Rw0G005040

Belongs to the glycosyltransferase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00196
OG0011248
Physical Location & Seq
Forward (+)
18770 .. 24466
5697 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G005040.1

Sequence Viewer

Length: 2973 bp
ATGGCGGGAAATGAGTGGATCAATGGCTACTTGGAGGCGATACTTGACACCGGGGCGACGGCGATCGAGGAGCAGAAGCCGACGCCGGTGAATCTGAGAGAGGGAGGACATTTTAATCCGACTAAGTATTTTGTGGAGGAGGTGGTTACTGGTGTGGATGAGTCGGATTTGTACCGGACGTGGATCAAGGTGGTTGCTACCCGCAACACACGAGAGCGCAGCTCCAGGCTCGAGAACATGTGCTGGCGCATTTGGCATCTTACCCGTAAGAAGAAACAGTTGGAGTGGGAGGAGCTTCAACGGTCGGCAAACCGCAGATGGGAGCGGGAACAAGGACGGAGGGATGCAACCGAAGACATGTCAGAAGACTTGTCCGAAGGAGAGAAGGGTGATACTTTGGCGGAGATGCTGCTATGTGAGACTCCAAGAAGAAAGTTCCAGCGAATGGTTTCTAATTTGGAAGTATGGTCAGATGATAAAAAGGAAAAGAAACTATATGTCGTTCTGATCAGTTTGCATGGTTTAGTCCGGGGAGAAAACATGGAGCTTGGTCGAGACTCGGATACAGGTGGACAGGTCAAATATGTGGTAGAGCTTGCCAGAGCACTCGCAAGGATGCCTGGGGTTTATAGGGTAGATCTCTTTACTCGCCAAGTGTCATCTCCTGAGGTTGATTGGAGCTATGGTGAACCAACAGAGATGATAACTGCAGGTCCTGAAGATGGTGATGGTGATCTAGGAGAAAGCAGCGGAGCATATATAATCAGAATTCCTTTTGGTCCTCGCGACCAATACCTCACTCAAGGCCAGCCTGTCTGGCCATATGTAATTCATGGCCACTATGCAGATGCAGGGGATAGTGCTGCTCTTCTTTCTGGTGCTTTGAATGTCCCAATGGTTCTAACAGGACACTCACTTGGAAGAAACAAGCTTGAACAGCTTATTAAGCAGGGACGACAATCAAAGGAAGACATTAATTCAACATATAAGATTATGAGAAGGATAGAGGCGGAAGAGCTTTCCCTTGATGCTGCAGAACTTGTTATTACAAGTACAAAACAAGAAATCGAAGAGCAATGGGGACTTTATGATGGGTTTGATGTCAAACTTGAGAAAGTTTTGCGTGCCCGGGCTAGAAGAGGAGTAAATTGCCATGGTCGTTACATGCCAAGGATGGTGCTTATTGGTGGTACCAGTGATGGGTCTTCTTCCCCGAAAGCAATACCAACAATATGGTCAAATGAGTGTTTTATTCCTTACAAATCCTCACAAGCCAATGACTTGGCTCTGTCACGGCCAGATCCAAAGAAGAACATAACCACTCTTTTGAAAGCCTTTGGAGAATGCCGTCCTCTAAGAGAACTTGCTAACCTTGGACTACATAGACGAAATGTCTACCGGAAATGCAAGTGTGCTTACTACAGTGTGAAAATGATTGATAAGTATGATCTTTATGGGCAAGTGGCCTATCCAAAGCATCACAAGCAATCAGATGTTCCAGATATTTACCGGCTTGCAGCAAAAACAAAGGGAGTTTTCATAAATCCAGCATTAGTGGAGCCTTTTGGGCTAACCTTGATTGAGGCAGCAGCACACGGGCTTCCGATGGTGGCTACAAAAAATGGTGGACCGGTTGACATACATCGGGCGCTTAGTAATGGTTTGCTTGTGGACCCTCATGATCAGCAATCAATTGCTAATGCACTGCTGAAGTTGTTATCGGAAAAGAATTTATGGGTTGACTGCAGAAAGAATGGTTGGAAAAACATACACCTTTTCTCATGGCCTGAACACTGCCGAACCTACTTGACTAGAGTAGCAGCCTGCCGCATGAGACATCCACAGTGGCAGACTGACACCCCGGAGGATGAAATGGCTGCTGAAGAGTCCCTCAATGATTCTCTTAAGGACGTGCAAGATATGTCTCTTAGGCTCTCAGTTGATGGGGACAAATCCTCACTGAATGAATCTCTTGATGTGACTGCTGCTTCTGGTGACCATGAGGTGCAAGATCAAGTGAAGCGTCCTAAGCAAGATCAAGAAACCAATTCTGGTCCAAAAGACCATGAAGAAGGAAATAAGCTGCCGGATAATGTAGCAAGCAAATATCCCTTGTTAAGACGTAGAAGAAAATTGATTGTCATAGCACTCGATTGCTATGACAAATCTGGGGCTCCTGAAAAGAAAATGATTCAAATTGTGCAAGAAATATTCAAGGCTGTAAGACTAGATTCTCAAAGTGCAAGATTTACAGGGTTTGCTCTGCTAACAGCTATGCCAGCATCAGAAACATTTGATGCGTTGGTTTGTAGCAGTGGAAGTGAGGTTTACTACTACCTGGTACTTATACAGAAGAAGATGGAAGACTTTTCCCAGATCCAGATTATTCGTCTCACATTGACTACCGATGGTGAAGGATTAAAGAAAACCATTTGGAAGCTCTTAAATGGCCCTGATGGTGAACGGAATTCCACATCTTCAAGCCACATTGAAGAAGATATAAAATCAAGCAGTGCCCATTGCATTTCATACTTGATCAAGGATCCTAGTAAGGCAAGGAAAGTTGATGATTTAAGACAGAAACTCAGGATGCGGGGACTACGCTGCCATCCAATGTACTGCAGGAGCTCAACGCGAATGCAAATTGTTCCTCTCCTTGCTTCTCGAGCACAGGCTCTCAGGTACCTTTTCGTACGCTGGAGATTGAATGTTGCAAACATGTATGTGTTCCTTGGAGAAAGTGGAGACACTGATTATGAAGAAATGATAGCAGGGACTCACAAGACCATAATCATGAAAGGGGTGGTGGGAAAGGGTTCTGAAGAGCTGCTAAGAACATCAGGAAGCTATCTGAGAGACGACATTGTTCCTCCTCAGAGCCCACTGGTCGCCATTGTAAATGGGCAAGCTCCAACAGCTGATGAGATTGCCACTGCTCTGAAGCAGGTCACCAAATCTGCTGCCGGAATGTGA

Protein Analysis

990

Amino Acids

111.66

Weight (kDa)

7.55

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_4 PF13439 190 - 319 6.9e-06 Glycosyltransferase Family 4
Glyco_trans_4_4 PF13579 190 - 357 9.1e-06 Glycosyl transferase 4-like domain
Glycos_transf_1 PF00534 430 - 586 3.1e-20 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 436 - 574 9.2e-14 Glycosyl transferases group 1
S6PP PF05116 836 - 944 2.1e-10 Sucrose-6F-phosphate phosphohydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011248)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04920
fragaria_vesca FvH4_4g13520 FvH4_4g13520 FvH4_4g13520
malus_domestica MD04G1013500.v1.1
prunus_persica Prupe.1G159700_v2.0.a1 Prupe.1G159700_v2.0.a1 Prupe.1G159700_v2.0.a1
pyrus_communis pycom04g01050
rosa_chinensis RchiOBHm_Chr4g0414151
rosa_laevigata RLG00000008166
rosa_multiflora Rmu_sc0001063.1_g000015
rosa_roxburghii Rroxscaffold_5G00358160
rosa_rugosa Rorug04G0126600
rosa_samantha Rh4AG184700 Rh4BG184100 Rh4CG196400 Rh4DG180000
rosa_wichuraiana Rw0G005040 Rw4G015730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 701, 2935
Acc65I GGTACC 2 cut(s) 1190, 2682
AccB1I GGYRCC 2 cut(s) 1190, 2682
AccB7I CCANNNNNTGG 1 cut(s) 445
AccBSI CCGCTC 1 cut(s) 325
AccI GTMKAC 1 cut(s) 1395
AccII CGCG 2 cut(s) 786, 2635
AciI CCGC 9 cut(s) 5, 202, 313, 325, 401, 750, 1010, 1828, 2593
AclWI GGATC 6 cut(s) 26, 191, 1295, 2371, 2537, 2550
AcoI YGGCCR 3 cut(s) 818, 835, 1295
AcsI RAATTY 3 cut(s) 768, 1729, 2467
AcuI CTGAAG 5 cut(s) 738, 1730, 1902, 2841, 2960
AcyI GRCGYC 1 cut(s) 83
AfaI GTAC 7 cut(s) 173, 1054, 1192, 2343, 2618, 2684, 2694
AfiI CCNNNNNNNGG 4 cut(s) 319, 445, 722, 1200
AflII CTTAAG 1 cut(s) 1904
AflIII ACRYGT 3 cut(s) 237, 357, 2718
AgeI ACCGGT 1 cut(s) 1630
AhdI GACNNNNNGTC 1 cut(s) 1391
AjiI CACGTC 2 cut(s) 180, 1912
AjnI CCWGG 3 cut(s) 224, 619, 2337
AjuI GAANNNNNNNTTGG 4 cut(s) 263, 295, 1741, 1773
Alw21I GWGCWC 3 cut(s) 607, 2630, 2671
Alw26I GTCTC 7 cut(s) 413, 549, 1828, 1929, 2396, 2739, 2850
AlwI GGATC 6 cut(s) 26, 191, 1295, 2371, 2537, 2550
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 3 cut(s) 230, 1128, 2664
AoxI GGCC 7 cut(s) 805, 818, 835, 1295, 1464, 1784, 2449
ApoI RAATTY 3 cut(s) 768, 1729, 2467
AseI ATTAAT 1 cut(s) 975
AsiGI ACCGGT 1 cut(s) 1630
Asp700I GAANNNNTTC 2 cut(s) 448, 2815
Asp718I GGTACC 2 cut(s) 1190, 2682
AspLEI GCGC 3 cut(s) 219, 249, 1651
AspS9I GGNCC 6 cut(s) 713, 779, 1628, 1672, 2054, 2450
AsuC2I CCSGG 5 cut(s) 52, 530, 1129, 1130, 1862
AsuHPI GGTGA 9 cut(s) 100, 401, 698, 737, 743, 2006, 2423, 2471, 2941
AvaI CYCGRG 3 cut(s) 230, 1128, 2664
AvaII GGWCC 5 cut(s) 713, 779, 1628, 1672, 2054
AxyI CCTNAGG 1 cut(s) 666
BaeGI GKGCMC 2 cut(s) 1129, 2518
BalI TGGCCA 2 cut(s) 820, 837
BamHI GGATCC 1 cut(s) 2542
BanI GGYRCC 2 cut(s) 1190, 2682
BanII GRGCYC 3 cut(s) 2176, 2630, 2882
BauI CACGAG 1 cut(s) 210
BbsI GAAGAC 5 cut(s) 360, 372, 975, 1197, 2370
Bbv12I GWGCWC 3 cut(s) 607, 2630, 2671
BceAI ACGGC 3 cut(s) 75, 1310, 1332
BciT130I CCWGG 3 cut(s) 226, 621, 2339
BciVI GTATCC 1 cut(s) 556
BclI TGATCA 3 cut(s) 507, 1681, 2535
BcnI CCSGG 5 cut(s) 52, 530, 1129, 1130, 1862
BcoDI GTCTC 7 cut(s) 413, 549, 1828, 1929, 2396, 2739, 2850
BfaI CTAG 5 cut(s) 737, 1134, 1812, 2228, 2547
BfmI CTRYAG 5 cut(s) 708, 1032, 1420, 1744, 2620
BfoI RGCGCY 1 cut(s) 1652
BfrI CTTAAG 1 cut(s) 1904
BfuAI ACCTGC 2 cut(s) 701, 2935
BfuI GTATCC 1 cut(s) 556
BglI GCCNNNNNGGC 2 cut(s) 817, 1567
BglII AGATCT 1 cut(s) 637
Bme1390I CCNGG 8 cut(s) 52, 226, 530, 621, 1129, 1130, 1862, 2339
Bme18I GGWCC 5 cut(s) 713, 779, 1628, 1672, 2054
BmeRI GACNNNNNGTC 1 cut(s) 1391
BmeT110I CYCGRG 3 cut(s) 230, 1128, 2664
BmgBI CACGTC 2 cut(s) 180, 1912
BmgT120I GGNCC 6 cut(s) 713, 779, 1628, 1672, 2054, 2450
BmiI GGNNCC 6 cut(s) 1192, 1560, 1674, 2175, 2544, 2684
BmrFI CCNGG 8 cut(s) 52, 226, 530, 621, 1129, 1130, 1862, 2339
BpiI GAAGAC 5 cut(s) 360, 372, 975, 1197, 2370
BplI GAGNNNNNCTC 2 cut(s) 206, 238
BpmI CTGGAG 2 cut(s) 208, 2719
Bpu10I CCTNAGC 1 cut(s) 2028
BpuEI CTTGAG 2 cut(s) 786, 1130
BpuMI CCSGG 5 cut(s) 52, 530, 1129, 1130, 1862
BsaBI GATNNNNATC 1 cut(s) 732
BsaHI GRCGYC 1 cut(s) 83
BsaJI CCNNGG 9 cut(s) 51, 529, 620, 1128, 1153, 1169, 1372, 1860, 2731
BsaWI WCCGGW 3 cut(s) 174, 1398, 1630
BsaXI ACNNNNNCTCC 2 cut(s) 670, 700
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 445, 722, 1200
Bse118I RCCGGY 3 cut(s) 85, 1509, 1630
Bse1I ACTGG 3 cut(s) 154, 1194, 2889
Bse21I CCTNAGG 1 cut(s) 666
Bse3DI GCAATG 2 cut(s) 1082, 2518
Bse8I GATNNNNATC 1 cut(s) 732
BseBI CCWGG 3 cut(s) 226, 621, 2339
BseDI CCNNGG 9 cut(s) 51, 529, 620, 1128, 1153, 1169, 1372, 1860, 2731
BseGI GGATG 8 cut(s) 163, 349, 621, 1179, 1837, 1873, 2595, 2608
BseJI GATNNNNATC 1 cut(s) 732
BseLI CCNNNNNNNGG 4 cut(s) 319, 445, 722, 1200
BseMI GCAATG 2 cut(s) 1082, 2518
BseMII CTCAG 7 cut(s) 86, 657, 1950, 2599, 2692, 2843, 2888
BseNI ACTGG 3 cut(s) 154, 1194, 2889
BseRI GAGGAG 5 cut(s) 83, 152, 305, 1155, 2862
BseSI GKGCMC 2 cut(s) 1129, 2518
Bsh1236I CGCG 2 cut(s) 786, 2635
Bsh1285I CGRYCG 2 cut(s) 66, 305
BshFI GGCC 7 cut(s) 807, 820, 837, 1297, 1466, 1786, 2451
BshNI GGYRCC 2 cut(s) 1190, 2682
BshTI ACCGGT 1 cut(s) 1630
BsiEI CGRYCG 2 cut(s) 66, 305
BsiHKAI GWGCWC 3 cut(s) 607, 2630, 2671
BsiHKCI CYCGRG 3 cut(s) 230, 1128, 2664
BsiWI CGTACG 1 cut(s) 2692
BslFI GGGAC 7 cut(s) 875, 966, 1095, 1873, 1961, 2610, 2788
BslI CCNNNNNNNGG 4 cut(s) 319, 445, 722, 1200
BsmAI GTCTC 7 cut(s) 413, 549, 1828, 1929, 2396, 2739, 2850
BsmBI CGTCTC 2 cut(s) 2396, 2850
BsmFI GGGAC 7 cut(s) 875, 966, 1095, 1873, 1961, 2610, 2788
BsmI GAATGC 2 cut(s) 1349, 2643
BsnI GGCC 7 cut(s) 807, 820, 837, 1297, 1466, 1786, 2451
BsoBI CYCGRG 3 cut(s) 230, 1128, 2664
Bsp1286I GDGCHC 7 cut(s) 607, 1129, 2176, 2518, 2630, 2671, 2882
Bsp19I CCATGG 1 cut(s) 1153
Bsp68I TCGCGA 1 cut(s) 786
BspACI CCGC 9 cut(s) 5, 202, 313, 325, 401, 750, 1010, 1828, 2593
BspANI GGCC 7 cut(s) 807, 820, 837, 1297, 1466, 1786, 2451
BspCNI CTCAG 7 cut(s) 87, 658, 1949, 2598, 2691, 2844, 2887
BspFNI CGCG 2 cut(s) 786, 2635
BspHI TCATGA 2 cut(s) 1678, 2793
BspLI GGNNCC 6 cut(s) 1192, 1560, 1674, 2175, 2544, 2684
BspMAI CTGCAG 4 cut(s) 712, 1036, 1748, 2624
BspMI ACCTGC 2 cut(s) 701, 2935
BspPI GGATC 6 cut(s) 26, 191, 1295, 2371, 2537, 2550
BspQI GCTCTTC 4 cut(s) 873, 1008, 1065, 2817
BspT107I GGYRCC 2 cut(s) 1190, 2682
BspTI CTTAAG 1 cut(s) 1904
BsrBI CCGCTC 1 cut(s) 325
BsrDI GCAATG 2 cut(s) 1082, 2518
BsrFI RCCGGY 3 cut(s) 85, 1509, 1630
BsrI ACTGG 3 cut(s) 154, 1194, 2889
BssAI RCCGGY 3 cut(s) 85, 1509, 1630
BssECI CCNNGG 9 cut(s) 51, 529, 620, 1128, 1153, 1169, 1372, 1860, 2731
BssNI GRCGYC 1 cut(s) 83
BssSI CACGAG 1 cut(s) 210
BssT1I CCWWGG 4 cut(s) 1153, 1169, 1372, 2731
Bst2BI CACGAG 1 cut(s) 210
Bst2UI CCWGG 3 cut(s) 226, 621, 2339
Bst4CI ACNGT 4 cut(s) 279, 303, 1424, 1845
Bst6I CTCTTC 6 cut(s) 873, 1008, 1065, 1132, 1878, 2817
BstACI GRCGYC 1 cut(s) 83
BstAFI CTTAAG 1 cut(s) 1904
BstC8I GCNNGC 9 cut(s) 245, 597, 809, 1125, 1515, 1825, 2101, 2280, 2907
BstDSI CCRYGG 1 cut(s) 1153
BstEII GGTNACC 2 cut(s) 1994, 2947
BstF5I GGATG 8 cut(s) 163, 349, 621, 1179, 1837, 1873, 2595, 2608
BstFNI CGCG 2 cut(s) 786, 2635
BstH2I RGCGCY 1 cut(s) 1652
BstHHI GCGC 3 cut(s) 219, 249, 1651
BstMAI GTCTC 7 cut(s) 413, 549, 1828, 1929, 2396, 2739, 2850
BstMCI CGRYCG 2 cut(s) 66, 305
BstNI CCWGG 3 cut(s) 226, 621, 2339
BstNSI RCATGY 4 cut(s) 241, 361, 1168, 2722
BstPI GGTNACC 2 cut(s) 1994, 2947
BstSCI CCNGG 8 cut(s) 50, 224, 528, 619, 1127, 1128, 1860, 2337
BstSFI CTRYAG 5 cut(s) 708, 1032, 1420, 1744, 2620
BstSLI GKGCMC 2 cut(s) 1129, 2518
BstUI CGCG 2 cut(s) 786, 2635
BstV2I GAAGAC 5 cut(s) 360, 372, 975, 1197, 2370
BstX2I RGATCY 4 cut(s) 637, 1300, 2376, 2542
BstXI CCANNNNNNTGG 2 cut(s) 1233, 1282
BstYI RGATCY 4 cut(s) 637, 1300, 2376, 2542
Bsu36I CCTNAGG 1 cut(s) 666
BsuI GTATCC 1 cut(s) 556
BsuRI GGCC 7 cut(s) 807, 820, 837, 1297, 1466, 1786, 2451
BtgI CCRYGG 1 cut(s) 1153
BtrI CACGTC 2 cut(s) 180, 1912
BtsCI GGATG 8 cut(s) 163, 349, 621, 1179, 1837, 1873, 2595, 2608
BtsI GCAGTG 5 cut(s) 1703, 1792, 2320, 2518, 2931
BtuMI TCGCGA 1 cut(s) 786
BveI ACCTGC 2 cut(s) 701, 2935
Cac8I GCNNGC 9 cut(s) 245, 597, 809, 1125, 1515, 1825, 2101, 2280, 2907
CaiI CAGNNNCTG 1 cut(s) 716
CciI TCATGA 2 cut(s) 1678, 2793
CfoI GCGC 3 cut(s) 219, 249, 1651
Cfr10I RCCGGY 3 cut(s) 85, 1509, 1630
Cfr13I GGNCC 6 cut(s) 713, 779, 1628, 1672, 2054, 2450
Cfr9I CCCGGG 1 cut(s) 1128
CseI GACGC 2 cut(s) 91, 2012
CsiI ACCWGGT 1 cut(s) 2337
Csp6I GTAC 7 cut(s) 172, 1053, 1191, 2342, 2617, 2683, 2693
CspAI ACCGGT 1 cut(s) 1630
CviQI GTAC 7 cut(s) 172, 1053, 1191, 2342, 2617, 2683, 2693
DriI GACNNNNNGTC 1 cut(s) 1391
EaeI YGGCCR 3 cut(s) 818, 835, 1295
Eam1104I CTCTTC 6 cut(s) 873, 1008, 1065, 1132, 1878, 2817
Eam1105I GACNNNNNGTC 1 cut(s) 1391
EarI CTCTTC 6 cut(s) 873, 1008, 1065, 1132, 1878, 2817
EciI GGCGGA 2 cut(s) 416, 1025
Ecl136II GAGCTC 1 cut(s) 2628
Eco130I CCWWGG 4 cut(s) 1153, 1169, 1372, 2731
Eco24I GRGCYC 3 cut(s) 2176, 2630, 2882
Eco47I GGWCC 5 cut(s) 713, 779, 1628, 1672, 2054
Eco53kI GAGCTC 1 cut(s) 2628
Eco57I CTGAAG 5 cut(s) 738, 1730, 1902, 2841, 2960
Eco81I CCTNAGG 1 cut(s) 666
Eco88I CYCGRG 3 cut(s) 230, 1128, 2664
Eco91I GGTNACC 2 cut(s) 1994, 2947
EcoICRI GAGCTC 1 cut(s) 2628
EcoO109I RGGNCCY 1 cut(s) 713
EcoO65I GGTNACC 2 cut(s) 1994, 2947
EcoRI GAATTC 2 cut(s) 768, 2467
EcoRII CCWGG 3 cut(s) 224, 619, 2337
EcoT14I CCWWGG 4 cut(s) 1153, 1169, 1372, 2731
EcoT38I GRGCYC 3 cut(s) 2176, 2630, 2882
ErhI CCWWGG 4 cut(s) 1153, 1169, 1372, 2731
Esp3I CGTCTC 2 cut(s) 2396, 2850
FaqI GGGAC 7 cut(s) 875, 966, 1095, 1873, 1961, 2610, 2788
FauI CCCGC 3 cut(s) 209, 318, 2586
FauNDI CATATG 1 cut(s) 823
FbaI TGATCA 3 cut(s) 507, 1681, 2535
FblI GTMKAC 1 cut(s) 1395
FokI GGATG 8 cut(s) 170, 356, 628, 1186, 1824, 1880, 2595, 2602
FriOI GRGCYC 3 cut(s) 2176, 2630, 2882
FspBI CTAG 5 cut(s) 737, 1134, 1812, 2228, 2547
GlaI GCGC 3 cut(s) 218, 248, 1650
GsuI CTGGAG 2 cut(s) 208, 2719
HaeII RGCGCY 1 cut(s) 1652
HaeIII GGCC 7 cut(s) 807, 820, 837, 1297, 1466, 1786, 2451
HgaI GACGC 2 cut(s) 91, 2012
HhaI GCGC 3 cut(s) 219, 249, 1651
Hin1I GRCGYC 1 cut(s) 83
Hin6I GCGC 3 cut(s) 217, 247, 1649
HinP1I GCGC 3 cut(s) 217, 247, 1649
HincII GTYRAC 2 cut(s) 1636, 1741
HindII GTYRAC 2 cut(s) 1636, 1741
HindIII AAGCTT 1 cut(s) 929
HphI GGTGA 9 cut(s) 100, 401, 698, 737, 743, 2006, 2423, 2471, 2941
Hpy166II GTNNAC 9 cut(s) 572, 689, 1396, 1628, 1636, 1672, 1741, 2329, 2462
Hpy8I GTNNAC 9 cut(s) 572, 689, 1396, 1628, 1636, 1672, 1741, 2329, 2462
Hpy99I CGWCG 2 cut(s) 61, 85
HpyAV CCTTC 5 cut(s) 371, 379, 993, 2066, 2408
HpyCH4III ACNGT 4 cut(s) 279, 303, 1424, 1845
HpyCH4IV ACGT 3 cut(s) 179, 1911, 2122
HpySE526I ACGT 3 cut(s) 179, 1911, 2122
Hsp92I GRCGYC 1 cut(s) 83
HspAI GCGC 3 cut(s) 217, 247, 1649
KpnI GGTACC 2 cut(s) 1194, 2686
Ksp22I TGATCA 3 cut(s) 507, 1681, 2535
LguI GCTCTTC 4 cut(s) 873, 1008, 1065, 2817
MabI ACCWGGT 1 cut(s) 2337
MaeI CTAG 5 cut(s) 737, 1134, 1812, 2228, 2547
MaeII ACGT 3 cut(s) 179, 1911, 2122
MaeIII GTNAC 6 cut(s) 145, 1160, 1290, 1978, 1994, 2947
MbiI CCGCTC 1 cut(s) 325
MfeI CAATTG 1 cut(s) 1692
MflI RGATCY 4 cut(s) 637, 1300, 2376, 2542
MhlI GDGCHC 7 cut(s) 607, 1129, 2176, 2518, 2630, 2671, 2882
MlsI TGGCCA 2 cut(s) 820, 837
MluNI TGGCCA 2 cut(s) 820, 837
MlyI GAGTC 5 cut(s) 170, 415, 551, 1895, 2770
MmeI TCCRAC 5 cut(s) 143, 144, 261, 1739, 2936
Mox20I TGGCCA 2 cut(s) 820, 837
MroXI GAANNNNTTC 2 cut(s) 448, 2815
MscI TGGCCA 2 cut(s) 820, 837
MseI TTAA 8 cut(s) 114, 945, 975, 1905, 2117, 2420, 2444, 2573
MslI CAYNNNNRTG 2 cut(s) 2723, 2792
Msp20I TGGCCA 2 cut(s) 820, 837
MspA1I CMGCKG 2 cut(s) 750, 2918
MspCI CTTAAG 1 cut(s) 1904
MspR9I CCNGG 8 cut(s) 52, 226, 530, 621, 1129, 1130, 1862, 2339
MunI CAATTG 1 cut(s) 1692
Mva1269I GAATGC 2 cut(s) 1349, 2643
MvaI CCWGG 3 cut(s) 226, 621, 2339
MvnI CGCG 2 cut(s) 786, 2635
NciI CCSGG 5 cut(s) 52, 530, 1129, 1130, 1862
NcoI CCATGG 1 cut(s) 1153
NdeI CATATG 1 cut(s) 823
NlaIV GGNNCC 6 cut(s) 1192, 1560, 1674, 2175, 2544, 2684
NmuCI GTSAC 4 cut(s) 1290, 1978, 1994, 2947
NruI TCGCGA 1 cut(s) 786
NspI RCATGY 4 cut(s) 241, 361, 1168, 2722
PaeR7I CTCGAG 2 cut(s) 230, 2664
PagI TCATGA 2 cut(s) 1678, 2793
PciI ACATGT 3 cut(s) 237, 357, 2718
PciSI GCTCTTC 4 cut(s) 873, 1008, 1065, 2817
PctI GAATGC 2 cut(s) 1349, 2643
PdmI GAANNNNTTC 2 cut(s) 448, 2815
PfeI GAWTC 5 cut(s) 91, 1898, 1967, 2191, 2231
Pfl23II CGTACG 1 cut(s) 2692
PflMI CCANNNNNTGG 1 cut(s) 445
PinAI ACCGGT 1 cut(s) 1630
Ple19I CGATCG 1 cut(s) 66
PleI GAGTC 5 cut(s) 169, 415, 551, 1894, 2770
PpsI GAGTC 5 cut(s) 169, 415, 551, 1894, 2770
PpuMI RGGWCCY 1 cut(s) 713
PscI ACATGT 3 cut(s) 237, 357, 2718
PshBI ATTAAT 1 cut(s) 975
Psp124BI GAGCTC 1 cut(s) 2630
Psp5II RGGWCCY 1 cut(s) 713
Psp6I CCWGG 3 cut(s) 224, 619, 2337
PspEI GGTNACC 2 cut(s) 1994, 2947
PspGI CCWGG 3 cut(s) 224, 619, 2337
PspLI CGTACG 1 cut(s) 2692
PspN4I GGNNCC 6 cut(s) 1192, 1560, 1674, 2175, 2544, 2684
PspPI GGNCC 6 cut(s) 713, 779, 1628, 1672, 2054, 2450
PspPPI RGGWCCY 1 cut(s) 713
PstI CTGCAG 4 cut(s) 712, 1036, 1748, 2624
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 4 cut(s) 637, 1300, 2376, 2542
PvuI CGATCG 1 cut(s) 66
PvuII CAGCTG 1 cut(s) 2918
RruI TCGCGA 1 cut(s) 786
RsaI GTAC 7 cut(s) 173, 1054, 1192, 2343, 2618, 2684, 2694
RsaNI GTAC 7 cut(s) 172, 1053, 1191, 2342, 2617, 2683, 2693
RseI CAYNNNNRTG 2 cut(s) 2723, 2792
SacI GAGCTC 1 cut(s) 2630
SapI GCTCTTC 4 cut(s) 873, 1008, 1065, 2817
SaqAI TTAA 8 cut(s) 114, 945, 975, 1905, 2117, 2420, 2444, 2573
Sau96I GGNCC 6 cut(s) 713, 779, 1628, 1672, 2054, 2450
SchI GAGTC 5 cut(s) 170, 415, 551, 1895, 2770
ScrFI CCNGG 8 cut(s) 52, 226, 530, 621, 1129, 1130, 1862, 2339
SduI GDGCHC 7 cut(s) 607, 1129, 2176, 2518, 2630, 2671, 2882
SexAI ACCWGGT 1 cut(s) 2337
SfcI CTRYAG 5 cut(s) 708, 1032, 1420, 1744, 2620
Sfr274I CTCGAG 2 cut(s) 230, 2664
SgrAI CRCCGGYG 1 cut(s) 85
SinI GGWCC 5 cut(s) 713, 779, 1628, 1672, 2054
SlaI CTCGAG 2 cut(s) 230, 2664
SmaI CCCGGG 1 cut(s) 1130
SmiMI CAYNNNNRTG 2 cut(s) 2723, 2792
SmlI CTYRAG 5 cut(s) 230, 801, 1109, 1904, 2664
SmoI CTYRAG 5 cut(s) 230, 801, 1109, 1904, 2664
SrfI GCCCGGGC 1 cut(s) 1130
SsiI CCGC 9 cut(s) 5, 202, 313, 325, 401, 750, 1010, 1828, 2593
SspI AATATT 1 cut(s) 2211
SspMI CTAG 5 cut(s) 737, 1134, 1812, 2228, 2547
SstI GAGCTC 1 cut(s) 2630
StyD4I CCNGG 8 cut(s) 50, 224, 528, 619, 1127, 1128, 1860, 2337
StyI CCWWGG 4 cut(s) 1153, 1169, 1372, 2731
TaaI ACNGT 4 cut(s) 279, 303, 1424, 1845
TaiI ACGT 3 cut(s) 182, 1914, 2125
TaqI TCGA 6 cut(s) 66, 231, 553, 1068, 2151, 2665
TatI WGTACW 2 cut(s) 1052, 2616
TauI GCSGC 1 cut(s) 1830
TfiI GAWTC 5 cut(s) 91, 1898, 1967, 2191, 2231
Tru1I TTAA 8 cut(s) 114, 945, 975, 1905, 2117, 2420, 2444, 2573
Tru9I TTAA 8 cut(s) 114, 945, 975, 1905, 2117, 2420, 2444, 2573
TseFI GTSAC 4 cut(s) 1290, 1978, 1994, 2947
Tsp45I GTSAC 4 cut(s) 1290, 1978, 1994, 2947
TspDTI ATGAA 8 cut(s) 821, 1528, 1884, 1980, 2082, 2517, 2772, 2810
TspGWI ACGGA 2 cut(s) 352, 2479
TspMI CCCGGG 1 cut(s) 1128
Van91I CCANNNNNTGG 1 cut(s) 445
Vha464I CTTAAG 1 cut(s) 1904
VpaK11BI GGWCC 5 cut(s) 713, 779, 1628, 1672, 2054
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 3 cut(s) 768, 1729, 2467
XceI RCATGY 4 cut(s) 241, 361, 1168, 2722
XhoI CTCGAG 2 cut(s) 230, 2664
XmaI CCCGGG 1 cut(s) 1128
XmiI GTMKAC 1 cut(s) 1395
XmnI GAANNNNTTC 2 cut(s) 448, 2815
XspI CTAG 5 cut(s) 737, 1134, 1812, 2228, 2547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.