SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0409271 |
| rosa_multiflora | Rmu_sc0001616.1_g000038 Rmu_sc0004469.1_g000008 Rmu_sc0037829.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00060930 |
| rosa_samantha | Rh5AG037200 Rh5CG039900 Rh7DG185600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 5 cut(s) | 79, 112, 127, 160, 259 |
| AfaI | GTAC | 1 cut(s) | 93 |
| AjnI | CCWGG | 3 cut(s) | 45, 87, 135 |
| AluBI | AGCT | 2 cut(s) | 7, 280 |
| AluI | AGCT | 2 cut(s) | 7, 280 |
| AlwI | GGATC | 5 cut(s) | 79, 112, 127, 160, 259 |
| AoxI | GGCC | 2 cut(s) | 171, 270 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 225 |
| AspLEI | GCGC | 1 cut(s) | 61 |
| AsuHPI | GGTGA | 1 cut(s) | 250 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BccI | CCATC | 1 cut(s) | 256 |
| BciT130I | CCWGG | 3 cut(s) | 47, 89, 137 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlpI | GCTNAGC | 1 cut(s) | 8 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 3 cut(s) | 47, 89, 137 |
| BmiI | GGNNCC | 1 cut(s) | 36 |
| BmrFI | CCNGG | 3 cut(s) | 47, 89, 137 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 1 cut(s) | 46 |
| BseBI | CCWGG | 3 cut(s) | 47, 89, 137 |
| BseDI | CCNNGG | 1 cut(s) | 46 |
| BseGI | GGATG | 4 cut(s) | 30, 124, 172, 271 |
| BseMII | CTCAG | 1 cut(s) | 147 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BshFI | GGCC | 2 cut(s) | 173, 272 |
| BsnI | GGCC | 2 cut(s) | 173, 272 |
| Bsp143I | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 8 |
| BspANI | GGCC | 2 cut(s) | 173, 272 |
| BspCNI | CTCAG | 1 cut(s) | 148 |
| BspLI | GGNNCC | 1 cut(s) | 36 |
| BspPI | GGATC | 5 cut(s) | 79, 112, 127, 160, 259 |
| BssECI | CCNNGG | 1 cut(s) | 46 |
| BssMI | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| Bst2UI | CCWGG | 3 cut(s) | 47, 89, 137 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| BstDEI | CTNAG | 2 cut(s) | 8, 156 |
| BstF5I | GGATG | 4 cut(s) | 30, 124, 172, 271 |
| BstHHI | GCGC | 1 cut(s) | 61 |
| BstKTI | GATC | 5 cut(s) | 87, 107, 135, 155, 254 |
| BstMBI | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| BstNI | CCWGG | 3 cut(s) | 47, 89, 137 |
| BstSCI | CCNGG | 3 cut(s) | 45, 87, 135 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstX2I | RGATCY | 3 cut(s) | 104, 152, 251 |
| BstYI | RGATCY | 3 cut(s) | 104, 152, 251 |
| BsuRI | GGCC | 2 cut(s) | 173, 272 |
| BtsCI | GGATG | 4 cut(s) | 30, 124, 172, 271 |
| CfoI | GCGC | 1 cut(s) | 61 |
| Csp6I | GTAC | 1 cut(s) | 92 |
| CviJI | RGCY | 6 cut(s) | 7, 45, 173, 201, 272, 280 |
| CviKI_1 | RGCY | 6 cut(s) | 7, 45, 173, 201, 272, 280 |
| CviQI | GTAC | 1 cut(s) | 92 |
| DdeI | CTNAG | 2 cut(s) | 8, 156 |
| DpnI | GATC | 5 cut(s) | 86, 106, 134, 154, 253 |
| DpnII | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| EcoRII | CCWGG | 3 cut(s) | 45, 87, 135 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 4 cut(s) | 37, 131, 179, 278 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 60 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 2 cut(s) | 173, 272 |
| HhaI | GCGC | 1 cut(s) | 61 |
| Hin6I | GCGC | 1 cut(s) | 59 |
| HinP1I | GCGC | 1 cut(s) | 59 |
| HinfI | GANTC | 2 cut(s) | 190, 232 |
| HphI | GGTGA | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 5 cut(s) | 109, 157, 195, 231, 256 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 142 |
| HpyAV | CCTTC | 3 cut(s) | 62, 139, 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 2 cut(s) | 8, 156 |
| HspAI | GCGC | 1 cut(s) | 59 |
| Kzo9I | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| MalI | GATC | 5 cut(s) | 86, 106, 134, 154, 253 |
| MboI | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| MboII | GAAGA | 1 cut(s) | 253 |
| MflI | RGATCY | 3 cut(s) | 104, 152, 251 |
| MmeI | TCCRAC | 1 cut(s) | 82 |
| MnlI | CCTC | 8 cut(s) | 7, 106, 142, 151, 154, 163, 212, 262 |
| MroXI | GAANNNNTTC | 1 cut(s) | 225 |
| MspR9I | CCNGG | 3 cut(s) | 47, 89, 137 |
| MvaI | CCWGG | 3 cut(s) | 47, 89, 137 |
| NdeII | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| NlaIV | GGNNCC | 1 cut(s) | 36 |
| PdmI | GAANNNNTTC | 1 cut(s) | 225 |
| PfeI | GAWTC | 2 cut(s) | 190, 232 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| Psp6I | CCWGG | 3 cut(s) | 45, 87, 135 |
| PspGI | CCWGG | 3 cut(s) | 45, 87, 135 |
| PspN4I | GGNNCC | 1 cut(s) | 36 |
| PsuI | RGATCY | 3 cut(s) | 104, 152, 251 |
| RsaI | GTAC | 1 cut(s) | 93 |
| RsaNI | GTAC | 1 cut(s) | 92 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 5 cut(s) | 84, 104, 132, 152, 251 |
| ScrFI | CCNGG | 3 cut(s) | 47, 89, 137 |
| StyD4I | CCNGG | 3 cut(s) | 45, 87, 135 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TaqI | TCGA | 1 cut(s) | 83 |
| TfiI | GAWTC | 2 cut(s) | 190, 232 |
| TseI | GCWGC | 1 cut(s) | 4 |
| TspDTI | ATGAA | 1 cut(s) | 135 |
| XmnI | GAANNNNTTC | 1 cut(s) | 225 |