Something about silencing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0381301 |
| rosa_roxburghii | Rroxscaffold_4G00321050 |
| rosa_samantha | Rh1AG018300 Rh1CG068000 Rh5AG340500 Rh6AG185800 Rh6BG055900 Rh7CG323100 Rh7CG467900 Rh7DG324000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 266 |
| AcsI | RAATTY | 1 cut(s) | 137 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 266 |
| AgsI | TTSAA | 4 cut(s) | 35, 166, 196, 214 |
| AluBI | AGCT | 3 cut(s) | 50, 176, 273 |
| AluI | AGCT | 3 cut(s) | 50, 176, 273 |
| Alw26I | GTCTC | 2 cut(s) | 31, 93 |
| ApeKI | GCWGC | 1 cut(s) | 176 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| BbvI | GCAGC | 1 cut(s) | 163 |
| BccI | CCATC | 1 cut(s) | 227 |
| BcoDI | GTCTC | 2 cut(s) | 31, 93 |
| BisI | GCNGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 1 cut(s) | 178 |
| BpuEI | CTTGAG | 1 cut(s) | 203 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 266 |
| Bse1I | ACTGG | 1 cut(s) | 70 |
| BseGI | GGATG | 2 cut(s) | 11, 103 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 266 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 70 |
| BseXI | GCAGC | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 266 |
| BsmAI | GTCTC | 2 cut(s) | 31, 93 |
| BspCNI | CTCAG | 1 cut(s) | 84 |
| BsrI | ACTGG | 1 cut(s) | 70 |
| BstDEI | CTNAG | 1 cut(s) | 92 |
| BstF5I | GGATG | 2 cut(s) | 11, 103 |
| BstMAI | GTCTC | 2 cut(s) | 31, 93 |
| BstV1I | GCAGC | 1 cut(s) | 163 |
| BtsCI | GGATG | 2 cut(s) | 11, 103 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviJI | RGCY | 3 cut(s) | 50, 176, 273 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 176, 273 |
| DdeI | CTNAG | 1 cut(s) | 92 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 2 cut(s) | 60, 155 |
| FatI | CATG | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 1 cut(s) | 177 |
| FokI | GGATG | 2 cut(s) | 18, 110 |
| Fsp4HI | GCNGC | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 177 |
| Hin1II | CATG | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 3 cut(s) | 93, 129, 255 |
| HpyAV | CCTTC | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 92 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| LpnPI | CCDG | 2 cut(s) | 83, 257 |
| Lsp1109I | GCAGC | 1 cut(s) | 163 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MluCI | AATT | 3 cut(s) | 137, 191, 214 |
| MmeI | TCCRAC | 1 cut(s) | 54 |
| MnlI | CCTC | 2 cut(s) | 87, 178 |
| MseI | TTAA | 1 cut(s) | 263 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| NlaIII | CATG | 1 cut(s) | 157 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 266 |
| PkrI | GCNGC | 1 cut(s) | 178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 263 |
| SatI | GCNGC | 1 cut(s) | 177 |
| SetI | ASST | 4 cut(s) | 52, 127, 178, 275 |
| SgeI | CNNG | 8 cut(s) | 35, 44, 82, 123, 166, 194, 240, 256 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| Sse9I | AATT | 3 cut(s) | 137, 191, 214 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TasI | AATT | 3 cut(s) | 137, 191, 214 |
| Tru1I | TTAA | 1 cut(s) | 263 |
| Tru9I | TTAA | 1 cut(s) | 263 |
| TseI | GCWGC | 1 cut(s) | 176 |
| TspDTI | ATGAA | 3 cut(s) | 117, 150, 170 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 266 |
| XapI | RAATTY | 1 cut(s) | 137 |