Rw4G025210

Zinc finger protein CONSTANS-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0009189
Physical Location & Seq
Forward (+)
51216350 .. 51219874
3525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G025210.1

Sequence Viewer

Length: 1434 bp
ATGGTGAGTTCGAAACCGGCGACCGCCGGAGAGAGTATTCCCTGCGATTTCTGCAGCGAGCAGCCGGCGGTGCTCTACTGTAAGGCCGACTCGGCCAAGCTGTGCTTGTTCTGCGACCAGCACGTGCACGGCGCCAACTTGCTGTCCAGGAAGCACGTGCGGTCCCAGATCTGCGACAACTGCGCCTCCGACGCCGTCGCCTTCCGGTGCTCCACCGACAACTTGGTCCTCTGCCACGAGTGCGACTGGGACGCCCACGGCAGCTGCTCCGTCTCCGCCGCACACGATCGCACCCCGATCGAGGGCTTCTCCGGCTGCCCCTCGCCGCTCGAGCTCGCCGCCCTCTGGGGGCTAGATCTCCACAAGAATAATCCGGGTCGGGTCGGCGGCGGCGGCGGCGGCCCGGTGGACCCGACCCGGAACTGGGAGCTGGAGTCGTCGTGGAGCGGGGTGAACTTCCAGGACCTGATCGTGCCGAGCCAGAACGGCGAGGTGTACCGGAACTGCGGGGAGGTGGCTCCGGCGAAGAGACAGGGATCCGGGGGCAGCTTGGGGAAGTATAAGCAGGGGATTCAGAAGCAGCTGGTGGAGCTGCTCAAGAGGGATTTCGACGGCGGCGGAGAGAATCTGGAGCCGGCGGCGGTGGAGGGAAATGATAATGGGAGTAATAATGTTAATGTTAATGTGAATGCGAATGCGGAAGGGTTTGATGTGGAGAATGGAAGAGTTGATGGGGTGAATGTAGGTTCTGTTGCCGTTTCGCAGCCGTTGTTGCAGCAACAAGCGCCGTTCACGTCGCTGCTGATGATGGCCGAAGGCATTGTTGACCGAGATATGTTGTGGGATACCAACCCCCATGGCCACAACACTCAAGGCACACAGATATGGGATTTTAATCTAGGAAAGTCGAGGGATCATGAAGAAACAGTTCCATTGGATGTCCCATATGGTTCAGGTGGTTCGGGATTCATGATTAAGAATTTTAGTGAACTTCTGAAAGAAGCATCTTTCACTGATACGAAAATGTATGGAGATATGTACCAGATGAATTGCCCTATTGGACAAGATGATATCAAATTCAATATCAACTCAAATAACCCAGCAGTGAGTCAGGGGCCAGCAACATCTGAGAGCAACAACATCTCTATTGGCCGGCCATCATCAGGGTCTGCTTTTGGTGAAGACAAAGGCAACATTGCCACTACGGAAGGACCTTTCCTTATAAGAAGTGACAGTCTGCGAACGACAGGAACAAAGGCTGACATGGAGCTGCTTGCGCAAAACAGGGGCAATGCTATGCTGCGTTACAAAGAGAAGAAGAAAAACCGAAGATACGACAAGCACATAAGATACGAATCCAGGAAGGCAAGAGCTGATACTAGGAAGCGAGTCAAGGGTCGATTTGTTAAGGCTACGGAAGCCCCTGATGGTTAG

Protein Analysis

477

Amino Acids

51.67

Weight (kDa)

5.73

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCT PF06203 429 - 471 1.2e-16 CCT motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1223
AasI GACNNNNNNGTC 1 cut(s) 224
Acc16I TGCGCA 1 cut(s) 1278
AccB1I GGYRCC 1 cut(s) 131
AccBSI CCGCTC 2 cut(s) 328, 447
AclWI GGATC 3 cut(s) 531, 544, 921
AcoI YGGCCR 5 cut(s) 93, 810, 859, 1150, 1154
AcsI RAATTY 2 cut(s) 979, 1076
AcvI CACGTG 2 cut(s) 124, 157
AcyI GRCGYC 3 cut(s) 132, 192, 252
AfaI GTAC 2 cut(s) 497, 1040
AfiI CCNNNNNNNGG 7 cut(s) 301, 302, 345, 348, 423, 424, 1163
AgsI TTSAA 1 cut(s) 1081
AjiI CACGTC 1 cut(s) 795
AjnI CCWGG 3 cut(s) 146, 459, 1358
AluBI AGCT 9 cut(s) 100, 264, 334, 430, 549, 583, 592, 1270, 1373
AluI AGCT 9 cut(s) 100, 264, 334, 430, 549, 583, 592, 1270, 1373
Alw21I GWGCWC 4 cut(s) 75, 129, 212, 336
Alw26I GTCTC 2 cut(s) 277, 523
Alw44I GTGCAC 1 cut(s) 125
AlwI GGATC 3 cut(s) 531, 544, 921
AlwNI CAGNNNCTG 2 cut(s) 466, 1169
Ama87I CYCGRG 1 cut(s) 329
AoxI GGCC 8 cut(s) 84, 93, 400, 810, 859, 1115, 1150, 1154
ApaLI GTGCAC 1 cut(s) 125
ApoI RAATTY 2 cut(s) 979, 1076
Asp700I GAANNNNTTC 1 cut(s) 927
AspLEI GCGC 4 cut(s) 134, 185, 787, 1279
AspS9I GGNCC 7 cut(s) 162, 226, 401, 409, 463, 1115, 1211
AsuC2I CCSGG 4 cut(s) 375, 404, 418, 541
AsuHPI GGTGA 4 cut(s) 16, 463, 748, 1190
AsuII TTCGAA 1 cut(s) 11
AvaI CYCGRG 1 cut(s) 329
AvaII GGWCC 5 cut(s) 162, 226, 409, 463, 1211
BaeGI GKGCMC 1 cut(s) 129
BalI TGGCCA 1 cut(s) 861
BamHI GGATCC 1 cut(s) 536
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 1 cut(s) 336
BauI CACGAG 1 cut(s) 236
BbrPI CACGTG 2 cut(s) 124, 157
BbsI GAAGAC 1 cut(s) 1188
Bbv12I GWGCWC 4 cut(s) 75, 129, 212, 336
BccI CCATC 4 cut(s) 725, 802, 1165, 1421
BceAI ACGGC 8 cut(s) 145, 179, 274, 502, 628, 740, 751, 772
BcgI CGANNNNNNTGC 2 cut(s) 280, 314
BciT130I CCWGG 3 cut(s) 148, 461, 1360
BciVI GTATCC 1 cut(s) 838
BcnI CCSGG 4 cut(s) 375, 404, 418, 541
BcoDI GTCTC 2 cut(s) 277, 523
BfaI CTAG 3 cut(s) 353, 899, 1380
BfmI CTRYAG 1 cut(s) 52
BfoI RGCGCY 2 cut(s) 135, 788
BfuI GTATCC 1 cut(s) 838
BglI GCCNNNNNGGC 2 cut(s) 92, 486
BglII AGATCT 2 cut(s) 168, 355
Bme1390I CCNGG 7 cut(s) 148, 375, 404, 418, 461, 541, 1360
Bme18I GGWCC 5 cut(s) 162, 226, 409, 463, 1211
BmeT110I CYCGRG 1 cut(s) 329
BmgBI CACGTC 1 cut(s) 795
BmgT120I GGNCC 7 cut(s) 162, 226, 401, 409, 463, 1115, 1211
BmiI GGNNCC 7 cut(s) 133, 164, 411, 519, 538, 633, 1116
BmrFI CCNGG 7 cut(s) 148, 375, 404, 418, 461, 541, 1360
BmrI ACTGGG 2 cut(s) 256, 433
BmsI GCATC 1 cut(s) 1013
BmuI ACTGGG 2 cut(s) 256, 433
BpiI GAAGAC 1 cut(s) 1188
BplI GAGNNNNNCTC 2 cut(s) 293, 325
BpmI CTGGAG 2 cut(s) 452, 650
Bpu14I TTCGAA 1 cut(s) 11
BpuEI CTTGAG 2 cut(s) 581, 855
BpuMI CCSGG 4 cut(s) 375, 404, 418, 541
BsaAI YACGTR 2 cut(s) 124, 157
BsaBI GATNNNNATC 2 cut(s) 894, 1354
BsaHI GRCGYC 3 cut(s) 132, 192, 252
BsaJI CCNNGG 3 cut(s) 256, 540, 856
BsaWI WCCGGW 2 cut(s) 204, 498
BsaXI ACNNNNNCTCC 6 cut(s) 170, 200, 419, 425, 449, 455
Bsc4I CCNNNNNNNGG 7 cut(s) 301, 302, 345, 348, 423, 424, 1163
Bse118I RCCGGY 4 cut(s) 16, 64, 634, 1152
Bse1I ACTGG 2 cut(s) 251, 428
Bse3DI GCAATG 2 cut(s) 1194, 1297
Bse8I GATNNNNATC 2 cut(s) 894, 1354
BseBI CCWGG 3 cut(s) 148, 461, 1360
BseDI CCNNGG 3 cut(s) 256, 540, 856
BseGI GGATG 1 cut(s) 943
BseJI GATNNNNATC 2 cut(s) 894, 1354
BseLI CCNNNNNNNGG 7 cut(s) 301, 302, 345, 348, 423, 424, 1163
BseMI GCAATG 2 cut(s) 1194, 1297
BseMII CTCAG 1 cut(s) 1119
BseNI ACTGG 2 cut(s) 251, 428
BseSI GKGCMC 1 cut(s) 129
BseYI CCCAGC 1 cut(s) 1099
Bsh1285I CGRYCG 3 cut(s) 24, 289, 300
BshFI GGCC 8 cut(s) 86, 95, 402, 812, 861, 1117, 1152, 1156
BshNI GGYRCC 1 cut(s) 131
BsiEI CGRYCG 3 cut(s) 24, 289, 300
BsiHKAI GWGCWC 4 cut(s) 75, 129, 212, 336
BsiHKCI CYCGRG 1 cut(s) 329
BslFI GGGAC 3 cut(s) 148, 263, 926
BslI CCNNNNNNNGG 7 cut(s) 301, 302, 345, 348, 423, 424, 1163
BsmAI GTCTC 2 cut(s) 277, 523
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 3 cut(s) 148, 263, 926
BsmI GAATGC 2 cut(s) 694, 700
BsnI GGCC 8 cut(s) 86, 95, 402, 812, 861, 1117, 1152, 1156
BsoBI CYCGRG 1 cut(s) 329
Bsp119I TTCGAA 1 cut(s) 11
Bsp1286I GDGCHC 4 cut(s) 75, 129, 212, 336
Bsp143I GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
Bsp19I CCATGG 1 cut(s) 856
BspANI GGCC 8 cut(s) 86, 95, 402, 812, 861, 1117, 1152, 1156
BspCNI CTCAG 1 cut(s) 1120
BspHI TCATGA 2 cut(s) 916, 969
BspLI GGNNCC 7 cut(s) 133, 164, 411, 519, 538, 633, 1116
BspMAI CTGCAG 1 cut(s) 56
BspPI GGATC 3 cut(s) 531, 544, 921
BspT104I TTCGAA 1 cut(s) 11
BspT107I GGYRCC 1 cut(s) 131
BsrBI CCGCTC 2 cut(s) 328, 447
BsrDI GCAATG 2 cut(s) 1194, 1297
BsrFI RCCGGY 4 cut(s) 16, 64, 634, 1152
BsrI ACTGG 2 cut(s) 251, 428
BssAI RCCGGY 4 cut(s) 16, 64, 634, 1152
BssECI CCNNGG 3 cut(s) 256, 540, 856
BssMI GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
BssNI GRCGYC 3 cut(s) 132, 192, 252
BssSI CACGAG 1 cut(s) 236
BssT1I CCWWGG 1 cut(s) 856
Bst2BI CACGAG 1 cut(s) 236
Bst2UI CCWGG 3 cut(s) 148, 461, 1360
Bst4CI ACNGT 3 cut(s) 80, 928, 1235
Bst6I CTCTTC 2 cut(s) 521, 718
BstACI GRCGYC 3 cut(s) 132, 192, 252
BstBAI YACGTR 2 cut(s) 124, 157
BstBI TTCGAA 1 cut(s) 11
BstC8I GCNNGC 7 cut(s) 59, 66, 336, 636, 1119, 1154, 1275
BstDEI CTNAG 1 cut(s) 1128
BstDSI CCRYGG 2 cut(s) 256, 856
BstF5I GGATG 1 cut(s) 943
BstH2I RGCGCY 2 cut(s) 135, 788
BstHHI GCGC 4 cut(s) 134, 185, 787, 1279
BstKTI GATC 7 cut(s) 171, 289, 300, 358, 471, 539, 916
BstMAI GTCTC 2 cut(s) 277, 523
BstMBI GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
BstMCI CGRYCG 3 cut(s) 24, 289, 300
BstNI CCWGG 3 cut(s) 148, 461, 1360
BstSCI CCNGG 7 cut(s) 146, 373, 402, 416, 459, 539, 1358
BstSFI CTRYAG 1 cut(s) 52
BstSLI GKGCMC 1 cut(s) 129
BstV2I GAAGAC 1 cut(s) 1188
BstX2I RGATCY 3 cut(s) 168, 355, 536
BstYI RGATCY 3 cut(s) 168, 355, 536
BsuI GTATCC 1 cut(s) 838
BsuRI GGCC 8 cut(s) 86, 95, 402, 812, 861, 1117, 1152, 1156
BtgI CCRYGG 2 cut(s) 256, 856
BtrI CACGTC 1 cut(s) 795
BtsCI GGATG 1 cut(s) 943
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 2 cut(s) 1011, 1110
Cac8I GCNNGC 7 cut(s) 59, 66, 336, 636, 1119, 1154, 1275
CaiI CAGNNNCTG 2 cut(s) 466, 1169
CciI TCATGA 2 cut(s) 916, 969
CfoI GCGC 4 cut(s) 134, 185, 787, 1279
Cfr10I RCCGGY 4 cut(s) 16, 64, 634, 1152
Cfr13I GGNCC 7 cut(s) 162, 226, 401, 409, 463, 1115, 1211
CseI GACGC 2 cut(s) 200, 260
Csp6I GTAC 2 cut(s) 496, 1039
CviAII CATG 4 cut(s) 857, 917, 970, 1264
CviQI GTAC 2 cut(s) 496, 1039
DdeI CTNAG 1 cut(s) 1128
DinI GGCGCC 1 cut(s) 133
DpnI GATC 7 cut(s) 170, 288, 299, 357, 470, 538, 915
DpnII GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
DrdI GACNNNNNNGTC 1 cut(s) 224
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 5 cut(s) 93, 810, 859, 1150, 1154
Eam1104I CTCTTC 2 cut(s) 521, 718
EarI CTCTTC 2 cut(s) 521, 718
EciI GGCGGA 2 cut(s) 265, 633
Ecl136II GAGCTC 1 cut(s) 334
Eco130I CCWWGG 1 cut(s) 856
Eco24I GRGCYC 1 cut(s) 336
Eco32I GATATC 1 cut(s) 1072
Eco47I GGWCC 5 cut(s) 162, 226, 409, 463, 1211
Eco53kI GAGCTC 1 cut(s) 334
Eco72I CACGTG 2 cut(s) 124, 157
Eco88I CYCGRG 1 cut(s) 329
EcoICRI GAGCTC 1 cut(s) 334
EcoO109I RGGNCCY 2 cut(s) 463, 1211
EcoRII CCWGG 3 cut(s) 146, 459, 1358
EcoRV GATATC 1 cut(s) 1072
EcoT14I CCWWGG 1 cut(s) 856
EcoT38I GRGCYC 1 cut(s) 336
EgeI GGCGCC 1 cut(s) 133
EheI GGCGCC 1 cut(s) 133
ErhI CCWWGG 1 cut(s) 856
Esp3I CGTCTC 1 cut(s) 277
FaeI CATG 4 cut(s) 860, 920, 973, 1267
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FaqI GGGAC 3 cut(s) 148, 263, 926
FatI CATG 4 cut(s) 856, 916, 969, 1263
FauI CCCGC 2 cut(s) 440, 500
FauNDI CATATG 1 cut(s) 946
FokI GGATG 1 cut(s) 950
FriOI GRGCYC 1 cut(s) 336
FseI GGCCGGCC 1 cut(s) 1156
FspBI CTAG 3 cut(s) 353, 899, 1380
FspI TGCGCA 1 cut(s) 1278
GlaI GCGC 4 cut(s) 133, 184, 786, 1278
GsaI CCCAGC 1 cut(s) 1103
GsuI CTGGAG 2 cut(s) 452, 650
HaeII RGCGCY 2 cut(s) 135, 788
HaeIII GGCC 8 cut(s) 86, 95, 402, 812, 861, 1117, 1152, 1156
HgaI GACGC 2 cut(s) 200, 260
HhaI GCGC 4 cut(s) 134, 185, 787, 1279
Hin1I GRCGYC 3 cut(s) 132, 192, 252
Hin1II CATG 4 cut(s) 860, 920, 973, 1267
Hin6I GCGC 4 cut(s) 132, 183, 785, 1277
HinP1I GCGC 4 cut(s) 132, 183, 785, 1277
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HinfI GANTC 8 cut(s) 89, 434, 571, 625, 966, 1108, 1355, 1389
HphI GGTGA 4 cut(s) 16, 463, 748, 1190
Hpy166II GTNNAC 7 cut(s) 127, 409, 454, 496, 792, 826, 989
Hpy188I TCNGA 4 cut(s) 190, 576, 996, 1129
Hpy188III TCNNGA 5 cut(s) 598, 629, 917, 963, 970
Hpy8I GTNNAC 7 cut(s) 127, 409, 454, 496, 792, 826, 989
Hpy99I CGWCG 5 cut(s) 194, 200, 442, 614, 799
HpyAV CCTTC 5 cut(s) 211, 695, 809, 1202, 1357
HpyCH4III ACNGT 3 cut(s) 80, 928, 1235
HpyCH4IV ACGT 3 cut(s) 123, 156, 794
HpyCH4V TGCA 3 cut(s) 54, 127, 775
HpyF3I CTNAG 1 cut(s) 1128
HpySE526I ACGT 3 cut(s) 123, 156, 794
Hsp92I GRCGYC 3 cut(s) 132, 192, 252
Hsp92II CATG 4 cut(s) 860, 920, 973, 1267
HspAI GCGC 4 cut(s) 132, 183, 785, 1277
KasI GGCGCC 1 cut(s) 131
KroI GCCGGC 3 cut(s) 64, 634, 1152
KroNI GCCGGC 3 cut(s) 66, 636, 1154
Kzo9I GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
LmnI GCTCC 8 cut(s) 215, 272, 427, 444, 523, 589, 631, 1267
LweI GCATC 1 cut(s) 1013
MaeI CTAG 3 cut(s) 353, 899, 1380
MaeII ACGT 3 cut(s) 123, 156, 794
MaeIII GTNAC 2 cut(s) 1229, 1304
MalI GATC 7 cut(s) 170, 288, 299, 357, 470, 538, 915
MbiI CCGCTC 2 cut(s) 328, 447
MboI GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
MboII GAAGA 7 cut(s) 538, 735, 932, 1193, 1327, 1330, 1341
MflI RGATCY 3 cut(s) 168, 355, 536
MhlI GDGCHC 4 cut(s) 75, 129, 212, 336
MlsI TGGCCA 1 cut(s) 861
MluCI AATT 3 cut(s) 979, 1048, 1076
MluNI TGGCCA 1 cut(s) 861
Mly113I GGCGCC 1 cut(s) 132
MlyI GAGTC 4 cut(s) 83, 443, 1117, 1398
MmeI TCCRAC 1 cut(s) 213
Mox20I TGGCCA 1 cut(s) 861
MroNI GCCGGC 3 cut(s) 64, 634, 1152
MroXI GAANNNNTTC 1 cut(s) 927
MscI TGGCCA 1 cut(s) 861
MseI TTAA 5 cut(s) 675, 681, 894, 975, 1407
MslI CAYNNNNRTG 1 cut(s) 883
Msp20I TGGCCA 1 cut(s) 861
MspA1I CMGCKG 2 cut(s) 264, 583
MspR9I CCNGG 7 cut(s) 148, 375, 404, 418, 461, 541, 1360
Mva1269I GAATGC 2 cut(s) 694, 700
MvaI CCWGG 3 cut(s) 148, 461, 1360
NaeI GCCGGC 3 cut(s) 66, 636, 1154
NarI GGCGCC 1 cut(s) 132
NciI CCSGG 4 cut(s) 375, 404, 418, 541
NcoI CCATGG 1 cut(s) 856
NdeI CATATG 1 cut(s) 946
NdeII GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
NgoMIV GCCGGC 3 cut(s) 64, 634, 1152
NlaIII CATG 4 cut(s) 860, 920, 973, 1267
NlaIV GGNNCC 7 cut(s) 133, 164, 411, 519, 538, 633, 1116
NmeAIII GCCGAG 2 cut(s) 71, 501
NmuCI GTSAC 1 cut(s) 1229
NsbI TGCGCA 1 cut(s) 1278
NspV TTCGAA 1 cut(s) 11
PaeR7I CTCGAG 1 cut(s) 329
PagI TCATGA 2 cut(s) 916, 969
PcsI WCGNNNNNNNCGW 1 cut(s) 17
PctI GAATGC 2 cut(s) 694, 700
PdiI GCCGGC 3 cut(s) 66, 636, 1154
PdmI GAANNNNTTC 1 cut(s) 927
PfeI GAWTC 4 cut(s) 571, 625, 966, 1355
PflFI GACNNNGTC 1 cut(s) 194
PfoI TCCNGGA 3 cut(s) 146, 459, 1358
Ple19I CGATCG 2 cut(s) 289, 300
PleI GAGTC 4 cut(s) 83, 442, 1116, 1397
PluTI GGCGCC 1 cut(s) 135
PmaCI CACGTG 2 cut(s) 124, 157
PmlI CACGTG 2 cut(s) 124, 157
PpsI GAGTC 4 cut(s) 83, 442, 1116, 1397
Ppu21I YACGTR 2 cut(s) 124, 157
PpuMI RGGWCCY 2 cut(s) 463, 1211
PsiI TTATAA 1 cut(s) 1223
Psp124BI GAGCTC 1 cut(s) 336
Psp5II RGGWCCY 2 cut(s) 463, 1211
Psp6I CCWGG 3 cut(s) 146, 459, 1358
PspCI CACGTG 2 cut(s) 124, 157
PspFI CCCAGC 1 cut(s) 1099
PspGI CCWGG 3 cut(s) 146, 459, 1358
PspN4I GGNNCC 7 cut(s) 133, 164, 411, 519, 538, 633, 1116
PspPI GGNCC 7 cut(s) 162, 226, 401, 409, 463, 1115, 1211
PspPPI RGGWCCY 2 cut(s) 463, 1211
PspXI VCTCGAGB 1 cut(s) 329
PstI CTGCAG 1 cut(s) 56
PstNI CAGNNNCTG 2 cut(s) 466, 1169
PsuI RGATCY 3 cut(s) 168, 355, 536
PsyI GACNNNGTC 1 cut(s) 194
PvuI CGATCG 2 cut(s) 289, 300
PvuII CAGCTG 2 cut(s) 264, 583
RigI GGCCGGCC 1 cut(s) 1156
RsaI GTAC 2 cut(s) 497, 1040
RsaNI GTAC 2 cut(s) 496, 1039
RseI CAYNNNNRTG 1 cut(s) 883
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 5 cut(s) 675, 681, 894, 975, 1407
Sau3AI GATC 7 cut(s) 168, 286, 297, 355, 468, 536, 913
Sau96I GGNCC 7 cut(s) 162, 226, 401, 409, 463, 1115, 1211
SchI GAGTC 4 cut(s) 83, 443, 1117, 1398
ScrFI CCNGG 7 cut(s) 148, 375, 404, 418, 461, 541, 1360
SduI GDGCHC 4 cut(s) 75, 129, 212, 336
SfaNI GCATC 1 cut(s) 1013
SfcI CTRYAG 1 cut(s) 52
SfiI GGCCNNNNNGGCC 1 cut(s) 92
SfoI GGCGCC 1 cut(s) 133
Sfr274I CTCGAG 1 cut(s) 329
SfuI TTCGAA 1 cut(s) 11
SinI GGWCC 5 cut(s) 162, 226, 409, 463, 1211
SlaI CTCGAG 1 cut(s) 329
SmiMI CAYNNNNRTG 1 cut(s) 883
SmlI CTYRAG 3 cut(s) 329, 596, 870
SmoI CTYRAG 3 cut(s) 329, 596, 870
Sse9I AATT 3 cut(s) 979, 1048, 1076
SspDI GGCGCC 1 cut(s) 131
SspMI CTAG 3 cut(s) 353, 899, 1380
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 7 cut(s) 146, 373, 402, 416, 459, 539, 1358
StyI CCWWGG 1 cut(s) 856
TaaI ACNGT 3 cut(s) 80, 928, 1235
TaiI ACGT 3 cut(s) 126, 159, 797
TaqI TCGA 6 cut(s) 11, 300, 330, 609, 908, 1399
TaqII GACCGA 1 cut(s) 843
TasI AATT 3 cut(s) 979, 1048, 1076
TfiI GAWTC 4 cut(s) 571, 625, 966, 1355
Tru1I TTAA 5 cut(s) 675, 681, 894, 975, 1407
Tru9I TTAA 5 cut(s) 675, 681, 894, 975, 1407
TscAI CASTG 2 cut(s) 1018, 1110
TseFI GTSAC 1 cut(s) 1229
Tsp45I GTSAC 1 cut(s) 1229
TspDTI ATGAA 3 cut(s) 933, 958, 1061
TspGWI ACGGA 3 cut(s) 259, 1220, 1430
TspRI CASTG 2 cut(s) 1018, 1110
Tth111I GACNNNGTC 1 cut(s) 194
VneI GTGCAC 1 cut(s) 125
VpaK11BI GGWCC 5 cut(s) 162, 226, 409, 463, 1211
XapI RAATTY 2 cut(s) 979, 1076
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XhoI CTCGAG 1 cut(s) 329
XmnI GAANNNNTTC 1 cut(s) 927
XspI CTAG 3 cut(s) 353, 899, 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.