No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g01322 |
| rosa_laevigata | RLG00000022497 RLG00000033859 |
| rosa_roxburghii | Rroxscaffold_4G00317450 Rroxscaffold_6G00416200 |
| rosa_rugosa | Rorug05G0519400 |
| rosa_samantha | Rh4DG314500 Rh6CG256900 Rh6DG248900 |
| rosa_wichuraiana | Rw1G010230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 152 |
| Acc36I | ACCTGC | 1 cut(s) | 152 |
| AccI | GTMKAC | 1 cut(s) | 84 |
| AcsI | RAATTY | 1 cut(s) | 63 |
| AfaI | GTAC | 1 cut(s) | 181 |
| AflII | CTTAAG | 1 cut(s) | 43 |
| AluBI | AGCT | 1 cut(s) | 227 |
| AluI | AGCT | 1 cut(s) | 227 |
| Alw26I | GTCTC | 2 cut(s) | 111, 263 |
| AoxI | GGCC | 1 cut(s) | 91 |
| ApoI | RAATTY | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 126, 160 |
| BclI | TGATCA | 1 cut(s) | 31 |
| BcoDI | GTCTC | 2 cut(s) | 111, 263 |
| BfaI | CTAG | 1 cut(s) | 274 |
| BfrI | CTTAAG | 1 cut(s) | 43 |
| BfuAI | ACCTGC | 1 cut(s) | 152 |
| BmcAI | AGTACT | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BpuEI | CTTGAG | 1 cut(s) | 213 |
| BsaI | GGTCTC | 1 cut(s) | 263 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 133, 163 |
| Bse1I | ACTGG | 1 cut(s) | 102 |
| BseGI | GGATG | 1 cut(s) | 271 |
| BseNI | ACTGG | 1 cut(s) | 102 |
| BshFI | GGCC | 1 cut(s) | 93 |
| BsmAI | GTCTC | 2 cut(s) | 111, 263 |
| BsnI | GGCC | 1 cut(s) | 93 |
| Bso31I | GGTCTC | 1 cut(s) | 263 |
| Bsp143I | GATC | 3 cut(s) | 31, 50, 160 |
| BspANI | GGCC | 1 cut(s) | 93 |
| BspMI | ACCTGC | 1 cut(s) | 152 |
| BspTI | CTTAAG | 1 cut(s) | 43 |
| BspTNI | GGTCTC | 1 cut(s) | 263 |
| BsrI | ACTGG | 1 cut(s) | 102 |
| BssMI | GATC | 3 cut(s) | 31, 50, 160 |
| BssNAI | GTATAC | 1 cut(s) | 85 |
| Bst1107I | GTATAC | 1 cut(s) | 85 |
| Bst4CI | ACNGT | 3 cut(s) | 73, 82, 89 |
| BstAFI | CTTAAG | 1 cut(s) | 43 |
| BstF5I | GGATG | 1 cut(s) | 271 |
| BstKTI | GATC | 3 cut(s) | 34, 53, 163 |
| BstMAI | GTCTC | 2 cut(s) | 111, 263 |
| BstMBI | GATC | 3 cut(s) | 31, 50, 160 |
| BstZ17I | GTATAC | 1 cut(s) | 85 |
| BsuRI | GGCC | 1 cut(s) | 93 |
| BtsCI | GGATG | 1 cut(s) | 271 |
| BtsIMutI | CAGTG | 1 cut(s) | 95 |
| BveI | ACCTGC | 1 cut(s) | 152 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| Csp6I | GTAC | 1 cut(s) | 180 |
| CviJI | RGCY | 2 cut(s) | 93, 227 |
| CviKI_1 | RGCY | 2 cut(s) | 93, 227 |
| CviQI | GTAC | 1 cut(s) | 180 |
| DpnI | GATC | 3 cut(s) | 33, 52, 162 |
| DpnII | GATC | 3 cut(s) | 31, 50, 160 |
| Eco31I | GGTCTC | 1 cut(s) | 263 |
| FaiI | YATR | 3 cut(s) | 36, 85, 122 |
| FbaI | TGATCA | 1 cut(s) | 31 |
| FblI | GTMKAC | 1 cut(s) | 84 |
| FspBI | CTAG | 1 cut(s) | 274 |
| HaeIII | GGCC | 1 cut(s) | 93 |
| HincII | GTYRAC | 1 cut(s) | 245 |
| HindII | GTYRAC | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 3 cut(s) | 11, 85, 245 |
| Hpy188III | TCNNGA | 1 cut(s) | 230 |
| Hpy8I | GTNNAC | 3 cut(s) | 11, 85, 245 |
| HpyAV | CCTTC | 2 cut(s) | 233, 256 |
| HpyCH4III | ACNGT | 3 cut(s) | 73, 82, 89 |
| HpyCH4V | TGCA | 2 cut(s) | 131, 155 |
| Ksp22I | TGATCA | 1 cut(s) | 31 |
| Kzo9I | GATC | 3 cut(s) | 31, 50, 160 |
| LpnPI | CCDG | 5 cut(s) | 43, 83, 157, 165, 237 |
| MaeI | CTAG | 1 cut(s) | 274 |
| MalI | GATC | 3 cut(s) | 33, 52, 162 |
| MboI | GATC | 3 cut(s) | 31, 50, 160 |
| MboII | GAAGA | 1 cut(s) | 248 |
| MluCI | AATT | 2 cut(s) | 63, 132 |
| MnlI | CCTC | 1 cut(s) | 226 |
| MseI | TTAA | 2 cut(s) | 24, 44 |
| MspCI | CTTAAG | 1 cut(s) | 43 |
| NdeII | GATC | 3 cut(s) | 31, 50, 160 |
| PaqCI | CACCTGC | 1 cut(s) | 152 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 181 |
| RsaNI | GTAC | 1 cut(s) | 180 |
| SaqAI | TTAA | 2 cut(s) | 24, 44 |
| Sau3AI | GATC | 3 cut(s) | 31, 50, 160 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| ScaI | AGTACT | 1 cut(s) | 181 |
| SetI | ASST | 5 cut(s) | 146, 178, 229, 244, 275 |
| SmlI | CTYRAG | 2 cut(s) | 43, 228 |
| SmoI | CTYRAG | 2 cut(s) | 43, 228 |
| Sse9I | AATT | 2 cut(s) | 63, 132 |
| SspMI | CTAG | 1 cut(s) | 274 |
| TaaI | ACNGT | 3 cut(s) | 73, 82, 89 |
| TaqI | TCGA | 1 cut(s) | 136 |
| TasI | AATT | 2 cut(s) | 63, 132 |
| TatI | WGTACW | 1 cut(s) | 179 |
| Tru1I | TTAA | 2 cut(s) | 24, 44 |
| Tru9I | TTAA | 2 cut(s) | 24, 44 |
| TscAI | CASTG | 1 cut(s) | 102 |
| TspDTI | ATGAA | 1 cut(s) | 183 |
| TspGWI | ACGGA | 1 cut(s) | 274 |
| TspRI | CASTG | 1 cut(s) | 102 |
| Vha464I | CTTAAG | 1 cut(s) | 43 |
| XapI | RAATTY | 1 cut(s) | 63 |
| XmiI | GTMKAC | 1 cut(s) | 84 |
| XspI | CTAG | 1 cut(s) | 274 |
| ZrmI | AGTACT | 1 cut(s) | 181 |