Rh7BG036700

Dehydrogenase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
2368190 .. 2373492
5303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG036700.1

Sequence Viewer

Length: 1287 bp
ATGCTTTCTCTGCCAAAGGTTGCTGATTTCTTTACAAGGTTAATTCAAAGGGTTGCTCCAAAGAGCTACCAGCAGGCCTATGCTGAAGTTTATGTAACTCAAAAGTTTCTGGAGAATTTCTCTGGTGATCAGGTCCGCTTCCTTGCAAGGTCTTTCGGGGTGCCTGGAAATCATCTTGGCCAGCAAAGTAATGGTTACCGTTGGCCTTACGGTCCTGTTGCAGTAATTACTCCCTTCAATTTTCCACTAGAAATTCCCGTACTTCAGTTGATGGGTGCACTCTACATGGGTAACAAACCAATTCTAAAAGTGGATAGCAAGGTAAGCCTTGTTATGGACCAAATGATGAGGCTGCTTCATTACTGTGGGTTACCAGTAGAGGATGTTGACTTCATCAATTCTGATGGGAAGACAATGAACAAACTATTATTGGAGGCAAATCCACGAATGACCCTCTTCACTGGTAGCTCAAGAGTAGCAGAGAAGTTGGCTGCTGACCTGAAGGGACGTGTTAAATTAGAAGATGCAGGATTTGACTGGAAGATATTAGGGCCTGACGTTCATGAGGAGGACTATGTTGCGTGGGTCTGTGATCAGGATGCATATGCATGCAGTGGCCAAAAGTGCTCTGCACAATCAATTCTCTTCATGCATGAGAACTGGTCTAAGACTTCACTTCTATCCAAAATGAAAGATCTGGCTGAGAGAAGGAAGTTAGAAGATTTAACAATTGGCCCTGTCCTAACATTGACAACTGAAACAATGCTAGATCATGCGAATAAATTGCTTCAGATACCAGGTTCAAAGCTACTCTTTGGGGGTGAACCTTTAGAGAATCATTCCATTCCACCTGTATATGGTGCTATTAAGCCTACGGCTATTTATGTTCCACTTGAAGAAATGTTGAAGGAAAATAACTATGAACTTGTAACAAGAGAAATTTTTGGGCCATTTCAGGTTGTCACTGAGTATAAGAAAGATCAACTCCCATTGGTGTTAGATGCTCTAGAGAGGATGCATGCACATTTAACAGCTGCTGTCGTGTCAAACGACCCCCACTTTCAACAGGAAGTTCTTGGCAACACAGTGAACGGGACTACTTATGCTGGACTGAGAGCAAGAACAACTGGCGCTCCACAGAACCACTGGTTTGGACCAGCTGGAGATCCGCTGGGTGCTGGCATCGGAACTCCGGAAGCAATAAAGCTCGTTTGGTCATGCCATAGAGAAATCATCTATGATGTCGGTCCAATGCCAAAGCAGTGGGAACTTCCACCTTCTACTTAA

Protein Analysis

428

Amino Acids

47.82

Weight (kDa)

5.91

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 9 - 369 5.2e-36 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 160
AccIII TCCGGA 1 cut(s) 1192
AciI CCGC 2 cut(s) 136, 1169
AclWI GGATC 1 cut(s) 1160
AcoI YGGCCR 2 cut(s) 178, 616
AcsI RAATTY 3 cut(s) 115, 252, 939
AcuI CTGAAG 4 cut(s) 105, 248, 521, 773
AfaI GTAC 1 cut(s) 261
AfiI CCNNNNNNNGG 2 cut(s) 334, 857
AflIII ACRYGT 1 cut(s) 508
AgsI TTSAA 6 cut(s) 47, 238, 804, 896, 907, 1064
AjiI CACGTC 1 cut(s) 509
AjnI CCWGG 2 cut(s) 163, 796
AluBI AGCT 6 cut(s) 66, 468, 808, 1034, 1160, 1207
AluI AGCT 6 cut(s) 66, 468, 808, 1034, 1160, 1207
Alw21I GWGCWC 2 cut(s) 280, 629
Alw44I GTGCAC 1 cut(s) 276
AlwI GGATC 1 cut(s) 1160
AlwNI CAGNNNCTG 1 cut(s) 1037
Aor13HI TCCGGA 1 cut(s) 1192
AoxI GGCC 7 cut(s) 75, 178, 203, 551, 616, 733, 947
ApaLI GTGCAC 1 cut(s) 276
ApeKI GCWGC 3 cut(s) 352, 491, 1034
ApoI RAATTY 3 cut(s) 115, 252, 939
AspLEI GCGC 1 cut(s) 1133
AspS9I GGNCC 8 cut(s) 133, 212, 337, 551, 734, 947, 1154, 1247
AsuHPI GGTGA 2 cut(s) 137, 833
AvaII GGWCC 5 cut(s) 133, 212, 337, 1154, 1247
BaeGI GKGCMC 1 cut(s) 280
BalI TGGCCA 2 cut(s) 180, 618
BanI GGYRCC 1 cut(s) 160
BbsI GAAGAC 1 cut(s) 416
Bbv12I GWGCWC 2 cut(s) 280, 629
BbvI GCAGC 3 cut(s) 339, 478, 1021
BccI CCATC 2 cut(s) 265, 398
BceAI ACGGC 1 cut(s) 891
BcgI CGANNNNNNTGC 2 cut(s) 766, 800
BciT130I CCWGG 2 cut(s) 165, 798
BclI TGATCA 2 cut(s) 127, 592
BfaI CTAG 3 cut(s) 248, 767, 1007
BfoI RGCGCY 1 cut(s) 1134
BglII AGATCT 1 cut(s) 694
BisI GCNGC 3 cut(s) 353, 492, 1035
BlsI GCNGC 3 cut(s) 354, 493, 1036
Bme1390I CCNGG 2 cut(s) 165, 798
Bme18I GGWCC 5 cut(s) 133, 212, 337, 1154, 1247
BmgBI CACGTC 1 cut(s) 509
BmgT120I GGNCC 8 cut(s) 133, 212, 337, 551, 734, 947, 1154, 1247
BmiI GGNNCC 1 cut(s) 162
BmrFI CCNGG 2 cut(s) 165, 798
BmsI GCATC 5 cut(s) 514, 589, 991, 1005, 1191
BpiI GAAGAC 1 cut(s) 416
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 2 cut(s) 131, 1182
BpuEI CTTGAG 1 cut(s) 454
BsaWI WCCGGW 1 cut(s) 1192
BsaXI ACNNNNNCTCC 2 cut(s) 1117, 1147
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 857
Bse1I ACTGG 6 cut(s) 374, 466, 542, 665, 1132, 1151
BseAI TCCGGA 1 cut(s) 1192
BseBI CCWGG 2 cut(s) 165, 798
BseGI GGATG 3 cut(s) 388, 604, 1020
BseLI CCNNNNNNNGG 2 cut(s) 334, 857
BseMII CTCAG 3 cut(s) 693, 957, 1103
BseNI ACTGG 6 cut(s) 374, 466, 542, 665, 1132, 1151
BseRI GAGGAG 1 cut(s) 581
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 3 cut(s) 339, 478, 1021
BseYI CCCAGC 1 cut(s) 1171
BsgI GTGCAG 1 cut(s) 615
BshFI GGCC 7 cut(s) 77, 180, 205, 553, 618, 735, 949
BshNI GGYRCC 1 cut(s) 160
BsiHKAI GWGCWC 2 cut(s) 280, 629
BsiSI CCGG 1 cut(s) 1193
BslFI GGGAC 2 cut(s) 519, 1108
BslI CCNNNNNNNGG 2 cut(s) 334, 857
BsmFI GGGAC 2 cut(s) 519, 1108
BsnI GGCC 7 cut(s) 77, 180, 205, 553, 618, 735, 949
Bsp1286I GDGCHC 2 cut(s) 280, 629
Bsp13I TCCGGA 1 cut(s) 1192
Bsp143I GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
BspACI CCGC 2 cut(s) 136, 1169
BspANI GGCC 7 cut(s) 77, 180, 205, 553, 618, 735, 949
BspCNI CTCAG 3 cut(s) 694, 958, 1104
BspEI TCCGGA 1 cut(s) 1192
BspHI TCATGA 1 cut(s) 562
BspLI GGNNCC 1 cut(s) 162
BspPI GGATC 1 cut(s) 1160
BspT107I GGYRCC 1 cut(s) 160
BsrI ACTGG 6 cut(s) 374, 466, 542, 665, 1132, 1151
BssMI GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
Bst2UI CCWGG 2 cut(s) 165, 798
Bst4CI ACNGT 4 cut(s) 200, 212, 365, 1087
Bst6I CTCTTC 2 cut(s) 461, 650
BstC8I GCNNGC 5 cut(s) 75, 182, 610, 1020, 1180
BstDEI CTNAG 4 cut(s) 666, 702, 966, 1112
BstEII GGTNACC 2 cut(s) 194, 369
BstF5I GGATG 3 cut(s) 388, 604, 1020
BstH2I RGCGCY 1 cut(s) 1134
BstHHI GCGC 1 cut(s) 1133
BstKTI GATC 6 cut(s) 130, 595, 697, 772, 982, 1168
BstMBI GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
BstMWI GCNNNNNNNGC 3 cut(s) 10, 324, 624
BstNI CCWGG 2 cut(s) 165, 798
BstNSI RCATGY 2 cut(s) 612, 1022
BstPI GGTNACC 2 cut(s) 194, 369
BstSCI CCNGG 2 cut(s) 163, 796
BstSLI GKGCMC 1 cut(s) 280
BstV1I GCAGC 3 cut(s) 339, 478, 1021
BstV2I GAAGAC 1 cut(s) 416
BstX2I RGATCY 2 cut(s) 694, 1165
BstXI CCANNNNNNTGG 2 cut(s) 1151, 1263
BstYI RGATCY 2 cut(s) 694, 1165
BsuRI GGCC 7 cut(s) 77, 180, 205, 553, 618, 735, 949
BtrI CACGTC 1 cut(s) 509
BtsCI GGATG 3 cut(s) 388, 604, 1020
BtsI GCAGTG 2 cut(s) 619, 1268
BtsIMutI CAGTG 6 cut(s) 459, 619, 963, 1092, 1144, 1268
Cac8I GCNNGC 5 cut(s) 75, 182, 610, 1020, 1180
CaiI CAGNNNCTG 1 cut(s) 1037
CciI TCATGA 1 cut(s) 562
CfoI GCGC 1 cut(s) 1133
Cfr13I GGNCC 8 cut(s) 133, 212, 337, 551, 734, 947, 1154, 1247
CsiI ACCWGGT 1 cut(s) 796
Csp6I GTAC 1 cut(s) 260
CviAII CATG 8 cut(s) 286, 563, 609, 649, 653, 773, 1019, 1218
CviQI GTAC 1 cut(s) 260
DdeI CTNAG 4 cut(s) 666, 702, 966, 1112
DpnI GATC 6 cut(s) 129, 594, 696, 771, 981, 1167
DpnII GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
EaeI YGGCCR 2 cut(s) 178, 616
Eam1104I CTCTTC 2 cut(s) 461, 650
EarI CTCTTC 2 cut(s) 461, 650
Eco147I AGGCCT 1 cut(s) 77
Eco47I GGWCC 5 cut(s) 133, 212, 337, 1154, 1247
Eco57I CTGAAG 4 cut(s) 105, 248, 521, 773
Eco91I GGTNACC 2 cut(s) 194, 369
EcoO109I RGGNCCY 1 cut(s) 551
EcoO65I GGTNACC 2 cut(s) 194, 369
EcoRII CCWGG 2 cut(s) 163, 796
EcoT22I ATGCAT 4 cut(s) 604, 610, 654, 1020
FaeI CATG 8 cut(s) 289, 566, 612, 652, 656, 776, 1022, 1221
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FaqI GGGAC 2 cut(s) 519, 1108
FatI CATG 8 cut(s) 285, 562, 608, 648, 652, 772, 1018, 1217
FauNDI CATATG 1 cut(s) 604
FbaI TGATCA 2 cut(s) 127, 592
Fnu4HI GCNGC 3 cut(s) 353, 492, 1035
FokI GGATG 3 cut(s) 395, 611, 1027
Fsp4HI GCNGC 3 cut(s) 353, 492, 1035
FspBI CTAG 3 cut(s) 248, 767, 1007
GlaI GCGC 1 cut(s) 1132
GluI GCNGC 3 cut(s) 353, 492, 1035
GsaI CCCAGC 1 cut(s) 1175
GsuI CTGGAG 2 cut(s) 131, 1182
HaeII RGCGCY 1 cut(s) 1134
HaeIII GGCC 7 cut(s) 77, 180, 205, 553, 618, 735, 949
HapII CCGG 1 cut(s) 1193
HhaI GCGC 1 cut(s) 1133
Hin1II CATG 8 cut(s) 289, 566, 612, 652, 656, 776, 1022, 1221
Hin6I GCGC 1 cut(s) 1131
HinP1I GCGC 1 cut(s) 1131
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 1 cut(s) 835
HpaII CCGG 1 cut(s) 1193
HphI GGTGA 2 cut(s) 137, 833
Hpy166II GTNNAC 4 cut(s) 278, 388, 824, 1090
Hpy188I TCNGA 3 cut(s) 403, 792, 1187
Hpy188III TCNNGA 6 cut(s) 110, 471, 563, 596, 1007, 1193
Hpy8I GTNNAC 4 cut(s) 278, 388, 824, 1090
HpyAV CCTTC 5 cut(s) 244, 496, 702, 901, 1287
HpyCH4III ACNGT 4 cut(s) 200, 212, 365, 1087
HpyCH4IV ACGT 2 cut(s) 508, 558
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 324, 624
HpyF3I CTNAG 4 cut(s) 666, 702, 966, 1112
HpySE526I ACGT 2 cut(s) 508, 558
Hsp92II CATG 8 cut(s) 289, 566, 612, 652, 656, 776, 1022, 1221
HspAI GCGC 1 cut(s) 1131
Kpn2I TCCGGA 1 cut(s) 1192
Ksp22I TGATCA 2 cut(s) 127, 592
Kzo9I GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
LmnI GCTCC 2 cut(s) 61, 1138
Lsp1109I GCAGC 3 cut(s) 339, 478, 1021
LweI GCATC 5 cut(s) 514, 589, 991, 1005, 1191
MabI ACCWGGT 1 cut(s) 796
MaeI CTAG 3 cut(s) 248, 767, 1007
MaeII ACGT 2 cut(s) 508, 558
MaeIII GTNAC 6 cut(s) 94, 194, 290, 369, 928, 961
MalI GATC 6 cut(s) 129, 594, 696, 771, 981, 1167
MboI GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
MboII GAAGA 7 cut(s) 421, 448, 533, 553, 637, 731, 908
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 2 cut(s) 694, 1165
MhlI GDGCHC 2 cut(s) 280, 629
MlsI TGGCCA 2 cut(s) 180, 618
MluNI TGGCCA 2 cut(s) 180, 618
MnlI CCTC 7 cut(s) 342, 373, 427, 464, 559, 562, 1005
Mox20I TGGCCA 2 cut(s) 180, 618
Mph1103I ATGCAT 4 cut(s) 604, 610, 654, 1020
MroI TCCGGA 1 cut(s) 1192
MscI TGGCCA 2 cut(s) 180, 618
MseI TTAA 6 cut(s) 41, 513, 725, 867, 1028, 1285
MslI CAYNNNNRTG 2 cut(s) 363, 607
Msp20I TGGCCA 2 cut(s) 180, 618
MspA1I CMGCKG 3 cut(s) 1034, 1160, 1171
MspI CCGG 1 cut(s) 1193
MspR9I CCNGG 2 cut(s) 165, 798
MunI CAATTG 1 cut(s) 729
MvaI CCWGG 2 cut(s) 165, 798
MwoI GCNNNNNNNGC 3 cut(s) 10, 324, 624
NdeI CATATG 1 cut(s) 604
NdeII GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
NlaIII CATG 8 cut(s) 289, 566, 612, 652, 656, 776, 1022, 1221
NlaIV GGNNCC 1 cut(s) 162
NmuCI GTSAC 1 cut(s) 961
NsiI ATGCAT 4 cut(s) 604, 610, 654, 1020
NspI RCATGY 2 cut(s) 612, 1022
PaeI GCATGC 2 cut(s) 612, 1022
PagI TCATGA 1 cut(s) 562
PceI AGGCCT 1 cut(s) 77
PcsI WCGNNNNNNNCGW 1 cut(s) 1047
PfeI GAWTC 1 cut(s) 835
PkrI GCNGC 3 cut(s) 354, 493, 1036
Psp6I CCWGG 2 cut(s) 163, 796
PspEI GGTNACC 2 cut(s) 194, 369
PspFI CCCAGC 1 cut(s) 1171
PspGI CCWGG 2 cut(s) 163, 796
PspN4I GGNNCC 1 cut(s) 162
PspPI GGNCC 8 cut(s) 133, 212, 337, 551, 734, 947, 1154, 1247
PstNI CAGNNNCTG 1 cut(s) 1037
PsuI RGATCY 2 cut(s) 694, 1165
PvuII CAGCTG 2 cut(s) 1034, 1160
RsaI GTAC 1 cut(s) 261
RsaNI GTAC 1 cut(s) 260
RseI CAYNNNNRTG 2 cut(s) 363, 607
SaqAI TTAA 6 cut(s) 41, 513, 725, 867, 1028, 1285
SatI GCNGC 3 cut(s) 353, 492, 1035
Sau3AI GATC 6 cut(s) 127, 592, 694, 769, 979, 1165
Sau96I GGNCC 8 cut(s) 133, 212, 337, 551, 734, 947, 1154, 1247
ScrFI CCNGG 2 cut(s) 165, 798
SduI GDGCHC 2 cut(s) 280, 629
SexAI ACCWGGT 1 cut(s) 796
SfaNI GCATC 5 cut(s) 514, 589, 991, 1005, 1191
SinI GGWCC 5 cut(s) 133, 212, 337, 1154, 1247
SmiMI CAYNNNNRTG 2 cut(s) 363, 607
SmlI CTYRAG 1 cut(s) 469
SmoI CTYRAG 1 cut(s) 469
SphI GCATGC 2 cut(s) 612, 1022
SseBI AGGCCT 1 cut(s) 77
SsiI CCGC 2 cut(s) 136, 1169
SspMI CTAG 3 cut(s) 248, 767, 1007
StuI AGGCCT 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 163, 796
TaaI ACNGT 4 cut(s) 200, 212, 365, 1087
TaiI ACGT 2 cut(s) 511, 561
TaqII GACCGA 1 cut(s) 1235
TfiI GAWTC 1 cut(s) 835
Tru1I TTAA 6 cut(s) 41, 513, 725, 867, 1028, 1285
Tru9I TTAA 6 cut(s) 41, 513, 725, 867, 1028, 1285
TscAI CASTG 6 cut(s) 466, 619, 970, 1092, 1151, 1268
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 3 cut(s) 352, 491, 1034
Tsp45I GTSAC 1 cut(s) 961
TspDTI ATGAA 7 cut(s) 347, 382, 431, 551, 637, 704, 936
TspRI CASTG 6 cut(s) 466, 619, 970, 1092, 1151, 1268
VneI GTGCAC 1 cut(s) 276
VpaK11BI GGWCC 5 cut(s) 133, 212, 337, 1154, 1247
XapI RAATTY 3 cut(s) 115, 252, 939
XbaI TCTAGA 1 cut(s) 1006
XceI RCATGY 2 cut(s) 612, 1022
XcmI CCANNNNNNNNNTGG 2 cut(s) 188, 1143
XspI CTAG 3 cut(s) 248, 767, 1007
Zsp2I ATGCAT 4 cut(s) 604, 610, 654, 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.