Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0011135

Physical Location & Seq

Genomic Coordinates Forward (+)

40932685 .. 40937155

Gene Structure 4471 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGCTGAAACACTGGAAAAGCCGCCCAAGGAGATCGAAAGCGAAGACGAAGAGGAGGACCAGACCTTCGAAAATCTCGGATTGGACGGCCGCCTTATTCGTGCTCTAAACAAGAAGAAGATTCTCAAGCCCACGCCAATTCAGCGAGTCGCTATTCCTCTCATCCTTGAGGGTAAGGATGTGGTGGCCAGAGCAAAGACTGGTTCTGGAAAGACCTTTGCTTACCTACTGCCTCTGCTTCAGAAACTGTTTACCGCTTCACAAGAATCAACCAAGAAACTCGCTCCTACTGCCGTTGTTCTGGTCCCAACTAGGGAGCTCTCTCAGCAGGTTTATAAGGAGGTCAGGTCGTTGATTGAACTGTGTAGAGTTCCATTGAAAGTCGTACAGTTGACAAGCAACATGCCTACTTCTGATTTGCGCACAGCTTTGGCGGGCCCGCCTGAGATTCTGGTTTCGACTCCAGCTTGCGTGAAGAAGTGCTTGTCAGATGGTGTTCTTCAAGCAACATCCATTGGTGATTCACTAGAAATGCTTGTGCTTGATGAGGCAGATCTTCTCTTGTCATATGGATATGAGGAAGACATAAAAGCTTTGACACCTCACATTCCTAAACGTTGTCAATCTCTTCTTATGTCTGCCACAGCAAGTGATGATGTTGAGAAACTAAAGAAGCTTATTCTACATAATTCCTATATTTTGACTTTGCCCGAAGTTGGAGATATCAAGGATGAGGTCATCCCAAAAAATGTTGAGCAGTCCTGGATATCATGCACTGCTCGTGACAAGTTACTATACATCCTTTCCCTCTTAAAGTTGGAGTTGGTTCAGAAAAAGGTTCTGATATTTACTAATACAATAGACACATCCTTCAGAATAAAGCTATTTTTGGAAAAGTTTGGCATAAGATCTGCTGTTTTGAATTCTGAGTTGCCACAAAATTCTCGTATCCACATTCTTGAGGAGTTCAATGCTGGTCTTTTTGATTACTTGATTGCAACTGATGACAGCGAAACAAAGGAGAAAAAAGAAAATGATCAGAAAAAGATCGATTCAAAAAATTCTAGACGACATGCTAAACCCAAACCCAAAGCTGACTCTGAATTTGGAGTGGTGCGAGGAATTGACTTCAAAAATGTACACACGGTTCTGAATTTTGATATGCCTCTAAGTGTTGAAGGATATGTTCATCGTATTGGTCGTACTGGAAGAGCATATAGTACTGGTGCTTCTGTGTCTCTTGTTTCTCCAGATGAGATGAAAGTTTTTGAAGAGATAAAGTCCTTTTTGGGTGATGATGAAGAAAATGATTCAAATAAACTTGTTCCATTTACTTTACTGACCAAGAATGCAGTGGAGTCTTTAAGATATAGAGCTGAGGATGTCTCAAAGAGTGTGACAAAACTTGCCGTGAGAGAATCCCGAGCTCAGGATTTGAGGAATGAAATTCTCAATTCTGAAAAGTTGAAGGCTCATTTTGAAGCCAACCAAAAGGATCTAGATCTATTGAAACATGACAAGGTTTTGAGCAAGAAGCCCCCTGCTCCTCACCTGCGAGTTGTGCCTGATTATCTGTTGGATGCAACAACTAAAGAAGCCAGCAAGAGAGTTAAGCTTGCGAGAGCTGCAATGGGTAACAACAACCCTGGTCGCCGTGGATTCAAGAAAAAATTCAAGAAAGATAAGGACCCCCTTAAGTCTCTCAGTGCTCAGGGACCCAAGAAAGGAAGAAGGGAAAGAAAAGACGGCGATGAGAACCATAAGCAAAAAAGGCAAAAGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

594

Amino Acids

66.77

Weight (kDa)

9.2

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	45 - 222	6.5e-39	DEAD/DEAH box helicase
Helicase_C	PF00271	266 - 405	9.8e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34910
fragaria_vesca	FvH4_5g29390 FvH4_5g29390
malus_domestica	MD02G1190200.v1.1
prunus_persica	Prupe.6G216200_v2.0.a1
pyrus_communis	pycom02g15430 pycom15g26400
rosa_chinensis	RchiOBHm_Chr7g0222281
rosa_laevigata	RLG00000002079 RLG00000016281
rosa_multiflora	Rmu_sc0013580.1_g000001
rosa_roxburghii	Rroxscaffold_3G00237230
rosa_rugosa	Rorug02G0023300 Rorug02G0023400 Rorug07G0206900
rosa_samantha	Rh7AG348700 Rh7BG338700 Rh7CG366200 Rh7DG345700
rosa_wichuraiana	Rw7G029490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AarI	CACCTGC	1 cut(s)	1560
Acc16I	TGCGCA	1 cut(s)	422
Acc36I	ACCTGC	2 cut(s)	319, 1560
AciI	CCGC	5 cut(s)	23, 91, 255, 434, 440
AclI	AACGTT	1 cut(s)	616
AclWI	GGATC	1 cut(s)	1503
AcoI	YGGCCR	2 cut(s)	88, 186
AcsI	RAATTY	7 cut(s)	922, 940, 1060, 1103, 1153, 1446, 1670
AcuI	CTGAAG	2 cut(s)	224, 856
AfaI	GTAC	4 cut(s)	387, 1140, 1204, 1222
AfiI	CCNNNNNNNGG	4 cut(s)	313, 716, 1429, 1724
AflII	CTTAAG	1 cut(s)	1694
AjnI	CCWGG	2 cut(s)	761, 1645
Alw21I	GWGCWC	4 cut(s)	106, 321, 1429, 1711
Alw26I	GTCTC	3 cut(s)	1242, 1390, 1704
AlwI	GGATC	1 cut(s)	1503
AlwNI	CAGNNNCTG	1 cut(s)	247
Ama87I	CYCGRG	1 cut(s)	1422
AoxI	GGCC	3 cut(s)	88, 186, 436
ApaI	GGGCCC	1 cut(s)	440
ApeKI	GCWGC	1 cut(s)	1625
ApoI	RAATTY	7 cut(s)	922, 940, 1060, 1103, 1153, 1446, 1670
ArsI	GACNNNNNNTTYG	4 cut(s)	50, 82, 1088, 1120
Asp700I	GAANNNNTTC	1 cut(s)	1670
AspLEI	GCGC	1 cut(s)	423
AspS9I	GGNCC	6 cut(s)	58, 304, 436, 437, 1687, 1715
AsuHPI	GGTGA	3 cut(s)	530, 1304, 1541
AsuII	TTCGAA	1 cut(s)	69
AvaI	CYCGRG	1 cut(s)	1422
AvaII	GGWCC	4 cut(s)	58, 304, 1687, 1715
BaeGI	GKGCMC	1 cut(s)	440
BalI	TGGCCA	1 cut(s)	188
BanII	GRGCYC	3 cut(s)	321, 440, 1429
BarI	GAAGNNNNNNTAC	2 cut(s)	1213, 1245
BauI	CACGAG	1 cut(s)	780
BbsI	GAAGAC	2 cut(s)	51, 588
Bbv12I	GWGCWC	4 cut(s)	106, 321, 1429, 1711
BbvCI	CCTCAGC	1 cut(s)	1377
BbvI	GCAGC	1 cut(s)	1612
BccI	CCATC	1 cut(s)	485
BceAI	ACGGC	5 cut(s)	103, 278, 1394, 1638, 1762
BciT130I	CCWGG	2 cut(s)	763, 1647
BciVI	GTATCC	1 cut(s)	959
BclI	TGATCA	1 cut(s)	1036
BcoDI	GTCTC	3 cut(s)	1242, 1390, 1704
BfaI	CTAG	4 cut(s)	312, 527, 1065, 1499
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	2 cut(s)	319, 1560
BfuI	GTATCC	1 cut(s)	959
BglII	AGATCT	3 cut(s)	553, 908, 1501
BisI	GCNGC	3 cut(s)	23, 91, 1626
BlsI	GCNGC	3 cut(s)	24, 92, 1627
BmcAI	AGTACT	1 cut(s)	1222
Bme1390I	CCNGG	2 cut(s)	763, 1647
Bme18I	GGWCC	4 cut(s)	58, 304, 1687, 1715
BmeT110I	CYCGRG	1 cut(s)	1422
BmgT120I	GGNCC	6 cut(s)	58, 304, 436, 437, 1687, 1715
BmiI	GGNNCC	5 cut(s)	306, 438, 1689, 1716, 1717
BmrFI	CCNGG	2 cut(s)	763, 1647
BmsI	GCATC	1 cut(s)	1570
BpiI	GAAGAC	2 cut(s)	51, 588
BplI	GAGNNNNNCTC	2 cut(s)	1370, 1402
BpmI	CTGGAG	2 cut(s)	447, 1233
Bpu10I	CCTNAGC	3 cut(s)	1377, 1428, 1710
Bpu14I	TTCGAA	1 cut(s)	69
BpuEI	CTTGAG	3 cut(s)	110, 188, 980
Bsa29I	ATCGAT	1 cut(s)	1050
BsaBI	GATNNNNATC	1 cut(s)	1500
BsaJI	CCNNGG	3 cut(s)	27, 1645, 1654
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	4 cut(s)	313, 716, 1429, 1724
Bse1I	ACTGG	4 cut(s)	18, 205, 1210, 1228
Bse3DI	GCAATG	1 cut(s)	1635
Bse8I	GATNNNNATC	1 cut(s)	1500
BseBI	CCWGG	2 cut(s)	763, 1647
BseCI	ATCGAT	1 cut(s)	1050
BseDI	CCNNGG	3 cut(s)	27, 1645, 1654
BseGI	GGATG	9 cut(s)	162, 184, 509, 736, 738, 798, 866, 1387, 1585
BseJI	GATNNNNATC	1 cut(s)	1500
BseLI	CCNNNNNNNGG	4 cut(s)	313, 716, 1429, 1724
BseMI	GCAATG	1 cut(s)	1635
BseMII	CTCAG	7 cut(s)	338, 435, 918, 1368, 1442, 1717, 1724
BseNI	ACTGG	4 cut(s)	18, 205, 1210, 1228
BseRI	GAGGAG	3 cut(s)	68, 977, 1536
BseSI	GKGCMC	1 cut(s)	440
BseX3I	CGGCCG	1 cut(s)	88
BseXI	GCAGC	1 cut(s)	1612
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	3 cut(s)	90, 188, 438
BshVI	ATCGAT	1 cut(s)	1050
BsiEI	CGRYCG	1 cut(s)	91
BsiHKAI	GWGCWC	4 cut(s)	106, 321, 1429, 1711
BsiHKCI	CYCGRG	1 cut(s)	1422
BslFI	GGGAC	2 cut(s)	290, 1728
BslI	CCNNNNNNNGG	4 cut(s)	313, 716, 1429, 1724
BsmAI	GTCTC	3 cut(s)	1242, 1390, 1704
BsmFI	GGGAC	2 cut(s)	290, 1728
BsmI	GAATGC	1 cut(s)	1354
BsnI	GGCC	3 cut(s)	90, 188, 438
BsoBI	CYCGRG	1 cut(s)	1422
Bsp119I	TTCGAA	1 cut(s)	69
Bsp120I	GGGCCC	1 cut(s)	436
Bsp1286I	GDGCHC	5 cut(s)	106, 321, 440, 1429, 1711
Bsp1407I	TGTACA	1 cut(s)	1138
Bsp143I	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
BspACI	CCGC	5 cut(s)	23, 91, 255, 434, 440
BspANI	GGCC	3 cut(s)	90, 188, 438
BspCNI	CTCAG	7 cut(s)	337, 436, 919, 1369, 1441, 1716, 1723
BspDI	ATCGAT	1 cut(s)	1050
BspLI	GGNNCC	5 cut(s)	306, 438, 1689, 1716, 1717
BspMI	ACCTGC	2 cut(s)	319, 1560
BspPI	GGATC	1 cut(s)	1503
BspQI	GCTCTTC	1 cut(s)	1204
BspT104I	TTCGAA	1 cut(s)	69
BspTI	CTTAAG	1 cut(s)	1694
BsrDI	GCAATG	1 cut(s)	1635
BsrGI	TGTACA	1 cut(s)	1138
BsrI	ACTGG	4 cut(s)	18, 205, 1210, 1228
BssECI	CCNNGG	3 cut(s)	27, 1645, 1654
BssMI	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
BssSI	CACGAG	1 cut(s)	780
BssT1I	CCWWGG	1 cut(s)	27
Bst2BI	CACGAG	1 cut(s)	780
Bst2UI	CCWGG	2 cut(s)	763, 1647
Bst4CI	ACNGT	4 cut(s)	249, 363, 390, 1147
Bst6I	CTCTTC	4 cut(s)	45, 633, 1204, 1266
BstAFI	CTTAAG	1 cut(s)	1694
BstAUI	TGTACA	1 cut(s)	1138
BstBI	TTCGAA	1 cut(s)	69
BstC8I	GCNNGC	5 cut(s)	436, 440, 469, 1600, 1617
BstDEI	CTNAG	8 cut(s)	324, 444, 927, 1169, 1377, 1428, 1703, 1710
BstDSI	CCRYGG	1 cut(s)	1654
BstF5I	GGATG	9 cut(s)	162, 184, 509, 736, 738, 798, 866, 1387, 1585
BstHHI	GCGC	1 cut(s)	423
BstKTI	GATC	7 cut(s)	36, 556, 911, 1039, 1050, 1498, 1504
BstMAI	GTCTC	3 cut(s)	1242, 1390, 1704
BstMBI	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	6 cut(s)	142, 290, 325, 1561, 1625, 1771
BstNI	CCWGG	2 cut(s)	763, 1647
BstNSI	RCATGY	2 cut(s)	406, 1076
BstSCI	CCNGG	2 cut(s)	761, 1645
BstSLI	GKGCMC	1 cut(s)	440
BstV1I	GCAGC	1 cut(s)	1612
BstV2I	GAAGAC	2 cut(s)	51, 588
BstX2I	RGATCY	4 cut(s)	553, 908, 1495, 1501
BstYI	RGATCY	4 cut(s)	553, 908, 1495, 1501
BstZI	CGGCCG	1 cut(s)	88
Bsu15I	ATCGAT	1 cut(s)	1050
BsuI	GTATCC	1 cut(s)	959
BsuRI	GGCC	3 cut(s)	90, 188, 438
BsuTUI	ATCGAT	1 cut(s)	1050
BtgI	CCRYGG	1 cut(s)	1654
BtgZI	GCGATG	1 cut(s)	1764
BtsCI	GGATG	9 cut(s)	162, 184, 509, 736, 738, 798, 866, 1387, 1585
BtsI	GCAGTG	2 cut(s)	774, 1359
BtsIMutI	CAGTG	4 cut(s)	11, 774, 1359, 1711
BveI	ACCTGC	2 cut(s)	319, 1560
Cac8I	GCNNGC	5 cut(s)	436, 440, 469, 1600, 1617
CaiI	CAGNNNCTG	1 cut(s)	247
CfoI	GCGC	1 cut(s)	423
Cfr13I	GGNCC	6 cut(s)	58, 304, 436, 437, 1687, 1715
ClaI	ATCGAT	1 cut(s)	1050
Csp6I	GTAC	4 cut(s)	386, 1139, 1203, 1221
CviAII	CATG	4 cut(s)	403, 771, 1073, 1514
CviQI	GTAC	4 cut(s)	386, 1139, 1203, 1221
DdeI	CTNAG	8 cut(s)	324, 444, 927, 1169, 1377, 1428, 1703, 1710
DpnI	GATC	7 cut(s)	35, 555, 910, 1038, 1049, 1497, 1503
DpnII	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
EaeI	YGGCCR	2 cut(s)	88, 186
EagI	CGGCCG	1 cut(s)	88
Eam1104I	CTCTTC	4 cut(s)	45, 633, 1204, 1266
EarI	CTCTTC	4 cut(s)	45, 633, 1204, 1266
Ecl136II	GAGCTC	2 cut(s)	319, 1427
EclXI	CGGCCG	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	27
Eco24I	GRGCYC	3 cut(s)	321, 440, 1429
Eco32I	GATATC	2 cut(s)	724, 768
Eco47I	GGWCC	4 cut(s)	58, 304, 1687, 1715
Eco52I	CGGCCG	1 cut(s)	88
Eco53kI	GAGCTC	2 cut(s)	319, 1427
Eco57I	CTGAAG	2 cut(s)	224, 856
Eco88I	CYCGRG	1 cut(s)	1422
EcoICRI	GAGCTC	2 cut(s)	319, 1427
EcoO109I	RGGNCCY	2 cut(s)	1687, 1715
EcoRI	GAATTC	1 cut(s)	922
EcoRII	CCWGG	2 cut(s)	761, 1645
EcoRV	GATATC	2 cut(s)	724, 768
EcoT14I	CCWWGG	1 cut(s)	27
EcoT38I	GRGCYC	3 cut(s)	321, 440, 1429
ErhI	CCWWGG	1 cut(s)	27
FaeI	CATG	4 cut(s)	406, 774, 1076, 1517
FalI	AAGNNNNNCTT	2 cut(s)	467, 499
FaqI	GGGAC	2 cut(s)	290, 1728
FatI	CATG	4 cut(s)	402, 770, 1072, 1513
FauI	CCCGC	2 cut(s)	427, 447
FauNDI	CATATG	1 cut(s)	568
FbaI	TGATCA	1 cut(s)	1036
Fnu4HI	GCNGC	3 cut(s)	23, 91, 1626
FokI	GGATG	9 cut(s)	149, 191, 496, 725, 743, 785, 853, 1394, 1592
FriOI	GRGCYC	3 cut(s)	321, 440, 1429
Fsp4HI	GCNGC	3 cut(s)	23, 91, 1626
FspBI	CTAG	4 cut(s)	312, 527, 1065, 1499
FspI	TGCGCA	1 cut(s)	422
GlaI	GCGC	1 cut(s)	422
GluI	GCNGC	3 cut(s)	23, 91, 1626
GsuI	CTGGAG	2 cut(s)	447, 1233
HaeIII	GGCC	3 cut(s)	90, 188, 438
HhaI	GCGC	1 cut(s)	423
Hin1II	CATG	4 cut(s)	406, 774, 1076, 1517
Hin6I	GCGC	1 cut(s)	421
HinP1I	GCGC	1 cut(s)	421
HincII	GTYRAC	1 cut(s)	393
HindII	GTYRAC	1 cut(s)	393
HindIII	AAGCTT	3 cut(s)	591, 674, 1613
HphI	GGTGA	3 cut(s)	530, 1304, 1541
Hpy166II	GTNNAC	3 cut(s)	252, 393, 1141
Hpy8I	GTNNAC	3 cut(s)	252, 393, 1141
HpyAV	CCTTC	5 cut(s)	76, 880, 1172, 1462, 1725
HpyCH4III	ACNGT	4 cut(s)	249, 363, 390, 1147
HpyCH4IV	ACGT	1 cut(s)	616
HpyCH4V	TGCA	5 cut(s)	774, 998, 1352, 1583, 1628
HpyF10VI	GCNNNNNNNGC	6 cut(s)	142, 290, 325, 1561, 1625, 1771
HpyF3I	CTNAG	8 cut(s)	324, 444, 927, 1169, 1377, 1428, 1703, 1710
HpySE526I	ACGT	1 cut(s)	616
Hsp92II	CATG	4 cut(s)	406, 774, 1076, 1517
HspAI	GCGC	1 cut(s)	421
KflI	GGGWCCC	1 cut(s)	1715
Ksp22I	TGATCA	1 cut(s)	1036
Kzo9I	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
LguI	GCTCTTC	1 cut(s)	1204
LmnI	GCTCC	3 cut(s)	289, 316, 1549
Lsp1109I	GCAGC	1 cut(s)	1612
LweI	GCATC	1 cut(s)	1570
MaeI	CTAG	4 cut(s)	312, 527, 1065, 1499
MaeII	ACGT	1 cut(s)	616
MaeIII	GTNAC	4 cut(s)	782, 789, 1396, 1634
MalI	GATC	7 cut(s)	35, 555, 910, 1038, 1049, 1497, 1503
MboI	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
MflI	RGATCY	4 cut(s)	553, 908, 1495, 1501
MhlI	GDGCHC	5 cut(s)	106, 321, 440, 1429, 1711
MlsI	TGGCCA	1 cut(s)	188
MluNI	TGGCCA	1 cut(s)	188
MlyI	GAGTC	4 cut(s)	156, 454, 1091, 1367
MmeI	TCCRAC	3 cut(s)	697, 798, 1557
Mox20I	TGGCCA	1 cut(s)	188
MroXI	GAANNNNTTC	1 cut(s)	1670
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	5 cut(s)	812, 1364, 1611, 1695, 1783
Msp20I	TGGCCA	1 cut(s)	188
MspCI	CTTAAG	1 cut(s)	1694
MspR9I	CCNGG	2 cut(s)	763, 1647
Mva1269I	GAATGC	1 cut(s)	1354
MvaI	CCWGG	2 cut(s)	763, 1647
MwoI	GCNNNNNNNGC	6 cut(s)	142, 290, 325, 1561, 1625, 1771
NdeI	CATATG	1 cut(s)	568
NdeII	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
NlaIII	CATG	4 cut(s)	406, 774, 1076, 1517
NlaIV	GGNNCC	5 cut(s)	306, 438, 1689, 1716, 1717
NmuCI	GTSAC	2 cut(s)	782, 1396
NsbI	TGCGCA	1 cut(s)	422
NspI	RCATGY	2 cut(s)	406, 1076
NspV	TTCGAA	1 cut(s)	69
PaqCI	CACCTGC	1 cut(s)	1560
PciSI	GCTCTTC	1 cut(s)	1204
PcsI	WCGNNNNNNNCGW	1 cut(s)	1198
PctI	GAATGC	1 cut(s)	1354
PdmI	GAANNNNTTC	1 cut(s)	1670
PfeI	GAWTC	8 cut(s)	121, 266, 448, 521, 1052, 1310, 1418, 1659
PfoI	TCCNGGA	1 cut(s)	761
PkrI	GCNGC	3 cut(s)	24, 92, 1627
PleI	GAGTC	4 cut(s)	155, 454, 1091, 1366
PpsI	GAGTC	4 cut(s)	155, 454, 1091, 1366
PpuMI	RGGWCCY	2 cut(s)	1687, 1715
PsiI	TTATAA	1 cut(s)	336
Psp124BI	GAGCTC	2 cut(s)	321, 1429
Psp1406I	AACGTT	1 cut(s)	616
Psp5II	RGGWCCY	2 cut(s)	1687, 1715
Psp6I	CCWGG	2 cut(s)	761, 1645
PspGI	CCWGG	2 cut(s)	761, 1645
PspN4I	GGNNCC	5 cut(s)	306, 438, 1689, 1716, 1717
PspOMI	GGGCCC	1 cut(s)	436
PspPI	GGNCC	6 cut(s)	58, 304, 436, 437, 1687, 1715
PspPPI	RGGWCCY	2 cut(s)	1687, 1715
PsrI	GAACNNNNNNTAC	2 cut(s)	1131, 1163
PstNI	CAGNNNCTG	1 cut(s)	247
PsuI	RGATCY	4 cut(s)	553, 908, 1495, 1501
RsaI	GTAC	4 cut(s)	387, 1140, 1204, 1222
RsaNI	GTAC	4 cut(s)	386, 1139, 1203, 1221
SacI	GAGCTC	2 cut(s)	321, 1429
SapI	GCTCTTC	1 cut(s)	1204
SaqAI	TTAA	5 cut(s)	812, 1364, 1611, 1695, 1783
SatI	GCNGC	3 cut(s)	23, 91, 1626
Sau3AI	GATC	7 cut(s)	33, 553, 908, 1036, 1047, 1495, 1501
Sau96I	GGNCC	6 cut(s)	58, 304, 436, 437, 1687, 1715
ScaI	AGTACT	1 cut(s)	1222
SchI	GAGTC	4 cut(s)	156, 454, 1091, 1367
ScrFI	CCNGG	2 cut(s)	763, 1647
SduI	GDGCHC	5 cut(s)	106, 321, 440, 1429, 1711
SfaNI	GCATC	1 cut(s)	1570
SfuI	TTCGAA	1 cut(s)	69
SinI	GGWCC	4 cut(s)	58, 304, 1687, 1715
SmlI	CTYRAG	4 cut(s)	125, 167, 959, 1694
SmoI	CTYRAG	4 cut(s)	125, 167, 959, 1694
SsiI	CCGC	5 cut(s)	23, 91, 255, 434, 440
SspMI	CTAG	4 cut(s)	312, 527, 1065, 1499
SstI	GAGCTC	2 cut(s)	321, 1429
StyD4I	CCNGG	2 cut(s)	761, 1645
StyI	CCWWGG	1 cut(s)	27
TaaI	ACNGT	4 cut(s)	249, 363, 390, 1147
TaiI	ACGT	1 cut(s)	619
TaqI	TCGA	4 cut(s)	36, 69, 458, 1050
TatI	WGTACW	2 cut(s)	1138, 1220
TauI	GCSGC	2 cut(s)	25, 93
TfiI	GAWTC	8 cut(s)	121, 266, 448, 521, 1052, 1310, 1418, 1659
Tru1I	TTAA	5 cut(s)	812, 1364, 1611, 1695, 1783
Tru9I	TTAA	5 cut(s)	812, 1364, 1611, 1695, 1783
TscAI	CASTG	4 cut(s)	18, 781, 1359, 1711
TseFI	GTSAC	2 cut(s)	782, 1396
TseI	GCWGC	1 cut(s)	1625
Tsp45I	GTSAC	2 cut(s)	782, 1396
TspDTI	ATGAA	4 cut(s)	1178, 1274, 1314, 1458
TspRI	CASTG	4 cut(s)	18, 781, 1359, 1711
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	4 cut(s)	58, 304, 1687, 1715
XapI	RAATTY	7 cut(s)	922, 940, 1060, 1103, 1153, 1446, 1670
XbaI	TCTAGA	2 cut(s)	1064, 1498
XceI	RCATGY	2 cut(s)	406, 1076
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1351
XmnI	GAANNNNTTC	1 cut(s)	1670
XspI	CTAG	4 cut(s)	312, 527, 1065, 1499
ZrmI	AGTACT	1 cut(s)	1222

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.