Rh7CG141700

mitogen-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0017483
Physical Location & Seq
Reverse (-)
11505383 .. 11518458
13076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG141700.1

Sequence Viewer

Length: 384 bp
ATGAAAAGGCTTCCTTTACCTTTTGCTATTGAGAATCATTCCTTCATCTGTTGCTGTGTTGCTGATCCATTGTCAAACATGTACTCCTTTGGCCAAACCATTCTGGATGGGATCAAGAGTGTGGATGCAGAGTCTGAATTCTTCACAGAATATGGAAAGGCAAGCAAGTACAAATTTCAGGAGGTCATTGGCAAAGGAAGTTATGGTGTTGTGGGTTCTGCGGTTGACACCCACACCGGAGAAAAAGTTGCGATCAAGAAGATTAATGGTGTCTTTGAGAAGGTCTTAGATGCTACAAGGATCCTGAGAGAAATCAAGCTTCTTCATCTGCTTCATCATCCTGATATTGTTGAAATAAATCACATTATGCTTCCTTCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

127

Amino Acids

14.14

Weight (kDa)

6.58

Isoelectric Point (pI)

25.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 57 - 123 1.5e-12 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 221
AclWI GGATC 4 cut(s) 59, 119, 295, 308
AcoI YGGCCR 1 cut(s) 91
AcsI RAATTY 2 cut(s) 137, 173
AfaI GTAC 2 cut(s) 83, 170
AflIII ACRYGT 1 cut(s) 78
AgsI TTSAA 1 cut(s) 353
AluBI AGCT 1 cut(s) 319
AluI AGCT 1 cut(s) 319
AlwI GGATC 4 cut(s) 59, 119, 295, 308
AlwNI CAGNNNCTG 1 cut(s) 134
AoxI GGCC 1 cut(s) 91
ApoI RAATTY 2 cut(s) 137, 173
AseI ATTAAT 1 cut(s) 264
BalI TGGCCA 1 cut(s) 93
BamHI GGATCC 1 cut(s) 300
BccI CCATC 1 cut(s) 101
BmiI GGNNCC 1 cut(s) 302
BmsI GCATC 2 cut(s) 115, 280
BsaWI WCCGGW 1 cut(s) 236
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 231, 261
BseGI GGATG 3 cut(s) 112, 130, 337
BseMII CTCAG 1 cut(s) 296
BshFI GGCC 1 cut(s) 93
BsiSI CCGG 1 cut(s) 237
BsnI GGCC 1 cut(s) 93
Bsp143I GATC 4 cut(s) 64, 111, 252, 300
BspACI CCGC 1 cut(s) 221
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 297
BspHI TCATGA 1 cut(s) 380
BspLI GGNNCC 1 cut(s) 302
BspPI GGATC 4 cut(s) 59, 119, 295, 308
BssMI GATC 4 cut(s) 64, 111, 252, 300
BstC8I GCNNGC 1 cut(s) 163
BstDEI CTNAG 2 cut(s) 286, 305
BstF5I GGATG 3 cut(s) 112, 130, 337
BstKTI GATC 4 cut(s) 67, 114, 255, 303
BstMBI GATC 4 cut(s) 64, 111, 252, 300
BstNSI RCATGY 1 cut(s) 82
BstX2I RGATCY 1 cut(s) 300
BstYI RGATCY 1 cut(s) 300
BsuRI GGCC 1 cut(s) 93
BtsCI GGATG 3 cut(s) 112, 130, 337
Cac8I GCNNGC 1 cut(s) 163
CaiI CAGNNNCTG 1 cut(s) 134
CciI TCATGA 1 cut(s) 380
Csp6I GTAC 2 cut(s) 82, 169
CviAII CATG 2 cut(s) 79, 381
CviJI RGCY 3 cut(s) 10, 93, 319
CviKI_1 RGCY 3 cut(s) 10, 93, 319
CviQI GTAC 2 cut(s) 82, 169
DdeI CTNAG 2 cut(s) 286, 305
DpnI GATC 4 cut(s) 66, 113, 254, 302
DpnII GATC 4 cut(s) 64, 111, 252, 300
EaeI YGGCCR 1 cut(s) 91
EcoRI GAATTC 1 cut(s) 137
FaeI CATG 2 cut(s) 82, 384
FaiI YATR 5 cut(s) 80, 153, 204, 368, 382
FalI AAGNNNNNCTT 1 cut(s) 30
FatI CATG 2 cut(s) 78, 380
FokI GGATG 3 cut(s) 119, 137, 324
HaeIII GGCC 1 cut(s) 93
HapII CCGG 1 cut(s) 237
Hin1II CATG 2 cut(s) 82, 384
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HindIII AAGCTT 1 cut(s) 317
HinfI GANTC 2 cut(s) 34, 131
HpaII CCGG 1 cut(s) 237
Hpy166II GTNNAC 1 cut(s) 226
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 7 cut(s) 104, 115, 179, 256, 304, 341, 381
Hpy8I GTNNAC 1 cut(s) 226
HpyAV CCTTC 3 cut(s) 52, 274, 384
HpyCH4V TGCA 1 cut(s) 128
HpyF3I CTNAG 2 cut(s) 286, 305
Hsp92II CATG 2 cut(s) 82, 384
Kzo9I GATC 4 cut(s) 64, 111, 252, 300
LpnPI CCDG 5 cut(s) 89, 164, 250, 317, 354
LweI GCATC 2 cut(s) 115, 280
MalI GATC 4 cut(s) 66, 113, 254, 302
MboI GATC 4 cut(s) 64, 111, 252, 300
MboII GAAGA 4 cut(s) 133, 271, 314, 369
MflI RGATCY 1 cut(s) 300
MlsI TGGCCA 1 cut(s) 93
MluCI AATT 2 cut(s) 137, 173
MluNI TGGCCA 1 cut(s) 93
MlyI GAGTC 1 cut(s) 140
MnlI CCTC 1 cut(s) 175
Mox20I TGGCCA 1 cut(s) 93
MscI TGGCCA 1 cut(s) 93
MseI TTAA 1 cut(s) 264
Msp20I TGGCCA 1 cut(s) 93
MspI CCGG 1 cut(s) 237
NdeII GATC 4 cut(s) 64, 111, 252, 300
NlaIII CATG 2 cut(s) 82, 384
NlaIV GGNNCC 1 cut(s) 302
NspI RCATGY 1 cut(s) 82
PagI TCATGA 1 cut(s) 380
PciI ACATGT 1 cut(s) 78
PfeI GAWTC 1 cut(s) 34
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
PscI ACATGT 1 cut(s) 78
PshBI ATTAAT 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 302
PstNI CAGNNNCTG 1 cut(s) 134
PsuI RGATCY 1 cut(s) 300
RsaI GTAC 2 cut(s) 83, 170
RsaNI GTAC 2 cut(s) 82, 169
SaqAI TTAA 1 cut(s) 264
Sau3AI GATC 4 cut(s) 64, 111, 252, 300
SchI GAGTC 1 cut(s) 140
SetI ASST 4 cut(s) 22, 186, 285, 321
SfaNI GCATC 2 cut(s) 115, 280
Sse9I AATT 2 cut(s) 137, 173
SsiI CCGC 1 cut(s) 221
TasI AATT 2 cut(s) 137, 173
TatI WGTACW 2 cut(s) 81, 168
TfiI GAWTC 1 cut(s) 34
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TspDTI ATGAA 5 cut(s) 17, 34, 314, 323, 369
VspI ATTAAT 1 cut(s) 264
XapI RAATTY 2 cut(s) 137, 173
XceI RCATGY 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.