Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004638

Physical Location & Seq

Genomic Coordinates Reverse (-)

3986301 .. 3989755

Gene Structure 3455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G004820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGAGAGCAGCTTAGAGCAGACTCTTCAAGATGCCAAGCTCTACAGAGAGCTCAATTCTCTCATTGTTGCCTACCTCCGTGACAATAATCTTCACCAGGCTGCAAGTGCTGTTGCTTCAGCAACAATGACATCACTGAATGTCGAAATCCCGGCTAATAAGCTTGTTCAGCTGGTTGCTAAGGGCCTTGCAGTGGAGAAAGATGAGGTGATAAGGGGGTTTTCTTCTCTTGCTAATGATTTGGGTACACTGATACCTTCGGGATATGGTTCAATGCCGGCTCTTCATACTGCCTCGGTTGATTTTGGTGCTGTCCAGGAAACAAAAGGCTCGTCAAAGAGTTTCCCAAAGCATGAGACACGCCATCTTTCGGAGCACAAGAATATTGCCAGATGTGCAAGGTTTAGTCCTGATGGGAAGTTTGTTGCGACTGGAAGTTCAGACACGTCAATAAAGCTATTTGAGGTGGCAAAAGTTAAGCAAATGATGCTTCCAGAGGCAAGAGATGGTCCTGTGCGACCTGTCATACGTACATTCTATGACCACCTACAACCCATAAATGATTTGGATTTCCATCCTCAGAGCTCTATTCTTATATCTGGAGCAAAAGATAACACAATAAAGTTCTTTGATTATTCCAAAATGACTGCAAAGAGAGCATTCAGAGTTATCCAGGATACACACAATGTGCGTTCAGTAGCATTTCATCCTTCTGGGGAGTTTCTTTTAGCTGGGACTGATCATCCAATTCCACACTTATATGATATCAATACCTTCCAGTGTTACCTATCTGCAAATGCCCCAGAAATTGATGTTAATGGAGCAATAAATCAGGTCAGGTATTCAGCTACCGGTGGCATGTATGTTACAGCTTCTAAAGATGGTGCTATTCGCTTATGGGATGGTGTTACTGCCAGTTGTGTACGTTCCATAGTTGGTGCACATGGCACAGCAGAGGCAACCAGTGCAAATTTTACCAAGGACGAAAGGTTTGTTCTCTCTTCTGGAAAGGATTCTACTGTGAAGCTTTGGGAAGTTGGCACTGGAAAATTGGTTAAACAATATCTAGGAGCTACACATACACAATTAAGATGTCAGGCTGTTTTTAATAATACGGAGGAATTTGTACTGTCCATGGATGAACCAAGCAATGAGATTGTTATCTGGGATGCTCTGACAGCAGAAGTAGTAGCAAGGTGGCCATCCAATCATATTGGTGCTTTCCGCTGGCTCGAGCACTCACCAACTGAAGCCGCATTTGTTTCCTGTGGGACTGACAGATCAATACGGTTCTGGAAGGAAGGCGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Mito_carr WD40

Protein Analysis

436

Amino Acids

47.9

Weight (kDa)

6.44

Isoelectric Point (pI)

37.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_2nd	PF25172	101 - 301	3e-12	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	119 - 173	6.4e-06	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	119 - 265	2.9e-14	WDR3 first beta-propeller domain
WD40	PF00400	120 - 154	1.4e-06	WD domain, G-beta repeat
WD40_Gbeta	PF25391	120 - 345	6.9e-14	G protein beta WD-40 repeat protein
Beta-prop_CAF1B_HIR1	PF24105	121 - 264	9.3e-12	CAF1B/HIR1 beta-propeller domain
NBCH_WD40	PF20426	123 - 348	5.2e-09	Neurobeachin beta propeller domain
Beta-prop_WDR5	PF25175	123 - 433	1.6e-51	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	124 - 311	8.9e-17	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	126 - 403	7.8e-33	THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	172 - 243	8.1e-08	WDR36/Utp21 second beta-propeller domain
WD40_Prp19	PF24814	175 - 316	2.7e-18	Prp19 WD40 domain
WD40	PF00400	175 - 211	3.2e-07	WD domain, G-beta repeat
EIF3I	PF24805	178 - 371	9.1e-14	EIF3I
WDR55	PF24796	184 - 389	1.2e-14	WDR55
WD40_CDC20-Fz	PF24807	185 - 432	1.8e-19	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	189 - 354	9.7e-15	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd	PF25047	195 - 432	1e-10	TEP-1 second beta-propeller
Beta-prop_WDR3_1st	PF25173	219 - 367	4e-16	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	265 - 358	9.5e-09	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	321 - 434	2.1e-08	WDR3 second beta-propeller domain
WD40_Prp19	PF24814	327 - 432	5.2e-07	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60940 AT5G60940
fragaria_vesca	FvH4_5g13570 FvH4_5g13570 FvH4_5g13570 FvH4_5g13570
malus_domestica	MD06G1203600.v1.1
prunus_persica	Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1 Prupe.5G207700_v2.0.a1
pyrus_communis	pycom06g18170
rosa_chinensis	RchiOBHm_Chr7g0183371
rosa_laevigata	RLG00000005052
rosa_multiflora	Rmu_sc0000951.1_g000013 Rmu_sc0034749.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270500
rosa_rugosa	Rorug06G0457100 Rorug06G0457200 Rorug06G0457300 Rorug06G0457400 Rorug06G0457500
rosa_samantha	Rh7AG058600 Rh7BG058600 Rh7CG060200 Rh7DG058300
rosa_wichuraiana	Rw7G004820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	1225, 1254
AcoI	YGGCCR	1 cut(s)	1199
AcsI	RAATTY	2 cut(s)	970, 1121
AcuI	CTGAAG	2 cut(s)	102, 1269
AdeI	CACNNNGTG	1 cut(s)	688
AfaI	GTAC	4 cut(s)	247, 532, 924, 1128
AfiI	CCNNNNNNNGG	2 cut(s)	193, 370
AflIII	ACRYGT	1 cut(s)	444
AgeI	ACCGGT	1 cut(s)	851
AgsI	TTSAA	2 cut(s)	29, 273
AjiI	CACGTC	1 cut(s)	447
AjnI	CCWGG	3 cut(s)	96, 315, 672
Alw21I	GWGCWC	5 cut(s)	54, 378, 587, 943, 1239
Alw26I	GTCTC	1 cut(s)	350
Alw44I	GTGCAC	1 cut(s)	939
Ama87I	CYCGRG	1 cut(s)	1232
AoxI	GGCC	2 cut(s)	184, 1199
ApaLI	GTGCAC	1 cut(s)	939
ApeKI	GCWGC	2 cut(s)	9, 101
ApoI	RAATTY	2 cut(s)	970, 1121
ArsI	GACNNNNNNTTYG	4 cut(s)	317, 349, 974, 1006
AsiGI	ACCGGT	1 cut(s)	851
Asp700I	GAANNNNTTC	1 cut(s)	1012
AspS9I	GGNCC	2 cut(s)	184, 509
AsuC2I	CCSGG	1 cut(s)	152
AsuHPI	GGTGA	3 cut(s)	86, 220, 1233
AvaI	CYCGRG	1 cut(s)	1232
AvaII	GGWCC	1 cut(s)	509
BaeGI	GKGCMC	1 cut(s)	943
BalI	TGGCCA	1 cut(s)	1201
BanII	GRGCYC	2 cut(s)	54, 587
Bbv12I	GWGCWC	5 cut(s)	54, 378, 587, 943, 1239
BbvI	GCAGC	2 cut(s)	21, 88
BccI	CCATC	7 cut(s)	372, 407, 500, 582, 875, 896, 1210
BciT130I	CCWGG	3 cut(s)	98, 317, 674
BciVI	GTATCC	1 cut(s)	670
BclI	TGATCA	1 cut(s)	739
BcnI	CCSGG	1 cut(s)	152
BcoDI	GTCTC	1 cut(s)	350
BfaI	CTAG	1 cut(s)	1067
BfmI	CTRYAG	1 cut(s)	43
BfuI	GTATCC	1 cut(s)	670
BisI	GCNGC	3 cut(s)	10, 102, 1254
BlsI	GCNGC	3 cut(s)	11, 103, 1255
Bme1390I	CCNGG	4 cut(s)	98, 152, 317, 674
Bme18I	GGWCC	1 cut(s)	509
BmeT110I	CYCGRG	1 cut(s)	1232
BmgBI	CACGTC	1 cut(s)	447
BmgT120I	GGNCC	2 cut(s)	184, 509
BmrFI	CCNGG	4 cut(s)	98, 152, 317, 674
BmsI	GCATC	3 cut(s)	22, 477, 1159
BpmI	CTGGAG	1 cut(s)	621
Bpu10I	CCTNAGC	1 cut(s)	180
BpuMI	CCSGG	1 cut(s)	152
BsaAI	YACGTR	1 cut(s)	530
BsaBI	GATNNNNATC	2 cut(s)	573, 1160
BsaJI	CCNNGG	3 cut(s)	294, 978, 1134
BsaWI	WCCGGW	1 cut(s)	851
Bsc4I	CCNNNNNNNGG	2 cut(s)	193, 370
Bse118I	RCCGGY	2 cut(s)	277, 851
Bse1I	ACTGG	5 cut(s)	436, 778, 915, 963, 1048
Bse3DI	GCAATG	1 cut(s)	1156
Bse8I	GATNNNNATC	2 cut(s)	573, 1160
BseBI	CCWGG	3 cut(s)	98, 317, 674
BseDI	CCNNGG	3 cut(s)	294, 978, 1134
BseGI	GGATG	7 cut(s)	574, 706, 742, 907, 1144, 1174, 1202
BseJI	GATNNNNATC	2 cut(s)	573, 1160
BseLI	CCNNNNNNNGG	2 cut(s)	193, 370
BseMI	GCAATG	1 cut(s)	1156
BseMII	CTCAG	1 cut(s)	593
BseNI	ACTGG	5 cut(s)	436, 778, 915, 963, 1048
BseSI	GKGCMC	1 cut(s)	943
BseXI	GCAGC	2 cut(s)	21, 88
BseYI	CCCAGC	1 cut(s)	731
BshFI	GGCC	2 cut(s)	186, 1201
BshTI	ACCGGT	1 cut(s)	851
BsiHKAI	GWGCWC	5 cut(s)	54, 378, 587, 943, 1239
BsiHKCI	CYCGRG	1 cut(s)	1232
BsiSI	CCGG	3 cut(s)	152, 278, 852
BslFI	GGGAC	2 cut(s)	748, 1285
BslI	CCNNNNNNNGG	2 cut(s)	193, 370
BsmAI	GTCTC	1 cut(s)	350
BsmFI	GGGAC	2 cut(s)	748, 1285
BsmI	GAATGC	1 cut(s)	659
BsnI	GGCC	2 cut(s)	186, 1201
BsoBI	CYCGRG	1 cut(s)	1232
Bsp1286I	GDGCHC	5 cut(s)	54, 378, 587, 943, 1239
Bsp143I	GATC	2 cut(s)	739, 1280
Bsp19I	CCATGG	1 cut(s)	1134
BspACI	CCGC	2 cut(s)	1225, 1254
BspANI	GGCC	2 cut(s)	186, 1201
BspCNI	CTCAG	1 cut(s)	592
BspQI	GCTCTTC	1 cut(s)	288
BsrDI	GCAATG	1 cut(s)	1156
BsrFI	RCCGGY	2 cut(s)	277, 851
BsrI	ACTGG	5 cut(s)	436, 778, 915, 963, 1048
BssAI	RCCGGY	2 cut(s)	277, 851
BssECI	CCNNGG	3 cut(s)	294, 978, 1134
BssMI	GATC	2 cut(s)	739, 1280
BssT1I	CCWWGG	2 cut(s)	978, 1134
Bst2UI	CCWGG	3 cut(s)	98, 317, 674
Bst4CI	ACNGT	3 cut(s)	1021, 1131, 1290
Bst6I	CTCTTC	3 cut(s)	30, 288, 1006
BstAPI	GCANNNNNTGC	2 cut(s)	487, 965
BstBAI	YACGTR	1 cut(s)	530
BstC8I	GCNNGC	2 cut(s)	279, 1229
BstDEI	CTNAG	3 cut(s)	13, 180, 579
BstDSI	CCRYGG	1 cut(s)	1134
BstF5I	GGATG	7 cut(s)	574, 706, 742, 907, 1144, 1174, 1202
BstKTI	GATC	2 cut(s)	742, 1283
BstMAI	GTCTC	1 cut(s)	350
BstMBI	GATC	2 cut(s)	739, 1280
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 169, 395, 487, 656, 965, 1178
BstNI	CCWGG	3 cut(s)	98, 317, 674
BstNSI	RCATGY	1 cut(s)	862
BstSCI	CCNGG	4 cut(s)	96, 150, 315, 672
BstSFI	CTRYAG	1 cut(s)	43
BstSLI	GKGCMC	1 cut(s)	943
BstSNI	TACGTA	1 cut(s)	530
BstV1I	GCAGC	2 cut(s)	21, 88
BsuI	GTATCC	1 cut(s)	670
BsuRI	GGCC	2 cut(s)	186, 1201
BtgI	CCRYGG	1 cut(s)	1134
BtrI	CACGTC	1 cut(s)	447
BtsCI	GGATG	7 cut(s)	574, 706, 742, 907, 1144, 1174, 1202
BtsI	GCAGTG	1 cut(s)	198
BtsIMutI	CAGTG	6 cut(s)	134, 198, 248, 785, 970, 1041
Cac8I	GCNNGC	2 cut(s)	279, 1229
Cfr10I	RCCGGY	2 cut(s)	277, 851
Cfr13I	GGNCC	2 cut(s)	184, 509
Csp6I	GTAC	4 cut(s)	246, 531, 923, 1127
CspAI	ACCGGT	1 cut(s)	851
CviAII	CATG	4 cut(s)	353, 859, 944, 1135
CviQI	GTAC	4 cut(s)	246, 531, 923, 1127
DdeI	CTNAG	3 cut(s)	13, 180, 579
DpnI	GATC	2 cut(s)	741, 1282
DpnII	GATC	2 cut(s)	739, 1280
DraIII	CACNNNGTG	1 cut(s)	688
EaeI	YGGCCR	1 cut(s)	1199
Eam1104I	CTCTTC	3 cut(s)	30, 288, 1006
EarI	CTCTTC	3 cut(s)	30, 288, 1006
Ecl136II	GAGCTC	2 cut(s)	52, 585
Eco105I	TACGTA	1 cut(s)	530
Eco130I	CCWWGG	2 cut(s)	978, 1134
Eco24I	GRGCYC	2 cut(s)	54, 587
Eco32I	GATATC	1 cut(s)	766
Eco47I	GGWCC	1 cut(s)	509
Eco53kI	GAGCTC	2 cut(s)	52, 585
Eco57I	CTGAAG	2 cut(s)	102, 1269
Eco88I	CYCGRG	1 cut(s)	1232
EcoICRI	GAGCTC	2 cut(s)	52, 585
EcoO109I	RGGNCCY	1 cut(s)	184
EcoRII	CCWGG	3 cut(s)	96, 315, 672
EcoRV	GATATC	1 cut(s)	766
EcoT14I	CCWWGG	2 cut(s)	978, 1134
EcoT38I	GRGCYC	2 cut(s)	54, 587
ErhI	CCWWGG	2 cut(s)	978, 1134
FaeI	CATG	4 cut(s)	356, 862, 947, 1138
FaqI	GGGAC	2 cut(s)	748, 1285
FatI	CATG	4 cut(s)	352, 858, 943, 1134
FbaI	TGATCA	1 cut(s)	739
Fnu4HI	GCNGC	3 cut(s)	10, 102, 1254
FokI	GGATG	7 cut(s)	561, 693, 729, 914, 1151, 1181, 1189
FriOI	GRGCYC	2 cut(s)	54, 587
Fsp4HI	GCNGC	3 cut(s)	10, 102, 1254
FspBI	CTAG	1 cut(s)	1067
GluI	GCNGC	3 cut(s)	10, 102, 1254
GsaI	CCCAGC	1 cut(s)	735
GsuI	CTGGAG	1 cut(s)	621
HaeIII	GGCC	2 cut(s)	186, 1201
HapII	CCGG	3 cut(s)	152, 278, 852
Hin1II	CATG	4 cut(s)	356, 862, 947, 1138
HindIII	AAGCTT	2 cut(s)	161, 1025
HinfI	GANTC	2 cut(s)	22, 1013
HpaII	CCGG	3 cut(s)	152, 278, 852
HphI	GGTGA	3 cut(s)	86, 220, 1233
Hpy166II	GTNNAC	3 cut(s)	248, 923, 941
Hpy188I	TCNGA	5 cut(s)	373, 442, 582, 665, 1176
Hpy188III	TCNNGA	7 cut(s)	29, 261, 410, 494, 600, 1005, 1294
Hpy8I	GTNNAC	3 cut(s)	248, 923, 941
HpyAV	CCTTC	5 cut(s)	267, 720, 784, 1291, 1295
HpyCH4III	ACNGT	3 cut(s)	1021, 1131, 1290
HpyCH4IV	ACGT	3 cut(s)	446, 529, 925
HpyCH4V	TGCA	7 cut(s)	104, 191, 398, 650, 794, 941, 968
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 169, 395, 487, 656, 965, 1178
HpyF3I	CTNAG	3 cut(s)	13, 180, 579
HpySE526I	ACGT	3 cut(s)	446, 529, 925
Hsp92II	CATG	4 cut(s)	356, 862, 947, 1138
KroI	GCCGGC	1 cut(s)	277
KroNI	GCCGGC	1 cut(s)	279
Ksp22I	TGATCA	1 cut(s)	739
Kzo9I	GATC	2 cut(s)	739, 1280
LguI	GCTCTTC	1 cut(s)	288
LmnI	GCTCC	4 cut(s)	373, 602, 821, 1070
Lsp1109I	GCAGC	2 cut(s)	21, 88
LweI	GCATC	3 cut(s)	22, 477, 1159
MaeI	CTAG	1 cut(s)	1067
MaeII	ACGT	3 cut(s)	446, 529, 925
MaeIII	GTNAC	4 cut(s)	80, 782, 865, 907
MalI	GATC	2 cut(s)	741, 1282
MboI	GATC	2 cut(s)	739, 1280
MboII	GAAGA	5 cut(s)	17, 83, 216, 275, 993
MhlI	GDGCHC	5 cut(s)	54, 378, 587, 943, 1239
MlsI	TGGCCA	1 cut(s)	1201
MluCI	AATT	7 cut(s)	55, 747, 807, 970, 1049, 1085, 1121
MluNI	TGGCCA	1 cut(s)	1201
MlyI	GAGTC	1 cut(s)	16
MnlI	CCTC	8 cut(s)	86, 199, 304, 457, 490, 588, 949, 1111
Mox20I	TGGCCA	1 cut(s)	1201
MroNI	GCCGGC	1 cut(s)	277
MroXI	GAANNNNTTC	1 cut(s)	1012
MscI	TGGCCA	1 cut(s)	1201
MseI	TTAA	5 cut(s)	477, 816, 1056, 1088, 1107
MslI	CAYNNNNRTG	2 cut(s)	759, 1215
Msp20I	TGGCCA	1 cut(s)	1201
MspA1I	CMGCKG	2 cut(s)	172, 1227
MspI	CCGG	3 cut(s)	152, 278, 852
MspR9I	CCNGG	4 cut(s)	98, 152, 317, 674
Mva1269I	GAATGC	1 cut(s)	659
MvaI	CCWGG	3 cut(s)	98, 317, 674
MwoI	GCNNNNNNNGC	7 cut(s)	107, 169, 395, 487, 656, 965, 1178
NaeI	GCCGGC	1 cut(s)	279
NciI	CCSGG	1 cut(s)	152
NcoI	CCATGG	1 cut(s)	1134
NdeII	GATC	2 cut(s)	739, 1280
NgoMIV	GCCGGC	1 cut(s)	277
NlaIII	CATG	4 cut(s)	356, 862, 947, 1138
NmuCI	GTSAC	1 cut(s)	80
NspI	RCATGY	1 cut(s)	862
PaeR7I	CTCGAG	1 cut(s)	1232
PciSI	GCTCTTC	1 cut(s)	288
PctI	GAATGC	1 cut(s)	659
PdiI	GCCGGC	1 cut(s)	279
PdmI	GAANNNNTTC	1 cut(s)	1012
PfeI	GAWTC	1 cut(s)	1013
PfoI	TCCNGGA	2 cut(s)	315, 672
PinAI	ACCGGT	1 cut(s)	851
PkrI	GCNGC	3 cut(s)	11, 103, 1255
PleI	GAGTC	1 cut(s)	16
PpsI	GAGTC	1 cut(s)	16
Ppu21I	YACGTR	1 cut(s)	530
Psp124BI	GAGCTC	2 cut(s)	54, 587
Psp6I	CCWGG	3 cut(s)	96, 315, 672
PspFI	CCCAGC	1 cut(s)	731
PspGI	CCWGG	3 cut(s)	96, 315, 672
PspPI	GGNCC	2 cut(s)	184, 509
PspXI	VCTCGAGB	1 cut(s)	1232
PvuII	CAGCTG	1 cut(s)	172
RsaI	GTAC	4 cut(s)	247, 532, 924, 1128
RsaNI	GTAC	4 cut(s)	246, 531, 923, 1127
RseI	CAYNNNNRTG	2 cut(s)	759, 1215
SacI	GAGCTC	2 cut(s)	54, 587
SapI	GCTCTTC	1 cut(s)	288
SaqAI	TTAA	5 cut(s)	477, 816, 1056, 1088, 1107
SatI	GCNGC	3 cut(s)	10, 102, 1254
Sau3AI	GATC	2 cut(s)	739, 1280
Sau96I	GGNCC	2 cut(s)	184, 509
SchI	GAGTC	1 cut(s)	16
ScrFI	CCNGG	4 cut(s)	98, 152, 317, 674
SduI	GDGCHC	5 cut(s)	54, 378, 587, 943, 1239
SfaNI	GCATC	3 cut(s)	22, 477, 1159
SfcI	CTRYAG	1 cut(s)	43
Sfr274I	CTCGAG	1 cut(s)	1232
SinI	GGWCC	1 cut(s)	509
SlaI	CTCGAG	1 cut(s)	1232
SmiMI	CAYNNNNRTG	2 cut(s)	759, 1215
SmlI	CTYRAG	1 cut(s)	1232
SmoI	CTYRAG	1 cut(s)	1232
SnaBI	TACGTA	1 cut(s)	530
Sse9I	AATT	7 cut(s)	55, 747, 807, 970, 1049, 1085, 1121
SsiI	CCGC	2 cut(s)	1225, 1254
SspI	AATATT	1 cut(s)	385
SspMI	CTAG	1 cut(s)	1067
SstI	GAGCTC	2 cut(s)	54, 587
StyD4I	CCNGG	4 cut(s)	96, 150, 315, 672
StyI	CCWWGG	2 cut(s)	978, 1134
TaaI	ACNGT	3 cut(s)	1021, 1131, 1290
TaiI	ACGT	3 cut(s)	449, 532, 928
TaqI	TCGA	2 cut(s)	144, 1233
TasI	AATT	7 cut(s)	55, 747, 807, 970, 1049, 1085, 1121
TatI	WGTACW	1 cut(s)	1126
TauI	GCSGC	1 cut(s)	1256
TfiI	GAWTC	1 cut(s)	1013
Tru1I	TTAA	5 cut(s)	477, 816, 1056, 1088, 1107
Tru9I	TTAA	5 cut(s)	477, 816, 1056, 1088, 1107
TscAI	CASTG	6 cut(s)	141, 198, 255, 785, 970, 1048
TseFI	GTSAC	1 cut(s)	80
TseI	GCWGC	2 cut(s)	9, 101
Tsp45I	GTSAC	1 cut(s)	80
TspDTI	ATGAA	3 cut(s)	275, 695, 1155
TspGWI	ACGGA	2 cut(s)	68, 1130
TspRI	CASTG	6 cut(s)	141, 198, 255, 785, 970, 1048
VneI	GTGCAC	1 cut(s)	939
VpaK11BI	GGWCC	1 cut(s)	509
XapI	RAATTY	2 cut(s)	970, 1121
XceI	RCATGY	1 cut(s)	862
XcmI	CCANNNNNNNNNTGG	1 cut(s)	562
XhoI	CTCGAG	1 cut(s)	1232
XmnI	GAANNNNTTC	1 cut(s)	1012
XspI	CTAG	1 cut(s)	1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.