Rw7G026980

Cinnamoyl-CoA reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0014331
Physical Location & Seq
Reverse (-)
34482165 .. 34486277
4113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G026980.1

Sequence Viewer

Length: 1032 bp
ATGCAAACAACAACCAGAGAACCAATCTCAATCGGAATGGCTTCTTCCTCATCGGAGGCGGTGTGCGTGACCGGAGGCAACGGCTTCATCGGCTCGTGGCTCGTCAAGACCCTACTGGAGCGCGGCTACACTCGCGTCCACGTCTCCGTCTACCCCGGCTCCGACGCCTCCCACCTCTTCTCCCTCCCCGGCGCCTCCTCCGCCACCCTCGCCGTCTTCGAGGCCGACATCCTCGACGCCGGCGCCGTCGCCAGGGCCGTCGAGAGCTGCAAGGGCGTGTTCCACGTGGCGTCGCCGTGCACCCTCGAGGACCCCAAAGACCCCCAGGCGGAGCTGGTGTCGCCCGCCGTGCAGGGCACCCTCAATGTGCTGCAGGCCGCGGCGAGGTTCGGCGCGAGGCGCGTGGTGCTCACGTCCTCCATCTCGGCCATGGTCCCCAACCCCGGTTGGCCCTCCCACAAGGTCTTCGACGAGACGTCGTGGACCGACCTCGATTACTGCAAATCCCGCCAGAAATGGTATCCCGTGTCAAAGACACTAGCAGAGAAAGCAGCATGGGATTTCGCAGAGAAGAATGGATTGGATGTGGTAGCAATCCATCCAGCCACATGTCTTGGACCTCTTCTGCAGCCTGGTTTGAATGCAAGCTGTGCCGTTCTGCTTAACTTGCTGCAGGGATCCAAAGATACACAAGAGTATCACTGGTTAGGGGCTGTGCATGTCAAAGATGTCGCCAAGGCACAAGTTTTGCTGTTTGAGACTCCTGCGGCTTCTGGAAGGTACCTTTGTACCAATGGTATCTACCAATTCAGTGACTTTGCTGATAGAATCTCCAAACTCTTCCCCCACTTTCCAGTTCACAGGTTTAGTGGGGAAACCCAACCAGGCCTAAAGGATTGCAAGGATGCTGCAAAGAGATTAATCGACCTGGGTCTGGTTTTCGTACCAGTTGAAGATGCTGTTCAGGAAACAGTGGAGAGCCTCAAAGCTAGAGGCTTTTTGAAGCAGGAAGAGACGTCTCAATCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

343

Amino Acids

36.95

Weight (kDa)

6.0

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 21 - 258 3.3e-26 NAD dependent epimerase/dehydratase family
Polysacc_synt_2 PF02719 21 - 148 1.3e-06 Polysaccharide biosynthesis protein
KR PF08659 22 - 149 2.8e-08 KR domain
3Beta_HSD PF01073 23 - 250 1.6e-20 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 23 - 275 9.7e-14 GDP-mannose 4,6 dehydratase
NAD_binding_10 PF13460 25 - 155 3.2e-10 NAD(P)H-binding
NAD_binding_4 PF07993 79 - 206 3.3e-07 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014331)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02400
fragaria_vesca FvH4_5g27181
malus_domestica MD08G1250300.v1.1
prunus_persica Prupe.1G587500_v2.0.a1 Prupe.1G587500_v2.0.a1
pyrus_communis pycom08g21710
rosa_chinensis RchiOBHm_Chr7g0218281
rosa_laevigata RLG00000002382
rosa_multiflora Rmu_co8255051.1_g000001 Rmu_sc0002408.1_g000014 Rmu_sc0004956.1_g000010
rosa_roxburghii Rroxscaffold_3G00241130
rosa_rugosa Rorug07G0176100.1
rosa_samantha Rh7AG317800 Rh7BG309100 Rh7DG316700
rosa_wichuraiana Rw7G026980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 479, 1019
AbsI CCTCGAGG 1 cut(s) 305
Acc65I GGTACC 1 cut(s) 780
AccB1I GGYRCC 4 cut(s) 191, 242, 356, 780
AccI GTMKAC 1 cut(s) 150
AccII CGCG 5 cut(s) 123, 135, 380, 395, 402
AciI CCGC 9 cut(s) 59, 123, 201, 329, 345, 378, 380, 508, 767
AclWI GGATC 2 cut(s) 672, 685
AcoI YGGCCR 1 cut(s) 426
AcvI CACGTG 1 cut(s) 286
AcyI GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
AfaI GTAC 3 cut(s) 782, 790, 945
AfiI CCNNNNNNNGG 5 cut(s) 252, 328, 384, 443, 934
AflIII ACRYGT 1 cut(s) 608
AgsI TTSAA 3 cut(s) 640, 953, 1003
AhdI GACNNNNNGTC 1 cut(s) 475
AjiI CACGTC 2 cut(s) 142, 414
AjnI CCWGG 5 cut(s) 251, 324, 631, 883, 927
AjuI GAANNNNNNNTTGG 2 cut(s) 563, 595
AluBI AGCT 5 cut(s) 267, 334, 648, 989, 1029
AluI AGCT 5 cut(s) 267, 334, 648, 989, 1029
Alw21I GWGCWC 2 cut(s) 302, 411
Alw26I GTCTC 5 cut(s) 148, 467, 752, 1007, 1023
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 2 cut(s) 672, 685
Ama87I CYCGRG 1 cut(s) 305
AoxI GGCC 6 cut(s) 222, 255, 375, 426, 449, 886
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 6 cut(s) 267, 370, 551, 628, 670, 908
AseI ATTAAT 1 cut(s) 920
Asp700I GAANNNNTTC 1 cut(s) 40
Asp718I GGTACC 1 cut(s) 780
AspLEI GCGC 5 cut(s) 123, 194, 245, 395, 402
AspS9I GGNCC 6 cut(s) 255, 310, 433, 450, 483, 617
AsuC2I CCSGG 3 cut(s) 156, 189, 444
AvaI CYCGRG 1 cut(s) 305
AvaII GGWCC 4 cut(s) 310, 433, 483, 617
BaeGI GKGCMC 2 cut(s) 302, 359
BaeI ACNNNNGTAYC 6 cut(s) 680, 713, 772, 772, 805, 805
BamHI GGATCC 1 cut(s) 677
BanI GGYRCC 4 cut(s) 191, 242, 356, 780
BauI CACGAG 1 cut(s) 94
BbrPI CACGTG 1 cut(s) 286
BbsI GAAGAC 2 cut(s) 208, 457
Bbv12I GWGCWC 2 cut(s) 302, 411
BbvI GCAGC 6 cut(s) 254, 357, 563, 640, 657, 895
BccI CCATC 2 cut(s) 428, 606
BceAI ACGGC 7 cut(s) 97, 197, 230, 242, 280, 332, 638
BciT130I CCWGG 5 cut(s) 253, 326, 633, 885, 929
BciVI GTATCC 1 cut(s) 531
BcnI CCSGG 3 cut(s) 156, 189, 444
BcoDI GTCTC 5 cut(s) 148, 467, 752, 1007, 1023
BfaI CTAG 4 cut(s) 539, 990, 1026, 1030
BfmI CTRYAG 3 cut(s) 371, 626, 671
BfoI RGCGCY 2 cut(s) 195, 246
BfuI GTATCC 1 cut(s) 531
Bme1390I CCNGG 8 cut(s) 156, 189, 253, 326, 444, 633, 885, 929
Bme18I GGWCC 4 cut(s) 310, 433, 483, 617
BmeRI GACNNNNNGTC 1 cut(s) 475
BmeT110I CYCGRG 1 cut(s) 305
BmgBI CACGTC 2 cut(s) 142, 414
BmgT120I GGNCC 6 cut(s) 255, 310, 433, 450, 483, 617
BmiI GGNNCC 8 cut(s) 160, 193, 244, 312, 358, 435, 679, 782
BmrFI CCNGG 8 cut(s) 156, 189, 253, 326, 444, 633, 885, 929
BmsI GCATC 2 cut(s) 895, 946
BoxI GACNNNNGTC 1 cut(s) 930
BpiI GAAGAC 2 cut(s) 208, 457
BpmI CTGGAG 1 cut(s) 137
BpuMI CCSGG 3 cut(s) 156, 189, 444
BsaAI YACGTR 1 cut(s) 286
BsaHI GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
BsaJI CCNNGG 9 cut(s) 154, 187, 252, 324, 378, 429, 442, 735, 928
BsaWI WCCGGW 1 cut(s) 71
BsaXI ACNNNNNCTCC 8 cut(s) 47, 77, 143, 164, 173, 194, 323, 353
Bsc4I CCNNNNNNNGG 5 cut(s) 252, 328, 384, 443, 934
Bse118I RCCGGY 1 cut(s) 239
Bse1I ACTGG 4 cut(s) 120, 707, 854, 947
BseBI CCWGG 5 cut(s) 253, 326, 633, 885, 929
BseDI CCNNGG 9 cut(s) 154, 187, 252, 324, 378, 429, 442, 735, 928
BseGI GGATG 4 cut(s) 228, 589, 598, 910
BseLI CCNNNNNNNGG 5 cut(s) 252, 328, 384, 443, 934
BseNI ACTGG 4 cut(s) 120, 707, 854, 947
BseRI GAGGAG 1 cut(s) 187
BseSI GKGCMC 2 cut(s) 302, 359
BseXI GCAGC 6 cut(s) 254, 357, 563, 640, 657, 895
BsgI GTGCAG 1 cut(s) 371
Bsh1236I CGCG 5 cut(s) 123, 135, 380, 395, 402
BshFI GGCC 6 cut(s) 224, 257, 377, 428, 451, 888
BshNI GGYRCC 4 cut(s) 191, 242, 356, 780
BsiHKAI GWGCWC 2 cut(s) 302, 411
BsiHKCI CYCGRG 1 cut(s) 305
BsiSI CCGG 5 cut(s) 72, 156, 189, 240, 444
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 5 cut(s) 252, 328, 384, 443, 934
BsmAI GTCTC 5 cut(s) 148, 467, 752, 1007, 1023
BsmBI CGTCTC 4 cut(s) 148, 467, 1007, 1023
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 646
BsnI GGCC 6 cut(s) 224, 257, 377, 428, 451, 888
BsoBI CYCGRG 1 cut(s) 305
Bsp1286I GDGCHC 3 cut(s) 302, 359, 411
Bsp143I GATC 1 cut(s) 677
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 9 cut(s) 59, 123, 201, 329, 345, 378, 380, 508, 767
BspANI GGCC 6 cut(s) 224, 257, 377, 428, 451, 888
BspFNI CGCG 5 cut(s) 123, 135, 380, 395, 402
BspLI GGNNCC 8 cut(s) 160, 193, 244, 312, 358, 435, 679, 782
BspMAI CTGCAG 3 cut(s) 375, 630, 675
BspPI GGATC 2 cut(s) 672, 685
BspT107I GGYRCC 4 cut(s) 191, 242, 356, 780
BsrFI RCCGGY 1 cut(s) 239
BsrI ACTGG 4 cut(s) 120, 707, 854, 947
BssAI RCCGGY 1 cut(s) 239
BssECI CCNNGG 9 cut(s) 154, 187, 252, 324, 378, 429, 442, 735, 928
BssMI GATC 1 cut(s) 677
BssNI GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
BssSI CACGAG 1 cut(s) 94
BssT1I CCWWGG 2 cut(s) 429, 735
Bst2BI CACGAG 1 cut(s) 94
Bst2UI CCWGG 5 cut(s) 253, 326, 633, 885, 929
Bst4CI ACNGT 1 cut(s) 973
Bst6I CTCTTC 4 cut(s) 182, 627, 845, 1005
BstACI GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
BstAPI GCANNNNNTGC 1 cut(s) 650
BstBAI YACGTR 1 cut(s) 286
BstC8I GCNNGC 4 cut(s) 241, 345, 375, 646
BstDSI CCRYGG 2 cut(s) 378, 429
BstF5I GGATG 4 cut(s) 228, 589, 598, 910
BstFNI CGCG 5 cut(s) 123, 135, 380, 395, 402
BstH2I RGCGCY 2 cut(s) 195, 246
BstHHI GCGC 5 cut(s) 123, 194, 245, 395, 402
BstKTI GATC 1 cut(s) 680
BstMAI GTCTC 5 cut(s) 148, 467, 752, 1007, 1023
BstMBI GATC 1 cut(s) 677
BstNI CCWGG 5 cut(s) 253, 326, 633, 885, 929
BstNSI RCATGY 2 cut(s) 612, 722
BstPAI GACNNNNGTC 1 cut(s) 930
BstSCI CCNGG 8 cut(s) 154, 187, 251, 324, 442, 631, 883, 927
BstSFI CTRYAG 3 cut(s) 371, 626, 671
BstSLI GKGCMC 2 cut(s) 302, 359
BstUI CGCG 5 cut(s) 123, 135, 380, 395, 402
BstV1I GCAGC 6 cut(s) 254, 357, 563, 640, 657, 895
BstV2I GAAGAC 2 cut(s) 208, 457
BstX2I RGATCY 1 cut(s) 677
BstYI RGATCY 1 cut(s) 677
BsuI GTATCC 1 cut(s) 531
BsuRI GGCC 6 cut(s) 224, 257, 377, 428, 451, 888
BtgI CCRYGG 2 cut(s) 378, 429
BtrI CACGTC 2 cut(s) 142, 414
BtsCI GGATG 4 cut(s) 228, 589, 598, 910
BtsIMutI CAGTG 3 cut(s) 700, 817, 978
Cac8I GCNNGC 4 cut(s) 241, 345, 375, 646
CfoI GCGC 5 cut(s) 123, 194, 245, 395, 402
Cfr10I RCCGGY 1 cut(s) 239
Cfr13I GGNCC 6 cut(s) 255, 310, 433, 450, 483, 617
Cfr42I CCGCGG 1 cut(s) 381
CseI GACGC 4 cut(s) 124, 173, 245, 279
Csp6I GTAC 3 cut(s) 781, 789, 944
CspCI CAANNNNNGTGG 2 cut(s) 595, 630
CviAII CATG 4 cut(s) 430, 555, 609, 719
CviQI GTAC 3 cut(s) 781, 789, 944
DinI GGCGCC 2 cut(s) 193, 244
DpnI GATC 1 cut(s) 679
DpnII GATC 1 cut(s) 677
DriI GACNNNNNGTC 1 cut(s) 475
EaeI YGGCCR 1 cut(s) 426
Eam1104I CTCTTC 4 cut(s) 182, 627, 845, 1005
Eam1105I GACNNNNNGTC 1 cut(s) 475
EarI CTCTTC 4 cut(s) 182, 627, 845, 1005
EciI GGCGGA 2 cut(s) 190, 344
Eco130I CCWWGG 2 cut(s) 429, 735
Eco147I AGGCCT 1 cut(s) 888
Eco47I GGWCC 4 cut(s) 310, 433, 483, 617
Eco72I CACGTG 1 cut(s) 286
Eco88I CYCGRG 1 cut(s) 305
EcoO109I RGGNCCY 1 cut(s) 310
EcoRII CCWGG 5 cut(s) 251, 324, 631, 883, 927
EcoT14I CCWWGG 2 cut(s) 429, 735
EgeI GGCGCC 2 cut(s) 193, 244
EheI GGCGCC 2 cut(s) 193, 244
ErhI CCWWGG 2 cut(s) 429, 735
Esp3I CGTCTC 4 cut(s) 148, 467, 1007, 1023
FaeI CATG 4 cut(s) 433, 558, 612, 722
FaiI YATR 4 cut(s) 431, 556, 610, 720
FaqI GGGAC 1 cut(s) 419
FatI CATG 4 cut(s) 429, 554, 608, 718
FauI CCCGC 2 cut(s) 352, 515
FblI GTMKAC 1 cut(s) 150
FokI GGATG 4 cut(s) 215, 585, 596, 917
FspBI CTAG 4 cut(s) 539, 990, 1026, 1030
GlaI GCGC 5 cut(s) 122, 193, 244, 394, 401
GsuI CTGGAG 1 cut(s) 137
HaeII RGCGCY 2 cut(s) 195, 246
HaeIII GGCC 6 cut(s) 224, 257, 377, 428, 451, 888
HapII CCGG 5 cut(s) 72, 156, 189, 240, 444
HgaI GACGC 4 cut(s) 124, 173, 245, 279
HhaI GCGC 5 cut(s) 123, 194, 245, 395, 402
Hin1I GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
Hin1II CATG 4 cut(s) 433, 558, 612, 722
Hin6I GCGC 5 cut(s) 121, 192, 243, 393, 400
HinP1I GCGC 5 cut(s) 121, 192, 243, 393, 400
HinfI GANTC 2 cut(s) 760, 828
HpaII CCGG 5 cut(s) 72, 156, 189, 240, 444
Hpy166II GTNNAC 5 cut(s) 139, 151, 300, 483, 859
Hpy188I TCNGA 3 cut(s) 35, 55, 163
Hpy188III TCNNGA 4 cut(s) 106, 262, 774, 965
Hpy8I GTNNAC 5 cut(s) 139, 151, 300, 483, 859
Hpy99I CGWCG 7 cut(s) 167, 239, 251, 263, 295, 473, 481
HpyAV CCTTC 1 cut(s) 771
HpyCH4III ACNGT 1 cut(s) 973
HpyCH4IV ACGT 5 cut(s) 141, 285, 413, 476, 1016
HpySE526I ACGT 5 cut(s) 141, 285, 413, 476, 1016
Hsp92I GRCGYC 7 cut(s) 165, 192, 237, 243, 290, 476, 1016
Hsp92II CATG 4 cut(s) 433, 558, 612, 722
HspAI GCGC 5 cut(s) 121, 192, 243, 393, 400
KasI GGCGCC 2 cut(s) 191, 242
KpnI GGTACC 1 cut(s) 784
KroI GCCGGC 1 cut(s) 239
KroNI GCCGGC 1 cut(s) 241
KspI CCGCGG 1 cut(s) 381
Kzo9I GATC 1 cut(s) 677
LmnI GCTCC 3 cut(s) 118, 164, 331
Lsp1109I GCAGC 6 cut(s) 254, 357, 563, 640, 657, 895
LweI GCATC 2 cut(s) 895, 946
MaeI CTAG 4 cut(s) 539, 990, 1026, 1030
MaeII ACGT 5 cut(s) 141, 285, 413, 476, 1016
MaeIII GTNAC 2 cut(s) 67, 812
MalI GATC 1 cut(s) 679
MboI GATC 1 cut(s) 677
MboII GAAGA 9 cut(s) 36, 169, 208, 457, 583, 614, 832, 965, 1022
MflI RGATCY 1 cut(s) 677
MhlI GDGCHC 3 cut(s) 302, 359, 411
MluCI AATT 1 cut(s) 806
Mly113I GGCGCC 2 cut(s) 192, 243
MlyI GAGTC 1 cut(s) 754
MmeI TCCRAC 1 cut(s) 186
MreI CGCCGGCG 1 cut(s) 239
MroNI GCCGGC 1 cut(s) 239
MroXI GAANNNNTTC 1 cut(s) 40
MseI TTAA 2 cut(s) 663, 920
MspA1I CMGCKG 1 cut(s) 380
MspI CCGG 5 cut(s) 72, 156, 189, 240, 444
MspR9I CCNGG 8 cut(s) 156, 189, 253, 326, 444, 633, 885, 929
Mva1269I GAATGC 1 cut(s) 646
MvaI CCWGG 5 cut(s) 253, 326, 633, 885, 929
MvnI CGCG 5 cut(s) 123, 135, 380, 395, 402
NaeI GCCGGC 1 cut(s) 241
NarI GGCGCC 2 cut(s) 192, 243
NciI CCSGG 3 cut(s) 156, 189, 444
NcoI CCATGG 1 cut(s) 429
NdeII GATC 1 cut(s) 677
NgoMIV GCCGGC 1 cut(s) 239
NlaIII CATG 4 cut(s) 433, 558, 612, 722
NlaIV GGNNCC 8 cut(s) 160, 193, 244, 312, 358, 435, 679, 782
NmeAIII GCCGAG 1 cut(s) 404
NmuCI GTSAC 2 cut(s) 67, 812
NspI RCATGY 2 cut(s) 612, 722
PaeR7I CTCGAG 1 cut(s) 305
PceI AGGCCT 1 cut(s) 888
PciI ACATGT 1 cut(s) 608
PcsI WCGNNNNNNNCGW 3 cut(s) 216, 243, 255
PctI GAATGC 1 cut(s) 646
PdiI GCCGGC 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 40
PfeI GAWTC 1 cut(s) 828
PleI GAGTC 1 cut(s) 754
PluTI GGCGCC 2 cut(s) 195, 246
PmaCI CACGTG 1 cut(s) 286
PmlI CACGTG 1 cut(s) 286
PpsI GAGTC 1 cut(s) 754
Ppu21I YACGTR 1 cut(s) 286
PpuMI RGGWCCY 1 cut(s) 310
PscI ACATGT 1 cut(s) 608
PshAI GACNNNNGTC 1 cut(s) 930
PshBI ATTAAT 1 cut(s) 920
Psp5II RGGWCCY 1 cut(s) 310
Psp6I CCWGG 5 cut(s) 251, 324, 631, 883, 927
PspCI CACGTG 1 cut(s) 286
PspGI CCWGG 5 cut(s) 251, 324, 631, 883, 927
PspN4I GGNNCC 8 cut(s) 160, 193, 244, 312, 358, 435, 679, 782
PspPI GGNCC 6 cut(s) 255, 310, 433, 450, 483, 617
PspPPI RGGWCCY 1 cut(s) 310
PspXI VCTCGAGB 1 cut(s) 305
PstI CTGCAG 3 cut(s) 375, 630, 675
PsuI RGATCY 1 cut(s) 677
RsaI GTAC 3 cut(s) 782, 790, 945
RsaNI GTAC 3 cut(s) 781, 789, 944
SacII CCGCGG 1 cut(s) 381
SaqAI TTAA 2 cut(s) 663, 920
Sau3AI GATC 1 cut(s) 677
Sau96I GGNCC 6 cut(s) 255, 310, 433, 450, 483, 617
SchI GAGTC 1 cut(s) 754
ScrFI CCNGG 8 cut(s) 156, 189, 253, 326, 444, 633, 885, 929
SduI GDGCHC 3 cut(s) 302, 359, 411
SfaNI GCATC 2 cut(s) 895, 946
SfcI CTRYAG 3 cut(s) 371, 626, 671
SfoI GGCGCC 2 cut(s) 193, 244
Sfr274I CTCGAG 1 cut(s) 305
Sfr303I CCGCGG 1 cut(s) 381
SgrAI CRCCGGYG 1 cut(s) 239
SgrBI CCGCGG 1 cut(s) 381
SinI GGWCC 4 cut(s) 310, 433, 483, 617
SlaI CTCGAG 1 cut(s) 305
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
Sse9I AATT 1 cut(s) 806
SseBI AGGCCT 1 cut(s) 888
SsiI CCGC 9 cut(s) 59, 123, 201, 329, 345, 378, 380, 508, 767
SspDI GGCGCC 2 cut(s) 191, 242
SspMI CTAG 4 cut(s) 539, 990, 1026, 1030
StuI AGGCCT 1 cut(s) 888
StyD4I CCNGG 8 cut(s) 154, 187, 251, 324, 442, 631, 883, 927
StyI CCWWGG 2 cut(s) 429, 735
TaaI ACNGT 1 cut(s) 973
TaiI ACGT 5 cut(s) 144, 288, 416, 479, 1019
TaqI TCGA 7 cut(s) 219, 234, 261, 306, 468, 492, 924
TaqII GACCGA 1 cut(s) 500
TasI AATT 1 cut(s) 806
TauI GCSGC 4 cut(s) 126, 380, 383, 770
TfiI GAWTC 1 cut(s) 828
Tru1I TTAA 2 cut(s) 663, 920
Tru9I TTAA 2 cut(s) 663, 920
TscAI CASTG 3 cut(s) 707, 817, 978
TseFI GTSAC 2 cut(s) 67, 812
TseI GCWGC 6 cut(s) 267, 370, 551, 628, 670, 908
Tsp45I GTSAC 2 cut(s) 67, 812
TspDTI ATGAA 1 cut(s) 76
TspGWI ACGGA 1 cut(s) 136
TspRI CASTG 3 cut(s) 707, 817, 978
VneI GTGCAC 1 cut(s) 298
VpaK11BI GGWCC 4 cut(s) 310, 433, 483, 617
VspI ATTAAT 1 cut(s) 920
XceI RCATGY 2 cut(s) 612, 722
XcmI CCANNNNNNNNNTGG 1 cut(s) 427
XhoI CTCGAG 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 150
XmnI GAANNNNTTC 1 cut(s) 40
XspI CTAG 4 cut(s) 539, 990, 1026, 1030
ZraI GACGTC 2 cut(s) 477, 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.