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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G25130 |
| fragaria_vesca | FvH4_2g18490 |
| malus_domestica | MD05G1170600.v1.1 MD10G1158800.v1.1 |
| prunus_persica | Prupe.8G197900_v2.0.a1 |
| pyrus_communis | pycom05g15780 |
| rosa_chinensis | RchiOBHm_Chr6g0284001 |
| rosa_laevigata | RLG00000012779 |
| rosa_multiflora | Rmu_sc0003102.1_g000005 Rmu_ssc0000442.1_g000040 |
| rosa_rugosa | Rorug06G0159200 |
| rosa_samantha | Rh6AG272600 Rh6BG273200 Rh6CG274400 Rh6DG267600 |
| rosa_wichuraiana | Rw6G023470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1929 |
| AccB1I | GGYRCC | 1 cut(s) | 1929 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1457, 1511 |
| AclWI | GGATC | 3 cut(s) | 549, 954, 1407 |
| AcsI | RAATTY | 4 cut(s) | 262, 458, 1811, 1831 |
| AcuI | CTGAAG | 2 cut(s) | 990, 1113 |
| AfaI | GTAC | 7 cut(s) | 481, 530, 880, 1108, 1213, 1234, 1931 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 538, 649, 1457, 1511, 1732 |
| AgeI | ACCGGT | 1 cut(s) | 1214 |
| AgsI | TTSAA | 9 cut(s) | 593, 839, 1008, 1124, 1223, 1273, 1337, 1527, 1810 |
| AhlI | ACTAGT | 1 cut(s) | 1109 |
| AjnI | CCWGG | 1 cut(s) | 1465 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1817, 1849 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1507, 1539 |
| Alw21I | GWGCWC | 1 cut(s) | 662 |
| Alw26I | GTCTC | 6 cut(s) | 442, 1063, 1151, 1192, 1625, 1637 |
| AlwI | GGATC | 3 cut(s) | 549, 954, 1407 |
| AoxI | GGCC | 1 cut(s) | 1850 |
| ApeKI | GCWGC | 4 cut(s) | 126, 944, 1256, 1794 |
| ApoI | RAATTY | 4 cut(s) | 262, 458, 1811, 1831 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 685, 717, 1486, 1518 |
| AseI | ATTAAT | 2 cut(s) | 23, 1431 |
| AsiGI | ACCGGT | 1 cut(s) | 1214 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 570 |
| Asp718I | GGTACC | 1 cut(s) | 1929 |
| AspLEI | GCGC | 3 cut(s) | 91, 803, 1319 |
| AspS9I | GGNCC | 2 cut(s) | 1448, 1502 |
| AsuHPI | GGTGA | 7 cut(s) | 348, 394, 487, 884, 1438, 1619, 1900 |
| AvaII | GGWCC | 2 cut(s) | 1448, 1502 |
| AxyI | CCTNAGG | 1 cut(s) | 534 |
| BaeGI | GKGCMC | 1 cut(s) | 1842 |
| BanI | GGYRCC | 1 cut(s) | 1929 |
| BanII | GRGCYC | 2 cut(s) | 644, 662 |
| BbsI | GAAGAC | 1 cut(s) | 1709 |
| Bbv12I | GWGCWC | 1 cut(s) | 662 |
| BbvI | GCAGC | 4 cut(s) | 113, 956, 1268, 1781 |
| BccI | CCATC | 3 cut(s) | 330, 1592, 1887 |
| BceAI | ACGGC | 1 cut(s) | 102 |
| BciT130I | CCWGG | 1 cut(s) | 1467 |
| BclI | TGATCA | 3 cut(s) | 178, 559, 688 |
| BcoDI | GTCTC | 6 cut(s) | 442, 1063, 1151, 1192, 1625, 1637 |
| BcuI | ACTAGT | 1 cut(s) | 1109 |
| BfaI | CTAG | 5 cut(s) | 270, 1110, 1152, 1260, 1445 |
| BfoI | RGCGCY | 2 cut(s) | 92, 804 |
| BisI | GCNGC | 4 cut(s) | 127, 945, 1257, 1795 |
| BlpI | GCTNAGC | 1 cut(s) | 925 |
| BlsI | GCNGC | 4 cut(s) | 128, 946, 1258, 1796 |
| BmcAI | AGTACT | 1 cut(s) | 1108 |
| Bme1390I | CCNGG | 1 cut(s) | 1467 |
| Bme18I | GGWCC | 2 cut(s) | 1448, 1502 |
| BmgT120I | GGNCC | 2 cut(s) | 1448, 1502 |
| BmiI | GGNNCC | 2 cut(s) | 1503, 1931 |
| BmrFI | CCNGG | 1 cut(s) | 1467 |
| BmrI | ACTGGG | 1 cut(s) | 638 |
| BmsI | GCATC | 5 cut(s) | 667, 799, 931, 1054, 1594 |
| BmuI | ACTGGG | 1 cut(s) | 638 |
| BpiI | GAAGAC | 1 cut(s) | 1709 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 925 |
| BpuEI | CTTGAG | 1 cut(s) | 353 |
| BsaBI | GATNNNNATC | 2 cut(s) | 183, 1417 |
| BsaJI | CCNNGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| BsaWI | WCCGGW | 1 cut(s) | 1214 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 348, 378, 424, 454, 1507, 1537 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 538, 649, 1457, 1511, 1732 |
| Bse118I | RCCGGY | 1 cut(s) | 1214 |
| Bse1I | ACTGG | 6 cut(s) | 644, 831, 859, 963, 1086, 1779 |
| Bse21I | CCTNAGG | 1 cut(s) | 534 |
| Bse3DI | GCAATG | 2 cut(s) | 1105, 1485 |
| Bse8I | GATNNNNATC | 2 cut(s) | 183, 1417 |
| BseBI | CCWGG | 1 cut(s) | 1467 |
| BseDI | CCNNGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| BseGI | GGATG | 3 cut(s) | 322, 1603, 1898 |
| BseJI | GATNNNNATC | 2 cut(s) | 183, 1417 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 538, 649, 1457, 1511, 1732 |
| BseMI | GCAATG | 2 cut(s) | 1105, 1485 |
| BseMII | CTCAG | 4 cut(s) | 675, 939, 1304, 1830 |
| BseNI | ACTGG | 6 cut(s) | 644, 831, 859, 963, 1086, 1779 |
| BseRI | GAGGAG | 6 cut(s) | 238, 356, 599, 1378, 1592, 1617 |
| BseSI | GKGCMC | 1 cut(s) | 1842 |
| BseXI | GCAGC | 4 cut(s) | 113, 956, 1268, 1781 |
| BshFI | GGCC | 1 cut(s) | 1852 |
| BshNI | GGYRCC | 1 cut(s) | 1929 |
| BshTI | ACCGGT | 1 cut(s) | 1214 |
| BsiHKAI | GWGCWC | 1 cut(s) | 662 |
| BsiSI | CCGG | 1 cut(s) | 1215 |
| BslFI | GGGAC | 1 cut(s) | 304 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 538, 649, 1457, 1511, 1732 |
| BsmAI | GTCTC | 6 cut(s) | 442, 1063, 1151, 1192, 1625, 1637 |
| BsmFI | GGGAC | 1 cut(s) | 304 |
| BsnI | GGCC | 1 cut(s) | 1852 |
| Bsp1286I | GDGCHC | 3 cut(s) | 644, 662, 1842 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 925 |
| Bsp19I | CCATGG | 1 cut(s) | 1422 |
| BspANI | GGCC | 1 cut(s) | 1852 |
| BspCNI | CTCAG | 4 cut(s) | 674, 938, 1305, 1829 |
| BspHI | TCATGA | 1 cut(s) | 562 |
| BspLI | GGNNCC | 2 cut(s) | 1503, 1931 |
| BspPI | GGATC | 3 cut(s) | 549, 954, 1407 |
| BspT107I | GGYRCC | 1 cut(s) | 1929 |
| BsrDI | GCAATG | 2 cut(s) | 1105, 1485 |
| BsrFI | RCCGGY | 1 cut(s) | 1214 |
| BsrI | ACTGG | 6 cut(s) | 644, 831, 859, 963, 1086, 1779 |
| BssAI | RCCGGY | 1 cut(s) | 1214 |
| BssECI | CCNNGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| BssT1I | CCWWGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| Bst2UI | CCWGG | 1 cut(s) | 1467 |
| Bst4CI | ACNGT | 4 cut(s) | 68, 436, 701, 1162 |
| Bst6I | CTCTTC | 3 cut(s) | 561, 1287, 1749 |
| BstC8I | GCNNGC | 4 cut(s) | 1564, 1568, 1799, 1803 |
| BstDEI | CTNAG | 5 cut(s) | 534, 661, 925, 1313, 1816 |
| BstDSI | CCRYGG | 1 cut(s) | 1422 |
| BstF5I | GGATG | 3 cut(s) | 322, 1603, 1898 |
| BstH2I | RGCGCY | 2 cut(s) | 92, 804 |
| BstHHI | GCGC | 3 cut(s) | 91, 803, 1319 |
| BstMAI | GTCTC | 6 cut(s) | 442, 1063, 1151, 1192, 1625, 1637 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 677, 809, 1133 |
| BstNI | CCWGG | 1 cut(s) | 1467 |
| BstNSI | RCATGY | 2 cut(s) | 1566, 1624 |
| BstSCI | CCNGG | 1 cut(s) | 1465 |
| BstSLI | GKGCMC | 1 cut(s) | 1842 |
| BstV1I | GCAGC | 4 cut(s) | 113, 956, 1268, 1781 |
| BstV2I | GAAGAC | 1 cut(s) | 1709 |
| BstX2I | RGATCY | 2 cut(s) | 959, 1412 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1423 |
| BstYI | RGATCY | 2 cut(s) | 959, 1412 |
| Bsu36I | CCTNAGG | 1 cut(s) | 534 |
| BsuRI | GGCC | 1 cut(s) | 1852 |
| BtgI | CCRYGG | 1 cut(s) | 1422 |
| BtsCI | GGATG | 3 cut(s) | 322, 1603, 1898 |
| BtsI | GCAGTG | 1 cut(s) | 405 |
| BtsIMutI | CAGTG | 3 cut(s) | 405, 432, 1310 |
| Cac8I | GCNNGC | 4 cut(s) | 1564, 1568, 1799, 1803 |
| CciI | TCATGA | 1 cut(s) | 562 |
| CfoI | GCGC | 3 cut(s) | 91, 803, 1319 |
| Cfr10I | RCCGGY | 1 cut(s) | 1214 |
| Cfr13I | GGNCC | 2 cut(s) | 1448, 1502 |
| CseI | GACGC | 1 cut(s) | 1202 |
| Csp6I | GTAC | 7 cut(s) | 480, 529, 879, 1107, 1212, 1233, 1930 |
| CspAI | ACCGGT | 1 cut(s) | 1214 |
| CviAII | CATG | 8 cut(s) | 299, 563, 1131, 1423, 1563, 1621, 1843, 1904 |
| CviQI | GTAC | 7 cut(s) | 480, 529, 879, 1107, 1212, 1233, 1930 |
| DdeI | CTNAG | 5 cut(s) | 534, 661, 925, 1313, 1816 |
| Eam1104I | CTCTTC | 3 cut(s) | 561, 1287, 1749 |
| EarI | CTCTTC | 3 cut(s) | 561, 1287, 1749 |
| Ecl136II | GAGCTC | 1 cut(s) | 660 |
| Eco130I | CCWWGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| Eco24I | GRGCYC | 2 cut(s) | 644, 662 |
| Eco47I | GGWCC | 2 cut(s) | 1448, 1502 |
| Eco53kI | GAGCTC | 1 cut(s) | 660 |
| Eco57I | CTGAAG | 2 cut(s) | 990, 1113 |
| Eco81I | CCTNAGG | 1 cut(s) | 534 |
| EcoICRI | GAGCTC | 1 cut(s) | 660 |
| EcoRII | CCWGG | 1 cut(s) | 1465 |
| EcoT14I | CCWWGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| EcoT38I | GRGCYC | 2 cut(s) | 644, 662 |
| ErhI | CCWWGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| FaeI | CATG | 8 cut(s) | 302, 566, 1134, 1426, 1566, 1624, 1846, 1907 |
| FaqI | GGGAC | 1 cut(s) | 304 |
| FatI | CATG | 8 cut(s) | 298, 562, 1130, 1422, 1562, 1620, 1842, 1903 |
| FauNDI | CATATG | 1 cut(s) | 1636 |
| FbaI | TGATCA | 3 cut(s) | 178, 559, 688 |
| Fnu4HI | GCNGC | 4 cut(s) | 127, 945, 1257, 1795 |
| FokI | GGATG | 3 cut(s) | 309, 1610, 1905 |
| FriOI | GRGCYC | 2 cut(s) | 644, 662 |
| Fsp4HI | GCNGC | 4 cut(s) | 127, 945, 1257, 1795 |
| FspBI | CTAG | 5 cut(s) | 270, 1110, 1152, 1260, 1445 |
| GlaI | GCGC | 3 cut(s) | 90, 802, 1318 |
| GluI | GCNGC | 4 cut(s) | 127, 945, 1257, 1795 |
| HaeII | RGCGCY | 2 cut(s) | 92, 804 |
| HaeIII | GGCC | 1 cut(s) | 1852 |
| HapII | CCGG | 1 cut(s) | 1215 |
| HgaI | GACGC | 1 cut(s) | 1202 |
| HhaI | GCGC | 3 cut(s) | 91, 803, 1319 |
| Hin1II | CATG | 8 cut(s) | 302, 566, 1134, 1426, 1566, 1624, 1846, 1907 |
| Hin6I | GCGC | 3 cut(s) | 89, 801, 1317 |
| HinP1I | GCGC | 3 cut(s) | 89, 801, 1317 |
| HincII | GTYRAC | 1 cut(s) | 1723 |
| HindII | GTYRAC | 1 cut(s) | 1723 |
| HindIII | AAGCTT | 5 cut(s) | 371, 622, 1002, 1125, 1568 |
| HinfI | GANTC | 4 cut(s) | 1027, 1370, 1487, 1649 |
| HpaII | CCGG | 1 cut(s) | 1215 |
| HphI | GGTGA | 7 cut(s) | 348, 394, 487, 884, 1438, 1619, 1900 |
| Hpy166II | GTNNAC | 1 cut(s) | 1723 |
| Hpy188III | TCNNGA | 8 cut(s) | 176, 563, 836, 968, 1091, 1220, 1675, 1864 |
| Hpy8I | GTNNAC | 1 cut(s) | 1723 |
| HpyAV | CCTTC | 9 cut(s) | 165, 833, 863, 965, 1088, 1217, 1545, 1604, 1842 |
| HpyCH4III | ACNGT | 4 cut(s) | 68, 436, 701, 1162 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 677, 809, 1133 |
| HpyF3I | CTNAG | 5 cut(s) | 534, 661, 925, 1313, 1816 |
| Hsp92II | CATG | 8 cut(s) | 302, 566, 1134, 1426, 1566, 1624, 1846, 1907 |
| HspAI | GCGC | 3 cut(s) | 89, 801, 1317 |
| KpnI | GGTACC | 1 cut(s) | 1933 |
| Ksp22I | TGATCA | 3 cut(s) | 178, 559, 688 |
| LmnI | GCTCC | 1 cut(s) | 586 |
| Lsp1109I | GCAGC | 4 cut(s) | 113, 956, 1268, 1781 |
| LweI | GCATC | 5 cut(s) | 667, 799, 931, 1054, 1594 |
| MaeI | CTAG | 5 cut(s) | 270, 1110, 1152, 1260, 1445 |
| MaeIII | GTNAC | 4 cut(s) | 493, 695, 1050, 1906 |
| MfeI | CAATTG | 4 cut(s) | 684, 1071, 1200, 1787 |
| MflI | RGATCY | 2 cut(s) | 959, 1412 |
| MhlI | GDGCHC | 3 cut(s) | 644, 662, 1842 |
| MmeI | TCCRAC | 2 cut(s) | 846, 1230 |
| MroXI | GAANNNNTTC | 1 cut(s) | 570 |
| MseI | TTAA | 2 cut(s) | 23, 1431 |
| MslI | CAYNNNNRTG | 4 cut(s) | 227, 549, 1561, 1590 |
| MspI | CCGG | 1 cut(s) | 1215 |
| MspR9I | CCNGG | 1 cut(s) | 1467 |
| MunI | CAATTG | 4 cut(s) | 684, 1071, 1200, 1787 |
| MvaI | CCWGG | 1 cut(s) | 1467 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 677, 809, 1133 |
| NcoI | CCATGG | 1 cut(s) | 1422 |
| NdeI | CATATG | 1 cut(s) | 1636 |
| NlaIII | CATG | 8 cut(s) | 302, 566, 1134, 1426, 1566, 1624, 1846, 1907 |
| NlaIV | GGNNCC | 2 cut(s) | 1503, 1931 |
| NmuCI | GTSAC | 3 cut(s) | 493, 1050, 1906 |
| NspI | RCATGY | 2 cut(s) | 1566, 1624 |
| PaeI | GCATGC | 1 cut(s) | 1566 |
| PagI | TCATGA | 1 cut(s) | 562 |
| PdmI | GAANNNNTTC | 1 cut(s) | 570 |
| PfeI | GAWTC | 4 cut(s) | 1027, 1370, 1487, 1649 |
| PflFI | GACNNNGTC | 1 cut(s) | 1681 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1457, 1511 |
| PinAI | ACCGGT | 1 cut(s) | 1214 |
| PkrI | GCNGC | 4 cut(s) | 128, 946, 1258, 1796 |
| PshBI | ATTAAT | 2 cut(s) | 23, 1431 |
| Psp124BI | GAGCTC | 1 cut(s) | 662 |
| Psp6I | CCWGG | 1 cut(s) | 1465 |
| PspGI | CCWGG | 1 cut(s) | 1465 |
| PspN4I | GGNNCC | 2 cut(s) | 1503, 1931 |
| PspPI | GGNCC | 2 cut(s) | 1448, 1502 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 967, 999 |
| PsuI | RGATCY | 2 cut(s) | 959, 1412 |
| PsyI | GACNNNGTC | 1 cut(s) | 1681 |
| RsaI | GTAC | 7 cut(s) | 481, 530, 880, 1108, 1213, 1234, 1931 |
| RsaNI | GTAC | 7 cut(s) | 480, 529, 879, 1107, 1212, 1233, 1930 |
| RseI | CAYNNNNRTG | 4 cut(s) | 227, 549, 1561, 1590 |
| SacI | GAGCTC | 1 cut(s) | 662 |
| SaqAI | TTAA | 2 cut(s) | 23, 1431 |
| SatI | GCNGC | 4 cut(s) | 127, 945, 1257, 1795 |
| Sau96I | GGNCC | 2 cut(s) | 1448, 1502 |
| ScaI | AGTACT | 1 cut(s) | 1108 |
| ScrFI | CCNGG | 1 cut(s) | 1467 |
| SduI | GDGCHC | 3 cut(s) | 644, 662, 1842 |
| SfaNI | GCATC | 5 cut(s) | 667, 799, 931, 1054, 1594 |
| SinI | GGWCC | 2 cut(s) | 1448, 1502 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 227, 549, 1561, 1590 |
| SmlI | CTYRAG | 1 cut(s) | 368 |
| SmoI | CTYRAG | 1 cut(s) | 368 |
| SpeI | ACTAGT | 1 cut(s) | 1109 |
| SphI | GCATGC | 1 cut(s) | 1566 |
| SspMI | CTAG | 5 cut(s) | 270, 1110, 1152, 1260, 1445 |
| SstI | GAGCTC | 1 cut(s) | 662 |
| StyD4I | CCNGG | 1 cut(s) | 1465 |
| StyI | CCWWGG | 4 cut(s) | 1374, 1422, 1456, 1872 |
| TaaI | ACNGT | 4 cut(s) | 68, 436, 701, 1162 |
| TaqI | TCGA | 3 cut(s) | 574, 582, 1326 |
| TatI | WGTACW | 2 cut(s) | 878, 1106 |
| TfiI | GAWTC | 4 cut(s) | 1027, 1370, 1487, 1649 |
| Tru1I | TTAA | 2 cut(s) | 23, 1431 |
| Tru9I | TTAA | 2 cut(s) | 23, 1431 |
| TscAI | CASTG | 3 cut(s) | 412, 439, 1317 |
| TseFI | GTSAC | 3 cut(s) | 493, 1050, 1906 |
| TseI | GCWGC | 4 cut(s) | 126, 944, 1256, 1794 |
| Tsp45I | GTSAC | 3 cut(s) | 493, 1050, 1906 |
| TspRI | CASTG | 3 cut(s) | 412, 439, 1317 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1681 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1457, 1511 |
| VpaK11BI | GGWCC | 2 cut(s) | 1448, 1502 |
| VspI | ATTAAT | 2 cut(s) | 23, 1431 |
| XapI | RAATTY | 4 cut(s) | 262, 458, 1811, 1831 |
| XceI | RCATGY | 2 cut(s) | 1566, 1624 |
| XmnI | GAANNNNTTC | 1 cut(s) | 570 |
| XspI | CTAG | 5 cut(s) | 270, 1110, 1152, 1260, 1445 |
| ZrmI | AGTACT | 1 cut(s) | 1108 |