Rw5G005560

Protein of unknown function (DUF616)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0011139
Physical Location & Seq
Forward (+)
5900717 .. 5905957
5241 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005560.1

Sequence Viewer

Length: 1749 bp
ATGACTACAGGGTCATTGGGAATTCGTTCAGGGAGTTATGGGTCTCTGGATAAACAGGCACAGAACAACAGCATCAGCATCATTAACAACGGAGTGTTGCCTATTCAATCTGCACGAAAGCCTTCGAAAATGCTCAAGGAGAAGGAGAGGCTGTTCCATTCGATCTGCAAATTTGCTGGTCGGAAAAAGGTGGGAATGTTGCTGCTGTGTGTAATCTCTGCTGCGGTTTTCGGATGGGTTTTGTATGTTGGAAAAGGTGAAGACTCACAAGAAGGCATCGCTCGCCAAAACATTAGTCTTAACGACAGTGTCATTTTAAGGAATCCTGAATCCTTGGTGAAAAACGACAAGCAAAGTTACAACATATCACCGCTAGCCTTGCCCCCTCCTCCTCCTGCTTTTTTCTTGGGTTATACTCTTCCTCCTGGGCATCCATGTAATATATTCTCGTTGCCTCCCCCACCAGCAGATAAGAAGAGAACTGGACCACGGCCTTGTCCAGTATGTTATCTTCCTGTTGAAGAAGCCATAGCCTTAATGCCAAAGGTCCCTTCATATTCTCCTGTTAAGAATTTGACATACATTTATGAAGAAAATTTATCAAGAGAAACAGAATTTGGAGGCTCAGATTTTGGCGGATATCCTACTTTGAAGCAAAGGAGTGATTCATATGATATAAGAGAGTCAATGAGTGTGCATTGTGGGTTTGTCAAAGGAAGTAAACCTGGGCGTAATACAGGGTATGATATGGATGAGGATGACCTACATGATATGGAGCAGTGTCATGGTGTGGTGGTTGCATCAGCTATATTTGCAAATTTTGATGAGATAAACCAGCCAAGGAACATTAGCGATTATTCCAGGGAGACTGTTTGCTTCTACATGTTTATAGACGAGGAGACAGAAGCTTATCTGAAGAACAGTAGTAAACTGGACAGCAGAAAGAAAATTGGTGTATGGAGAACTGTTGTTATTCATAACCCACCTTATACGGATGGAAGGCGCACTGGGAAGATTCCTAAGCTCCTAGTGCACAGAATGTTTCCCAATGCCCGCTTTTCCTTATGGATCGATGGGAAACTGGAGCTTGTCGTGGATCCATACCAAATTCTTGAAAGGTTTTTGTGGAGGAAGAATGCAACTTTTGCAATTTCTAGACATTATAAGCGCTTTGATGTGTTTACGGAAGCTGAGGCAAATAAAGTTGCTGGAAAATATGACAATGGCTCTATTGACTTTCAGGTTGAATTTTACAAAAAGGAAGGTTTGACCCCATATTCTGAGGCAAAACTTCCCATTACAAGTGATGTTCCCGAAGGATGTGTAATAATAAGGGAGCATGTCCCTATCAGCAACCTCTTCACTTGTCTTTGGTTCAATGAAGTTGATCGTTTTACTTCCAGGGACCAAATTAGTTTTTCAACTGTCAGAGATCACATTACGGCAAAGACAAACTGGACTATCAATATGTTCCTTGACTGTGAAAGGCGCAATTTCGTAGTTCAGAAATACCATAAAGATGTATTAGAGCACATGGCTCCTCATATTCCTGTTGCTGCTCTTCCACCACCACTACCGCCATCACTGCCACCACCAGCTTTAAGTAATGAACCACCAGTCAAACCAGTTGAAACGGCGCCTGAAAGGCCAGTAAGGAAGATCCAACCAGGGCGCCGGAGAGAAAGGAGGCCTGGTTCCAGACGTCACCGCAAAGTTATTACCGGAAATAGAGACACTGATACAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF616

Protein Analysis

582

Amino Acids

65.94

Weight (kDa)

9.06

Isoelectric Point (pI)

55.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TOD1_MUCI70 PF04765 192 - 505 8.5e-152 TOD1/MUCI70, glycosyltransferase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011139)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G28240
fragaria_vesca FvH4_3g09110 FvH4_3g09110 FvH4_3g09110 FvH4_3g09110
malus_domestica MD05G1338800.v1.1 MD10G1293800.v1.1
prunus_persica Prupe.4G048000_v2.0.a1 Prupe.4G048000_v2.0.a1 Prupe.4G048000_v2.0.a1
pyrus_communis pycom05g29010 pycom10g24570
rosa_chinensis RchiOBHm_Chr5g0008541
rosa_laevigata RLG00000031578
rosa_multiflora Rmu_sc0001665.1_g000015
rosa_roxburghii Rroxscaffold_1G00068020
rosa_rugosa Rorug04G0436600
rosa_samantha Rh5BG062700 Rh5DG063400
rosa_wichuraiana Rw5G005560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1164
AasI GACNNNNNNGTC 1 cut(s) 10
AatII GACGTC 1 cut(s) 1705
AccB1I GGYRCC 2 cut(s) 1636, 1671
AciI CCGC 6 cut(s) 224, 371, 636, 1054, 1577, 1708
AclWI GGATC 4 cut(s) 1076, 1091, 1104, 1654
AcsI RAATTY 8 cut(s) 21, 170, 571, 595, 614, 817, 1107, 1247
AcuI CTGAAG 1 cut(s) 935
AcyI GRCGYC 3 cut(s) 1637, 1672, 1702
AfeI AGCGCT 1 cut(s) 1169
AflIII ACRYGT 1 cut(s) 882
AgsI TTSAA 8 cut(s) 107, 521, 652, 1115, 1247, 1378, 1422, 1631
AjnI CCWGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
AjuI GAANNNNNNNTTGG 4 cut(s) 535, 567, 600, 632
AloI GAACNNNNNNTCC 4 cut(s) 137, 169, 1678, 1710
AluBI AGCT 6 cut(s) 806, 908, 1024, 1087, 1190, 1598
AluI AGCT 6 cut(s) 806, 908, 1024, 1087, 1190, 1598
Alw21I GWGCWC 2 cut(s) 1035, 1533
Alw26I GTCTC 4 cut(s) 48, 860, 893, 1725
Alw44I GTGCAC 1 cut(s) 1031
AlwI GGATC 4 cut(s) 1076, 1091, 1104, 1654
Aor51HI AGCGCT 1 cut(s) 1169
AoxI GGCC 3 cut(s) 491, 1646, 1688
ApaLI GTGCAC 1 cut(s) 1031
ApeKI GCWGC 3 cut(s) 202, 221, 1556
ApoI RAATTY 8 cut(s) 21, 170, 571, 595, 614, 817, 1107, 1247
ArsI GACNNNNNNTTYG 2 cut(s) 280, 312
Asp700I GAANNNNTTC 2 cut(s) 25, 121
AspLEI GCGC 5 cut(s) 1005, 1170, 1491, 1639, 1674
AspS9I GGNCC 3 cut(s) 485, 547, 1405
AsuHPI GGTGA 4 cut(s) 269, 349, 360, 1697
AsuII TTCGAA 1 cut(s) 125
AsuNHI GCTAGC 1 cut(s) 373
AvaII GGWCC 3 cut(s) 485, 547, 1405
BaeGI GKGCMC 1 cut(s) 1035
BamHI GGATCC 1 cut(s) 1096
BanI GGYRCC 2 cut(s) 1636, 1671
BarI GAAGNNNNNNTAC 2 cut(s) 495, 527
BbsI GAAGAC 1 cut(s) 267
Bbv12I GWGCWC 2 cut(s) 1035, 1533
BbvCI CCTCAGC 1 cut(s) 1191
BbvI GCAGC 3 cut(s) 189, 208, 1543
BccI CCATC 4 cut(s) 228, 989, 1067, 1588
BceAI ACGGC 3 cut(s) 506, 1458, 1650
BciT130I CCWGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
BcoDI GTCTC 4 cut(s) 48, 860, 893, 1725
BfaI CTAG 3 cut(s) 374, 1028, 1155
BfmI CTRYAG 1 cut(s) 6
BfoI RGCGCY 3 cut(s) 1171, 1640, 1675
BglI GCCNNNNNGGC 1 cut(s) 1645
BisI GCNGC 3 cut(s) 203, 222, 1557
BlsI GCNGC 3 cut(s) 204, 223, 1558
Bme1390I CCNGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
Bme18I GGWCC 3 cut(s) 485, 547, 1405
BmgT120I GGNCC 3 cut(s) 485, 547, 1405
BmiI GGNNCC 7 cut(s) 549, 1098, 1406, 1539, 1638, 1673, 1696
BmrFI CCNGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
BmrI ACTGGG 1 cut(s) 1017
BmsI GCATC 5 cut(s) 81, 87, 285, 439, 809
BmtI GCTAGC 1 cut(s) 377
BmuI ACTGGG 1 cut(s) 1017
BpiI GAAGAC 1 cut(s) 267
BpmI CTGGAG 1 cut(s) 1103
Bpu10I CCTNAGC 2 cut(s) 1020, 1191
Bpu14I TTCGAA 1 cut(s) 125
BpuEI CTTGAG 1 cut(s) 119
Bsa29I ATCGAT 1 cut(s) 1071
BsaHI GRCGYC 3 cut(s) 1637, 1672, 1702
BsaI GGTCTC 1 cut(s) 48
BsaJI CCNNGG 8 cut(s) 333, 425, 488, 725, 839, 861, 1401, 1667
BsaWI WCCGGW 1 cut(s) 1721
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 406, 436, 1678, 1708
Bse1I ACTGG 9 cut(s) 487, 500, 936, 1012, 1086, 1460, 1616, 1625, 1649
BseBI CCWGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
BseCI ATCGAT 1 cut(s) 1071
BseDI CCNNGG 8 cut(s) 333, 425, 488, 725, 839, 861, 1401, 1667
BseGI GGATG 6 cut(s) 239, 430, 757, 763, 1000, 1325
BseMII CTCAG 3 cut(s) 639, 1182, 1272
BseNI ACTGG 9 cut(s) 487, 500, 936, 1012, 1086, 1460, 1616, 1625, 1649
BseRI GAGGAG 4 cut(s) 378, 381, 911, 1530
BseSI GKGCMC 1 cut(s) 1035
BseXI GCAGC 3 cut(s) 189, 208, 1543
BsgI GTGCAG 1 cut(s) 96
BshFI GGCC 3 cut(s) 493, 1648, 1690
BshNI GGYRCC 2 cut(s) 1636, 1671
BshVI ATCGAT 1 cut(s) 1071
BsiHKAI GWGCWC 2 cut(s) 1035, 1533
BsiSI CCGG 2 cut(s) 1675, 1722
BslFI GGGAC 3 cut(s) 533, 1328, 1418
BsmAI GTCTC 4 cut(s) 48, 860, 893, 1725
BsmFI GGGAC 3 cut(s) 533, 1328, 1418
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 3 cut(s) 493, 1648, 1690
Bso31I GGTCTC 1 cut(s) 48
Bsp119I TTCGAA 1 cut(s) 125
Bsp1286I GDGCHC 2 cut(s) 1035, 1533
Bsp143I GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
BspACI CCGC 6 cut(s) 224, 371, 636, 1054, 1577, 1708
BspANI GGCC 3 cut(s) 493, 1648, 1690
BspCNI CTCAG 3 cut(s) 638, 1183, 1273
BspDI ATCGAT 1 cut(s) 1071
BspLI GGNNCC 7 cut(s) 549, 1098, 1406, 1539, 1638, 1673, 1696
BspOI GCTAGC 1 cut(s) 377
BspPI GGATC 4 cut(s) 1076, 1091, 1104, 1654
BspQI GCTCTTC 1 cut(s) 1566
BspT104I TTCGAA 1 cut(s) 125
BspT107I GGYRCC 2 cut(s) 1636, 1671
BspTNI GGTCTC 1 cut(s) 48
BsrI ACTGG 9 cut(s) 487, 500, 936, 1012, 1086, 1460, 1616, 1625, 1649
BssECI CCNNGG 8 cut(s) 333, 425, 488, 725, 839, 861, 1401, 1667
BssMI GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
BssNI GRCGYC 3 cut(s) 1637, 1672, 1702
BssT1I CCWWGG 2 cut(s) 333, 839
Bst2UI CCWGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
Bst4CI ACNGT 6 cut(s) 308, 871, 923, 967, 1426, 1481
Bst6I CTCTTC 4 cut(s) 423, 470, 1364, 1566
BstACI GRCGYC 3 cut(s) 1637, 1672, 1702
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstBI TTCGAA 1 cut(s) 125
BstC8I GCNNGC 3 cut(s) 283, 375, 1054
BstDEI CTNAG 4 cut(s) 625, 1020, 1191, 1281
BstDSI CCRYGG 1 cut(s) 488
BstF5I GGATG 6 cut(s) 239, 430, 757, 763, 1000, 1325
BstH2I RGCGCY 3 cut(s) 1171, 1640, 1675
BstHHI GCGC 5 cut(s) 1005, 1170, 1491, 1639, 1674
BstKTI GATC 6 cut(s) 165, 1071, 1099, 1390, 1435, 1662
BstMAI GTCTC 4 cut(s) 48, 860, 893, 1725
BstMBI GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
BstMWI GCNNNNNNNGC 7 cut(s) 282, 379, 812, 1030, 1145, 1585, 1645
BstNI CCWGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
BstNSI RCATGY 2 cut(s) 886, 1343
BstSCI CCNGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
BstSFI CTRYAG 1 cut(s) 6
BstSLI GKGCMC 1 cut(s) 1035
BstV1I GCAGC 3 cut(s) 189, 208, 1543
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 2 cut(s) 1096, 1659
BstYI RGATCY 2 cut(s) 1096, 1659
Bsu15I ATCGAT 1 cut(s) 1071
BsuRI GGCC 3 cut(s) 493, 1648, 1690
BsuTUI ATCGAT 1 cut(s) 1071
BtgI CCRYGG 1 cut(s) 488
BtgZI GCGATG 1 cut(s) 262
BtsCI GGATG 6 cut(s) 239, 430, 757, 763, 1000, 1325
BtsI GCAGTG 2 cut(s) 785, 1583
BtsIMutI CAGTG 5 cut(s) 313, 785, 1005, 1583, 1734
Cac8I GCNNGC 3 cut(s) 283, 375, 1054
CfoI GCGC 5 cut(s) 1005, 1170, 1491, 1639, 1674
Cfr13I GGNCC 3 cut(s) 485, 547, 1405
ClaI ATCGAT 1 cut(s) 1071
CviAII CATG 6 cut(s) 435, 767, 785, 883, 1340, 1534
DdeI CTNAG 4 cut(s) 625, 1020, 1191, 1281
DinI GGCGCC 2 cut(s) 1638, 1673
DpnI GATC 6 cut(s) 164, 1070, 1098, 1389, 1434, 1661
DpnII GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
Eam1104I CTCTTC 4 cut(s) 423, 470, 1364, 1566
EarI CTCTTC 4 cut(s) 423, 470, 1364, 1566
EciI GGCGGA 1 cut(s) 651
Eco130I CCWWGG 2 cut(s) 333, 839
Eco147I AGGCCT 1 cut(s) 1690
Eco31I GGTCTC 1 cut(s) 48
Eco32I GATATC 1 cut(s) 641
Eco47I GGWCC 3 cut(s) 485, 547, 1405
Eco47III AGCGCT 1 cut(s) 1169
Eco57I CTGAAG 1 cut(s) 935
EcoO109I RGGNCCY 1 cut(s) 547
EcoRI GAATTC 1 cut(s) 21
EcoRII CCWGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
EcoRV GATATC 1 cut(s) 641
EcoT14I CCWWGG 2 cut(s) 333, 839
EgeI GGCGCC 2 cut(s) 1638, 1673
EheI GGCGCC 2 cut(s) 1638, 1673
ErhI CCWWGG 2 cut(s) 333, 839
FaeI CATG 6 cut(s) 438, 770, 788, 886, 1343, 1537
FaqI GGGAC 3 cut(s) 533, 1328, 1418
FatI CATG 6 cut(s) 434, 766, 784, 882, 1339, 1533
FauI CCCGC 1 cut(s) 1061
FauNDI CATATG 1 cut(s) 670
Fnu4HI GCNGC 3 cut(s) 203, 222, 1557
FokI GGATG 6 cut(s) 246, 417, 764, 770, 1007, 1332
Fsp4HI GCNGC 3 cut(s) 203, 222, 1557
FspBI CTAG 3 cut(s) 374, 1028, 1155
GlaI GCGC 5 cut(s) 1004, 1169, 1490, 1638, 1673
GluI GCNGC 3 cut(s) 203, 222, 1557
GsuI CTGGAG 1 cut(s) 1103
HaeII RGCGCY 3 cut(s) 1171, 1640, 1675
HaeIII GGCC 3 cut(s) 493, 1648, 1690
HapII CCGG 2 cut(s) 1675, 1722
HhaI GCGC 5 cut(s) 1005, 1170, 1491, 1639, 1674
Hin1I GRCGYC 3 cut(s) 1637, 1672, 1702
Hin1II CATG 6 cut(s) 438, 770, 788, 886, 1343, 1537
Hin6I GCGC 5 cut(s) 1003, 1168, 1489, 1637, 1672
HinP1I GCGC 5 cut(s) 1003, 1168, 1489, 1637, 1672
HindIII AAGCTT 1 cut(s) 906
HinfI GANTC 6 cut(s) 263, 322, 329, 665, 683, 1015
HpaII CCGG 2 cut(s) 1675, 1722
HphI GGTGA 4 cut(s) 269, 349, 360, 1697
Hpy166II GTNNAC 4 cut(s) 722, 929, 1033, 1182
Hpy188I TCNGA 7 cut(s) 183, 233, 628, 915, 1282, 1430, 1506
Hpy188III TCNNGA 7 cut(s) 47, 326, 603, 1112, 1155, 1313, 1698
Hpy8I GTNNAC 4 cut(s) 722, 929, 1033, 1182
HpyAV CCTTC 7 cut(s) 132, 136, 266, 561, 993, 1256, 1310
HpyCH4III ACNGT 6 cut(s) 308, 871, 923, 967, 1426, 1481
HpyCH4IV ACGT 1 cut(s) 1702
HpyCH4V TGCA 8 cut(s) 113, 168, 697, 800, 815, 1033, 1139, 1148
HpyF10VI GCNNNNNNNGC 7 cut(s) 282, 379, 812, 1030, 1145, 1585, 1645
HpyF3I CTNAG 4 cut(s) 625, 1020, 1191, 1281
HpySE526I ACGT 1 cut(s) 1702
Hsp92I GRCGYC 3 cut(s) 1637, 1672, 1702
Hsp92II CATG 6 cut(s) 438, 770, 788, 886, 1343, 1537
HspAI GCGC 5 cut(s) 1003, 1168, 1489, 1637, 1672
KasI GGCGCC 2 cut(s) 1636, 1671
Kzo9I GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
LguI GCTCTTC 1 cut(s) 1566
LmnI GCTCC 5 cut(s) 775, 1029, 1084, 1336, 1543
Lsp1109I GCAGC 3 cut(s) 189, 208, 1543
LweI GCATC 5 cut(s) 81, 87, 285, 439, 809
MaeI CTAG 3 cut(s) 374, 1028, 1155
MaeII ACGT 1 cut(s) 1702
MaeIII GTNAC 2 cut(s) 356, 1703
MalI GATC 6 cut(s) 164, 1070, 1098, 1389, 1434, 1661
MboI GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
MflI RGATCY 2 cut(s) 1096, 1659
MhlI GDGCHC 2 cut(s) 1035, 1533
Mly113I GGCGCC 2 cut(s) 1637, 1672
MlyI GAGTC 2 cut(s) 257, 692
MmeI TCCRAC 3 cut(s) 161, 229, 1687
MroXI GAANNNNTTC 2 cut(s) 25, 121
MseI TTAA 6 cut(s) 84, 300, 317, 536, 567, 1601
MslI CAYNNNNRTG 1 cut(s) 1518
MspI CCGG 2 cut(s) 1675, 1722
MspR9I CCNGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
MwoI GCNNNNNNNGC 7 cut(s) 282, 379, 812, 1030, 1145, 1585, 1645
NarI GGCGCC 2 cut(s) 1637, 1672
NdeI CATATG 1 cut(s) 670
NdeII GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
NheI GCTAGC 1 cut(s) 373
NlaIII CATG 6 cut(s) 438, 770, 788, 886, 1343, 1537
NlaIV GGNNCC 7 cut(s) 549, 1098, 1406, 1539, 1638, 1673, 1696
NmuCI GTSAC 1 cut(s) 1703
NspI RCATGY 2 cut(s) 886, 1343
NspV TTCGAA 1 cut(s) 125
PceI AGGCCT 1 cut(s) 1690
PciI ACATGT 1 cut(s) 882
PciSI GCTCTTC 1 cut(s) 1566
PctI GAATGC 1 cut(s) 1141
PdmI GAANNNNTTC 2 cut(s) 25, 121
PfeI GAWTC 4 cut(s) 322, 329, 665, 1015
PflFI GACNNNGTC 1 cut(s) 308
PkrI GCNGC 3 cut(s) 204, 223, 1558
PleI GAGTC 2 cut(s) 257, 691
PluTI GGCGCC 2 cut(s) 1640, 1675
PpsI GAGTC 2 cut(s) 257, 691
PpuMI RGGWCCY 1 cut(s) 547
PscI ACATGT 1 cut(s) 882
PsiI TTATAA 1 cut(s) 1164
Psp5II RGGWCCY 1 cut(s) 547
Psp6I CCWGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
PspGI CCWGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
PspN4I GGNNCC 7 cut(s) 549, 1098, 1406, 1539, 1638, 1673, 1696
PspPI GGNCC 3 cut(s) 485, 547, 1405
PspPPI RGGWCCY 1 cut(s) 547
PsuI RGATCY 2 cut(s) 1096, 1659
PsyI GACNNNGTC 1 cut(s) 308
RseI CAYNNNNRTG 1 cut(s) 1518
SapI GCTCTTC 1 cut(s) 1566
SaqAI TTAA 6 cut(s) 84, 300, 317, 536, 567, 1601
SatI GCNGC 3 cut(s) 203, 222, 1557
Sau3AI GATC 6 cut(s) 162, 1068, 1096, 1387, 1432, 1659
Sau96I GGNCC 3 cut(s) 485, 547, 1405
SchI GAGTC 2 cut(s) 257, 692
ScrFI CCNGG 6 cut(s) 426, 726, 862, 1402, 1668, 1692
SduI GDGCHC 2 cut(s) 1035, 1533
SfaNI GCATC 5 cut(s) 81, 87, 285, 439, 809
SfcI CTRYAG 1 cut(s) 6
SfoI GGCGCC 2 cut(s) 1638, 1673
SfuI TTCGAA 1 cut(s) 125
SinI GGWCC 3 cut(s) 485, 547, 1405
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
SseBI AGGCCT 1 cut(s) 1690
SsiI CCGC 6 cut(s) 224, 371, 636, 1054, 1577, 1708
SspDI GGCGCC 2 cut(s) 1636, 1671
SspMI CTAG 3 cut(s) 374, 1028, 1155
StuI AGGCCT 1 cut(s) 1690
StyD4I CCNGG 6 cut(s) 424, 724, 860, 1400, 1666, 1690
StyI CCWWGG 2 cut(s) 333, 839
TaaI ACNGT 6 cut(s) 308, 871, 923, 967, 1426, 1481
TaiI ACGT 1 cut(s) 1705
TaqI TCGA 3 cut(s) 125, 161, 1071
TfiI GAWTC 4 cut(s) 322, 329, 665, 1015
Tru1I TTAA 6 cut(s) 84, 300, 317, 536, 567, 1601
Tru9I TTAA 6 cut(s) 84, 300, 317, 536, 567, 1601
TscAI CASTG 5 cut(s) 313, 785, 1012, 1590, 1741
TseFI GTSAC 1 cut(s) 1703
TseI GCWGC 3 cut(s) 202, 221, 1556
Tsp45I GTSAC 1 cut(s) 1703
TspDTI ATGAA 6 cut(s) 543, 603, 657, 965, 1395, 1623
TspGWI ACGGA 3 cut(s) 105, 1007, 1199
TspRI CASTG 5 cut(s) 313, 785, 1012, 1590, 1741
Tth111I GACNNNGTC 1 cut(s) 308
VneI GTGCAC 1 cut(s) 1031
VpaK11BI GGWCC 3 cut(s) 485, 547, 1405
XapI RAATTY 8 cut(s) 21, 170, 571, 595, 614, 817, 1107, 1247
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 2 cut(s) 886, 1343
XmnI GAANNNNTTC 2 cut(s) 25, 121
XspI CTAG 3 cut(s) 374, 1028, 1155
ZraI GACGTC 1 cut(s) 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.