 659, 851, 948
Bsp19I CCATGG 2 cut(s) 172, 183
BspANI GGCC 4 cut(s) 215, 262, 493, 678
BspCNI CTCAG 2 cut(s) 202, 235
BspPI GGATC 3 cut(s) 263, 654, 859
BspT104I TTCGAA 1 cut(s) 936
BsrDI GCAATG 1 cut(s) 878
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 1 cut(s) 724
BssECI CCNNGG 3 cut(s) 172, 183, 494
BssMI GATC 4 cut(s) 268, 659, 851, 948
BssT1I CCWWGG 3 cut(s) 172, 183, 494
Bst6I CTCTTC 1 cut(s) 894
BstAPI GCANNNNNTGC 1 cut(s) 263
BstAUI TGTACA 1 cut(s) 915
BstBI TTCGAA 1 cut(s) 936
BstC8I GCNNGC 2 cut(s) 264, 290
BstDEI CTNAG 3 cut(s) 210, 243, 656
BstDSI CCRYGG 2 cut(s) 172, 183
BstF5I GGATG 2 cut(s) 71, 529
BstKTI GATC 4 cut(s) 271, 662, 854, 951
BstMBI GATC 4 cut(s) 268, 659, 851, 948
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstNSI RCATGY 1 cut(s) 916
BstV1I GCAGC 1 cut(s) 297
BstX2I RGATCY 1 cut(s) 659
BstYI RGATCY 1 cut(s) 659
BsuRI GGCC 4 cut(s) 215, 262, 493, 678
BtgI CCRYGG 2 cut(s) 172, 183
BtsCI GGATG 2 cut(s) 71, 529
BtsIMutI CAGTG 1 cut(s) 717
Cac8I GCNNGC 2 cut(s) 264, 290
CaiI CAGNNNCTG 3 cut(s) 26, 242, 263
Cfr13I GGNCC 2 cut(s) 260, 491
Csp6I GTAC 3 cut(s) 328, 727, 916
CviAII CATG 5 cut(s) 173, 184, 567, 913, 930
CviQI GTAC 3 cut(s) 328, 727, 916
DdeI CTNAG 3 cut(s) 210, 243, 656
DpnI GATC 4 cut(s) 270, 661, 853, 950
DpnII GATC 4 cut(s) 268, 659, 851, 948
Eam1104I CTCTTC 1 cut(s) 894
EarI CTCTTC 1 cut(s) 894
Eco130I CCWWGG 3 cut(s) 172, 183, 494
Eco57I CTGAAG 1 cut(s) 495
EcoO109I RGGNCCY 1 cut(s) 260
EcoT14I CCWWGG 3 cut(s) 172, 183, 494
ErhI CCWWGG 3 cut(s) 172, 183, 494
FaeI CATG 5 cut(s) 176, 187, 570, 916, 933
FaqI GGGAC 1 cut(s) 712
FatI CATG 5 cut(s) 172, 183, 566, 912, 929
Fnu4HI GCNGC 1 cut(s) 286
FokI GGATG 2 cut(s) 58, 536
Fsp4HI GCNGC 1 cut(s) 286
FspBI CTAG 2 cut(s) 39, 983
GluI GCNGC 1 cut(s) 286
GsuI CTGGAG 1 cut(s) 702
HaeIII GGCC 4 cut(s) 215, 262, 493, 678
Hin1II CATG 5 cut(s) 176, 187, 570, 916, 933
HinfI GANTC 9 cut(s) 84, 113, 153, 206, 239, 369, 457, 536, 752
HphI GGTGA 3 cut(s) 320, 761, 846
Hpy166II GTNNAC 2 cut(s) 593, 927
Hpy188I TCNGA 4 cut(s) 211, 244, 364, 417
Hpy188III TCNNGA 5 cut(s) 81, 298, 461, 719, 963
Hpy8I GTNNAC 2 cut(s) 593, 927
HpyAV CCTTC 4 cut(s) 344, 470, 689, 742
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
HpyF3I CTNAG 3 cut(s) 210, 243, 656
Hsp92II CATG 5 cut(s) 176, 187, 570, 916, 933
Kzo9I GATC 4 cut(s) 268, 659, 851, 948
LmnI GCTCC 1 cut(s) 880
Lsp1109I GCAGC 1 cut(s) 297
MaeI CTAG 2 cut(s) 39, 983
MaeIII GTNAC 2 cut(s) 533, 599
MalI GATC 4 cut(s) 270, 661, 853, 950
MboI GATC 4 cut(s) 268, 659, 851, 948
MboII GAAGA 4 cut(s) 148, 217, 727, 911
MflI RGATCY 1 cut(s) 659
MhlI GDGCHC 1 cut(s) 630
MluCI AATT 3 cut(s) 221, 684, 999
MlyI GAGTC 2 cut(s) 107, 530
MmeI TCCRAC 3 cut(s) 501, 595, 687
MroXI GAANNNNTTC 1 cut(s) 503
MseI TTAA 1 cut(s) 195
MwoI GCNNNNNNNGC 1 cut(s) 263
NcoI CCATGG 2 cut(s) 172, 183
NdeII GATC 4 cut(s) 268, 659, 851, 948
NlaIII CATG 5 cut(s) 176, 187, 570, 916, 933
NmuCI GTSAC 2 cut(s) 533, 599
NspI RCATGY 1 cut(s) 916
NspV TTCGAA 1 cut(s) 936
PdmI GAANNNNTTC 1 cut(s) 503
PfeI GAWTC 7 cut(s) 84, 153, 206, 239, 369, 457, 752
PkrI GCNGC 1 cut(s) 287
PleI GAGTC 2 cut(s) 107, 530
PpsI GAGTC 2 cut(s) 107, 530
PspPI GGNCC 2 cut(s) 260, 491
PsrI GAACNNNNNNTAC 2 cut(s) 908, 940
PstNI CAGNNNCTG 3 cut(s) 26, 242, 263
PsuI RGATCY 1 cut(s) 659
RsaI GTAC 3 cut(s) 329, 728, 917
RsaNI GTAC 3 cut(s) 328, 727, 916
SaqAI TTAA 1 cut(s) 195
SatI GCNGC 1 cut(s) 286
Sau3AI GATC 4 cut(s) 268, 659, 851, 948
Sau96I GGNCC 2 cut(s) 260, 491
ScaI AGTACT 1 cut(s) 728
SchI GAGTC 2 cut(s) 107, 530
SduI GDGCHC 1 cut(s) 630
SfuI TTCGAA 1 cut(s) 936
SmlI CTYRAG 3 cut(s) 56, 586, 961
SmoI CTYRAG 3 cut(s) 56, 586, 961
Sse9I AATT 3 cut(s) 221, 684, 999
SspI AATATT 1 cut(s) 487
SspMI CTAG 2 cut(s) 39, 983
StyI CCWWGG 3 cut(s) 172, 183, 494
TaqI TCGA 1 cut(s) 936
TasI AATT 3 cut(s) 221, 684, 999
TatI WGTACW 2 cut(s) 726, 915
TfiI GAWTC 7 cut(s) 84, 153, 206, 239, 369, 457, 752
Tru1I TTAA 1 cut(s) 195
Tru9I TTAA 1 cut(s) 195
TscAI CASTG 1 cut(s) 717
TseFI GTSAC 2 cut(s) 533, 599
TseI GCWGC 1 cut(s) 285
Tsp45I GTSAC 2 cut(s) 533, 599
TspDTI ATGAA 4 cut(s) 181, 540, 727, 908
TspRI CASTG 1 cut(s) 717
XapI RAATTY 2 cut(s) 221, 684
XceI RCATGY 1 cut(s) 916
XmnI GAANNNNTTC 1 cut(s) 503
XspI CTAG 2 cut(s) 39, 983
ZrmI AGTACT 1 cut(s) 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.