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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1269300.v1.1 |
| rosa_multiflora | Rmu_sc0003342.1_g000051 |
| rosa_roxburghii | Rroxscaffold_2G00104420 Rroxscaffold_2G00104430 |
| rosa_rugosa | Rorug02G0365600 |
| rosa_samantha | Rh2BG426700 Rh6BG210700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 63, 120 |
| AciI | CCGC | 1 cut(s) | 8 |
| AclWI | GGATC | 1 cut(s) | 143 |
| AcuI | CTGAAG | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 17 |
| AgsI | TTSAA | 6 cut(s) | 74, 100, 316, 341, 448, 460 |
| AjnI | CCWGG | 1 cut(s) | 387 |
| AluBI | AGCT | 2 cut(s) | 141, 239 |
| AluI | AGCT | 2 cut(s) | 141, 239 |
| AlwI | GGATC | 1 cut(s) | 143 |
| ApeKI | GCWGC | 2 cut(s) | 159, 269 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| BbvI | GCAGC | 2 cut(s) | 146, 256 |
| BciT130I | CCWGG | 1 cut(s) | 389 |
| BclI | TGATCA | 1 cut(s) | 241 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BisI | GCNGC | 2 cut(s) | 160, 270 |
| BlsI | GCNGC | 2 cut(s) | 161, 271 |
| Bme1390I | CCNGG | 1 cut(s) | 389 |
| BmrFI | CCNGG | 1 cut(s) | 389 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 1 cut(s) | 248 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 17 |
| Bse3DI | GCAATG | 1 cut(s) | 283 |
| BseBI | CCWGG | 1 cut(s) | 389 |
| BseDI | CCNNGG | 1 cut(s) | 248 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 17 |
| BseMI | GCAATG | 1 cut(s) | 283 |
| BseRI | GAGGAG | 1 cut(s) | 204 |
| BseXI | GCAGC | 2 cut(s) | 146, 256 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 17 |
| BsmI | GAATGC | 1 cut(s) | 161 |
| Bsp143I | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| BspACI | CCGC | 1 cut(s) | 8 |
| BspPI | GGATC | 1 cut(s) | 143 |
| BspQI | GCTCTTC | 1 cut(s) | 43 |
| BsrDI | GCAATG | 1 cut(s) | 283 |
| BssECI | CCNNGG | 1 cut(s) | 248 |
| BssMI | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| BssT1I | CCWWGG | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 1 cut(s) | 389 |
| Bst6I | CTCTTC | 2 cut(s) | 43, 363 |
| BstC8I | GCNNGC | 1 cut(s) | 274 |
| BstDEI | CTNAG | 1 cut(s) | 218 |
| BstKTI | GATC | 5 cut(s) | 52, 109, 151, 244, 382 |
| BstMBI | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 61, 118 |
| BstNI | CCWGG | 1 cut(s) | 389 |
| BstSCI | CCNGG | 1 cut(s) | 387 |
| BstV1I | GCAGC | 2 cut(s) | 146, 256 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| Cac8I | GCNNGC | 1 cut(s) | 274 |
| CseI | GACGC | 2 cut(s) | 53, 110 |
| CviAII | CATG | 2 cut(s) | 17, 477 |
| CviJI | RGCY | 2 cut(s) | 141, 239 |
| CviKI_1 | RGCY | 2 cut(s) | 141, 239 |
| DdeI | CTNAG | 1 cut(s) | 218 |
| DpnI | GATC | 5 cut(s) | 51, 108, 150, 243, 381 |
| DpnII | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 63, 120 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 63, 120 |
| Eam1104I | CTCTTC | 2 cut(s) | 43, 363 |
| EarI | CTCTTC | 2 cut(s) | 43, 363 |
| Eco130I | CCWWGG | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 1 cut(s) | 269 |
| EcoRII | CCWGG | 1 cut(s) | 387 |
| EcoT14I | CCWWGG | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 248 |
| FaeI | CATG | 2 cut(s) | 20, 480 |
| FaiI | YATR | 6 cut(s) | 18, 188, 294, 323, 395, 478 |
| FatI | CATG | 2 cut(s) | 16, 476 |
| FauI | CCCGC | 1 cut(s) | 15 |
| FbaI | TGATCA | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 2 cut(s) | 160, 270 |
| Fsp4HI | GCNGC | 2 cut(s) | 160, 270 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GluI | GCNGC | 2 cut(s) | 160, 270 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HgaI | GACGC | 2 cut(s) | 53, 110 |
| Hin1II | CATG | 2 cut(s) | 20, 480 |
| HinfI | GANTC | 2 cut(s) | 208, 232 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 126 |
| Hpy188III | TCNNGA | 3 cut(s) | 47, 144, 152 |
| HpyCH4V | TGCA | 2 cut(s) | 162, 276 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 61, 118 |
| HpyF3I | CTNAG | 1 cut(s) | 218 |
| Hsp92II | CATG | 2 cut(s) | 20, 480 |
| Ksp22I | TGATCA | 1 cut(s) | 241 |
| Kzo9I | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| LguI | GCTCTTC | 1 cut(s) | 43 |
| LpnPI | CCDG | 4 cut(s) | 129, 165, 374, 401 |
| Lsp1109I | GCAGC | 2 cut(s) | 146, 256 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MalI | GATC | 5 cut(s) | 51, 108, 150, 243, 381 |
| MboI | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| MboII | GAAGA | 3 cut(s) | 30, 275, 380 |
| MfeI | CAATTG | 1 cut(s) | 69 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MluCI | AATT | 2 cut(s) | 69, 100 |
| MmeI | TCCRAC | 2 cut(s) | 234, 417 |
| MnlI | CCTC | 4 cut(s) | 21, 222, 225, 319 |
| MseI | TTAA | 1 cut(s) | 306 |
| MspR9I | CCNGG | 1 cut(s) | 389 |
| MunI | CAATTG | 1 cut(s) | 69 |
| Mva1269I | GAATGC | 1 cut(s) | 161 |
| MvaI | CCWGG | 1 cut(s) | 389 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 61, 118 |
| NdeII | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| NlaIII | CATG | 2 cut(s) | 20, 480 |
| PciSI | GCTCTTC | 1 cut(s) | 43 |
| PctI | GAATGC | 1 cut(s) | 161 |
| PfeI | GAWTC | 2 cut(s) | 208, 232 |
| PfoI | TCCNGGA | 1 cut(s) | 387 |
| PkrI | GCNGC | 2 cut(s) | 161, 271 |
| Psp6I | CCWGG | 1 cut(s) | 387 |
| PspGI | CCWGG | 1 cut(s) | 387 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| SapI | GCTCTTC | 1 cut(s) | 43 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| SatI | GCNGC | 2 cut(s) | 160, 270 |
| Sau3AI | GATC | 5 cut(s) | 49, 106, 148, 241, 379 |
| ScrFI | CCNGG | 1 cut(s) | 389 |
| SetI | ASST | 6 cut(s) | 27, 84, 143, 241, 250, 330 |
| Sse9I | AATT | 2 cut(s) | 69, 100 |
| SsiI | CCGC | 1 cut(s) | 8 |
| SspMI | CTAG | 1 cut(s) | 47 |
| StyD4I | CCNGG | 1 cut(s) | 387 |
| StyI | CCWWGG | 1 cut(s) | 248 |
| TaqI | TCGA | 2 cut(s) | 13, 235 |
| TasI | AATT | 2 cut(s) | 69, 100 |
| TfiI | GAWTC | 2 cut(s) | 208, 232 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TseI | GCWGC | 2 cut(s) | 159, 269 |
| TspDTI | ATGAA | 2 cut(s) | 221, 410 |
| TspGWI | ACGGA | 1 cut(s) | 380 |
| XbaI | TCTAGA | 1 cut(s) | 46 |
| XspI | CTAG | 1 cut(s) | 47 |