Rh7CG099000

Random slug protein 5-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
7427253 .. 7433805
6553 bp
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UTR
Exon/CDS
Intron
Rh7CG099000.1

Sequence Viewer

Length: 645 bp
ATGTGTAATGTAATTTGTGTGCAGGTAGTGGATGATCTGATGTTAAGAAGGTTCCTACGTGCTCGTGATTTAGATGTAGAGCAGGCATCAGCCATGTTCCTGAAGTACTTGAAATGGAGACAAGCCTTTGTTCCTAATGGTTCAATTTCTACTTCAGAAGTACCAAATCAAATTGCACAGAACAAGCTGTTTCTACAGGGATCAGACAAGAGAGGATGTCCAATAGCAGTTTTGCTAGGTGCTAGACATTTTCAAGTCAAAGGGGGCCTCAAGGAGTTCAAGCGTTATGTAGTCTACGCTTTCGACAAGATATGTGCAAGGATGCCACCAGGACAGGAGAAGTTTATCTTCATCGGTGATCTTGAGGGTTGGGGATATTCAAACAGTGATATCCGAGCATACTTAGGAGCTGTATCCATTTTGCAGGACTACTATCCAGAAAGATTAGGGAAGATGTTCGTTGTCCATGTGCCTTTTGTGTTTATGACAGTTTGGAAAATCATTTGCCCTTTCATTGACAACAAAACTAAGGAGAAGATAGTATTTGTTGAGAACAAAATGCTAAAATCAACTCTGCTTGAAGAGATTGATGAAAGCCAACTTCCTGAAAAATATGGAGGCAAACTGACATTGGTTCCTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

214

Amino Acids

24.56

Weight (kDa)

9.02

Isoelectric Point (pI)

41.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO PF00650 61 - 207 1e-36 CRAL/TRIO domain
CRAL_TRIO_2 PF13716 72 - 209 3.8e-09 Divergent CRAL/TRIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015624)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 13
AccI GTMKAC 1 cut(s) 294
AclWI GGATC 1 cut(s) 208
AcuI CTGAAG 2 cut(s) 122, 138
AfaI GTAC 2 cut(s) 107, 162
AgsI TTSAA 6 cut(s) 112, 144, 254, 280, 381, 581
AjnI CCWGG 1 cut(s) 328
AluBI AGCT 2 cut(s) 187, 410
AluI AGCT 2 cut(s) 187, 410
Alw21I GWGCWC 1 cut(s) 64
Alw26I GTCTC 1 cut(s) 112
AlwI GGATC 1 cut(s) 208
AoxI GGCC 1 cut(s) 265
Asp700I GAANNNNTTC 1 cut(s) 455
AspS9I GGNCC 1 cut(s) 265
AsuHPI GGTGA 1 cut(s) 368
BauI CACGAG 1 cut(s) 63
Bbv12I GWGCWC 1 cut(s) 64
BciT130I CCWGG 1 cut(s) 330
BciVI GTATCC 1 cut(s) 424
BcoDI GTCTC 1 cut(s) 112
BfaI CTAG 2 cut(s) 236, 243
BfmI CTRYAG 1 cut(s) 194
BfuAI ACCTGC 1 cut(s) 13
BfuI GTATCC 1 cut(s) 424
BmcAI AGTACT 1 cut(s) 107
Bme1390I CCNGG 1 cut(s) 330
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 3 cut(s) 53, 266, 636
BmrFI CCNGG 1 cut(s) 330
BmsI GCATC 2 cut(s) 95, 312
BpuEI CTTGAG 2 cut(s) 254, 383
BsaAI YACGTR 1 cut(s) 59
BseBI CCWGG 1 cut(s) 330
BseGI GGATG 3 cut(s) 37, 221, 327
BsgI GTGCAG 1 cut(s) 41
BshFI GGCC 1 cut(s) 267
BsiHKAI GWGCWC 1 cut(s) 64
BsmAI GTCTC 1 cut(s) 112
BsnI GGCC 1 cut(s) 267
Bsp1286I GDGCHC 1 cut(s) 64
Bsp143I GATC 3 cut(s) 34, 200, 358
BspANI GGCC 1 cut(s) 267
BspLI GGNNCC 3 cut(s) 53, 266, 636
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 1 cut(s) 208
BssMI GATC 3 cut(s) 34, 200, 358
BssSI CACGAG 1 cut(s) 63
Bst2BI CACGAG 1 cut(s) 63
Bst2UI CCWGG 1 cut(s) 330
Bst4CI ACNGT 2 cut(s) 386, 490
Bst6I CTCTTC 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 59
BstC8I GCNNGC 1 cut(s) 84
BstDEI CTNAG 2 cut(s) 403, 528
BstF5I GGATG 3 cut(s) 37, 221, 327
BstKTI GATC 3 cut(s) 37, 203, 361
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 3 cut(s) 34, 200, 358
BstNI CCWGG 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 328
BstSFI CTRYAG 1 cut(s) 194
BsuI GTATCC 1 cut(s) 424
BsuRI GGCC 1 cut(s) 267
BtsCI GGATG 3 cut(s) 37, 221, 327
BtsIMutI CAGTG 1 cut(s) 391
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 84
Cfr13I GGNCC 1 cut(s) 265
Csp6I GTAC 2 cut(s) 106, 161
CviAII CATG 2 cut(s) 94, 467
CviJI RGCY 6 cut(s) 92, 125, 187, 267, 410, 597
CviKI_1 RGCY 6 cut(s) 92, 125, 187, 267, 410, 597
CviQI GTAC 2 cut(s) 106, 161
DdeI CTNAG 2 cut(s) 403, 528
DpnI GATC 3 cut(s) 36, 202, 360
DpnII GATC 3 cut(s) 34, 200, 358
Eam1104I CTCTTC 1 cut(s) 576
EarI CTCTTC 1 cut(s) 576
Eco32I GATATC 1 cut(s) 391
Eco57I CTGAAG 2 cut(s) 122, 138
EcoO109I RGGNCCY 1 cut(s) 265
EcoRII CCWGG 1 cut(s) 328
EcoRV GATATC 1 cut(s) 391
FaeI CATG 2 cut(s) 97, 470
FaiI YATR 7 cut(s) 95, 288, 313, 400, 468, 485, 615
FalI AAGNNNNNCTT 2 cut(s) 332, 364
FatI CATG 2 cut(s) 93, 466
FblI GTMKAC 1 cut(s) 294
FokI GGATG 3 cut(s) 44, 228, 334
FspBI CTAG 2 cut(s) 236, 243
HaeIII GGCC 1 cut(s) 267
Hin1II CATG 2 cut(s) 97, 470
HphI GGTGA 1 cut(s) 368
Hpy166II GTNNAC 1 cut(s) 295
Hpy188I TCNGA 4 cut(s) 39, 157, 205, 395
Hpy188III TCNNGA 5 cut(s) 65, 100, 362, 437, 605
Hpy8I GTNNAC 1 cut(s) 295
HpyAV CCTTC 1 cut(s) 42
HpyCH4III ACNGT 2 cut(s) 386, 490
HpyCH4IV ACGT 1 cut(s) 58
HpyCH4V TGCA 4 cut(s) 22, 176, 317, 424
HpyF3I CTNAG 2 cut(s) 403, 528
HpySE526I ACGT 1 cut(s) 58
Hsp92II CATG 2 cut(s) 97, 470
Kzo9I GATC 3 cut(s) 34, 200, 358
LmnI GCTCC 1 cut(s) 407
LweI GCATC 2 cut(s) 95, 312
MaeI CTAG 2 cut(s) 236, 243
MaeII ACGT 1 cut(s) 58
MalI GATC 3 cut(s) 36, 202, 360
MboI GATC 3 cut(s) 34, 200, 358
MboII GAAGA 4 cut(s) 340, 463, 547, 593
MhlI GDGCHC 1 cut(s) 64
MluCI AATT 3 cut(s) 12, 144, 171
MnlI CCTC 4 cut(s) 206, 278, 358, 611
MroXI GAANNNNTTC 1 cut(s) 455
MseI TTAA 1 cut(s) 44
MspR9I CCNGG 1 cut(s) 330
MvaI CCWGG 1 cut(s) 330
NdeII GATC 3 cut(s) 34, 200, 358
NlaIII CATG 2 cut(s) 97, 470
NlaIV GGNNCC 3 cut(s) 53, 266, 636
PdmI GAANNNNTTC 1 cut(s) 455
Ppu21I YACGTR 1 cut(s) 59
Psp6I CCWGG 1 cut(s) 328
PspGI CCWGG 1 cut(s) 328
PspN4I GGNNCC 3 cut(s) 53, 266, 636
PspPI GGNCC 1 cut(s) 265
RsaI GTAC 2 cut(s) 107, 162
RsaNI GTAC 2 cut(s) 106, 161
SaqAI TTAA 1 cut(s) 44
Sau3AI GATC 3 cut(s) 34, 200, 358
Sau96I GGNCC 1 cut(s) 265
ScaI AGTACT 1 cut(s) 107
ScrFI CCNGG 1 cut(s) 330
SduI GDGCHC 1 cut(s) 64
SetI ASST 6 cut(s) 27, 53, 61, 189, 241, 412
SfaNI GCATC 2 cut(s) 95, 312
SfcI CTRYAG 1 cut(s) 194
SmlI CTYRAG 2 cut(s) 269, 362
SmoI CTYRAG 2 cut(s) 269, 362
Sse9I AATT 3 cut(s) 12, 144, 171
SspMI CTAG 2 cut(s) 236, 243
StyD4I CCNGG 1 cut(s) 328
TaaI ACNGT 2 cut(s) 386, 490
TaiI ACGT 1 cut(s) 61
TaqI TCGA 1 cut(s) 303
TasI AATT 3 cut(s) 12, 144, 171
TatI WGTACW 1 cut(s) 105
Tru1I TTAA 1 cut(s) 44
Tru9I TTAA 1 cut(s) 44
TscAI CASTG 1 cut(s) 391
TspDTI ATGAA 3 cut(s) 340, 502, 606
TspRI CASTG 1 cut(s) 391
XmiI GTMKAC 1 cut(s) 294
XmnI GAANNNNTTC 1 cut(s) 455
XspI CTAG 2 cut(s) 236, 243
ZrmI AGTACT 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.