Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0006243

Physical Location & Seq

Genomic Coordinates Reverse (-)

43268829 .. 43284660

Gene Structure 15832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G030480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3387 bp

ATGGCGTATGTGAAACGAAATGAGAAATACGTGATTGCGTTTGCTGGGGTATTTGGCCCTAAACGAAGACTCAGCCGCTTCATCTACATAAACGATGATGATTCATCGCACTATCCTTACTGTGACAATCGTATATCCAATAGAAAGTACACTGTGTTGAACTTTCTCCCCAAGAATTTATGGGAACAATTCAGCCGCTTCATGAATCAGTACTTTTTGTTGATTGCTTGCCTTCAGCTATGGTCGCTTATTACTCCAGTAAATCCTGCCAGCACATGGGGTCCACTTATCTTCATTTTTGCAGTCTCTGCATCAAAAGAGGCCTGGGATGATTACAACAGATATCTCTCAGACAAGAAGGCAAATGAGAAAGAAGTTTGGGTCGTCAGGCATGGCATCAAAAAACATATACAAGCGCAAGATATTCGTCTTGGTAACATAGTTTGGTTGCGGGAGAATGATGAAGTGCCATGTGACCTAGTTTTGATTGGTACCTCAGAAGCACAAGGCCTATGCTATATAGAGACTGCAGCCCTAGATGGAGAAACTGATCTGAAGACCAGGGTCATACCACCCGCTTGTATGGGGATAGATCTTGAACTGTTGCACAAAATTAAGGGTGTAATTGAGTGCCCTAATCCTGATAAGGACATTCGAAGATTTGATGCAAATATGCGGTTGTTTCCCCCATTTATTGATAATGACCTCTGCCCATTAACCATAAAGAATACTATTCTTCAGTCATGTTACTTGCGAAATACAGAGTGGGCCTGTGGAGTAGCAGTTTACACTGGCAATGAAACCAAGCTTGGTATGACTAGGGGCATTCCTGAGCCAAAGCTTACAGCTGTTGATGCTATGATTGACAAGTTGACAGGAGCTATATTTGTTTTCCAAGTAGTGGTGGTTATGGTTCTAGGCGTTGCCGGTAATGTCTGGAAGGATACAGAAGCAAGGAAGCAATGGTATGTTCTATATCCAGAGGAAGGTCCTTGGTACGAACTATTAGTAATCCCTCTTCGGTTTGAACTACTTTGTTCCATCATGATACCCATATCAATTAAGGTATCTCTTGACCTTGTCAAGAGCTTGTACGCAAAGTTTATCGATTGGGATAGTAAAATGATTGACCGAGAAACAGCTACTCCAGCCCATGCAACAAATACAGCAATAAGTGAGGACCTGGGACAAGTTGAGTACATTCTGACTGATAAAACTGGTACCCTAACGGAAAATAAAATGATATTTAGAAGGTGTTGTATCAATGGCATTTACTATGGGAATGAGAATGGAAATGCCTTAAAAGATGAGGAGCTCATTGATGCTATTTCCAGTGGGTCTTCTGATGTTATACGTTTCCTTACAGTTATGGCGATATGTAATACAGTCATACCCATTCAAAGCAAAAATGGAAGTATCGTGTACAAGGCACAATCTCAAGATGAGGATGCTCTTGTTCATGCTGCTGCCCAGCTACATATGGTTTTTGTCAATAAAAATGCTAACATTCTTGAGATCAAATTCAACGGTTCTACAGTTCAGTATGAAGCCTTGGATATTCTGGAGTTCACTTCTGATAGAAAAAGAATGTCAGTAGTGGTAAAGGATTGTCACAATGGAAGGATTATTCTTTTATCAAAGGGAGCAGATGAATCAATTCTTCCTTATGCATGTGCTGGACAGCAAACAAGGACTATTATTGAAGCTGTTGAGCAATATTCTCAGTTGGGACTACGGACACTGTGTCTAGCTTGGCGTGAACTAAAAGAAGAGGAATATCGAGAATGGTCTTTGATGTATAAAGAGGCTAGCAGCACATTGGTTGATAGAGAGTGGAGGCTAGCGGAGGTCTGTCAAAGATTAGAACATGATTTTGAAATACTTGGAGTTACTGCAATAGAGGATCGCCTACAGGATGGCGTACCAGAGACAATTGAGACGCTGAGGAAAGCTGGCATAAACTTTTGGATGCTTACTGGAGACAAGCAGAACACTGCCATACAGATAGCTCTTTCATGCAATTTCATTTCCCCAGAGCCAAAAGGCCAGCTTTTGTTACTTGATGGGAAAACTGAAGATGAAGTTCGGAGAAGTTTAGAGAGAGTTTTACTCACAATGCGGATAACAACTTCAGAACCTAAGGATGTGGCGTTTGTCATTGATGGCTGGTCTCTTGAAATTGCACTGAAGCATTATCGGAAATCTTTTACAGAGTTGGCAATATTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAGAAAGCTCAGCTTGTGGAGATTTTAAAATCGTGTGACTATAGAACGTTGGCCATTGGGGATGGTGGGAATGATGTGAGAATGATACAACAAGCTGACATTGGTGTTGGCATTAGCGGGAGAGAAGGACTGCAGGCAGCTAGGGCCGCTGATTATAGTATTGGGAAGTTCATGTTCCTGAAAAGATTGATACTTGTTCATGGGCGTTACTCATACAACCGCACAGCATTTCTGTCTCAGTATTCTTTTTACAAGTCATTGGTCGTATGTTTCATCCAGATTTTTTTCTCTTTTATTTCAGGGGTCTCTGGAACCAGTCTTTTCAATTCTGTTAGCTTGATGGCTTATAATGTCTTCTACACCAGTGTTCCTGTTCTAGCCAGCGTCCTTGATAAAGATCTTAGTGAGGAAACTATTATGCAGCATCCACAGATTCTATTCTATTGCCAAGCGGGAAGGCTTCTGAATCCTAGCACGTTTGCTGGATGGTTTGGGCGATCCCTTTTCCACGCAATTGTTGTATTTGTGATCAGCATACATGCTTATGCTTATGAAAAAAGTGAAATGGAGGAGGTTTCAATGGTGGCGCTCTCTGGATGTATTTGGCTGCAGGCTTTTGTAATGACATTAGAGACGAACTCCTTTACTATATTGCAACATCTTGCTATATGGGGGAATTTAGCTGCCTTCTACATCATCAACTGGATCTTCAGTGCCATTCCAGGATCAGGGATGTATACAATTATGTTTCGCTTGTGTAGAGAGCCTTCTTACTGGATAACAATCTTGCTCATAGTTGCAGCAGGAATGGGCCCGATTCTAGCGTTGAAGTACTTCAGGTATACATACAGACCAAGCAAAATCAATACACTACAGCAGGCTGAACGTTTGGGTGGGCCTATCCTGTCTATTGGGAGCATTGAGCCACAAACAAGAGGCGTAGAAAAGGAAGTTTCTCCATTATCAATTACTCAACCCAAGAACAGAAATCCGATTTTCGAACCTCTATTATCAGATTCACCCAATGCTACACGAAGATCTTTTGGTTCAGGGACGCCTTTTGATTTCTTTCAATCACAGTCCAGATTGTCCATGTCTAACTACTCAAGAAACAAGGACAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0008150 GO:0009987 GO:0010876 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0033036 GO:0034204 GO:0042623 GO:0043492 GO:0044464 GO:0045332 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase Hydrolase_3 PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1128

Amino Acids

127.76

Weight (kDa)

6.29

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	28 - 93	3.1e-24	Phospholipid-translocating ATPase N-terminal
E1-E2_ATPase	PF00122	123 - 185	3.4e-06	P-type ATPase actuator domain
Cation_ATPase	PF13246	450 - 638	1.6e-16	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	801 - 1040	2e-64	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44240 AT5G44240
fragaria_vesca	FvH4_5g29681 FvH4_5g29681 FvH4_5g29681 FvH4_5g29681 FvH4_5g29681 FvH4_5g29681
malus_domestica	MD09G1243400.v1.1 MD17G1235400.v1.1
prunus_persica	Prupe.3G133300_v2.0.a1 Prupe.3G133300_v2.0.a1 Prupe.3G133300_v2.0.a1
pyrus_communis	pycom09g16200 pycom17g23850
rosa_chinensis	RchiOBHm_Chr7g0223111
rosa_laevigata	RLG00000002001 RLG00000002345
rosa_multiflora	Rmu_sc0006373.1_g000014
rosa_roxburghii	Rroxscaffold_3G00236330
rosa_rugosa	Rorug07G0212900 Rorug07G0212900
rosa_samantha	Rh7AG358200 Rh7BG346300 Rh7CG376500 Rh7DG353600
rosa_wichuraiana	Rw7G030480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2610
Acc65I	GGTACC	2 cut(s)	491, 1220
AccB1I	GGYRCC	2 cut(s)	491, 1220
AccB7I	CCANNNNNTGG	2 cut(s)	276, 901
AccI	GTMKAC	2 cut(s)	2999, 3104
AclI	AACGTT	2 cut(s)	2309, 3148
AclWI	GGATC	4 cut(s)	1911, 2754, 2975, 2995
AcoI	YGGCCR	1 cut(s)	2313
AcsI	RAATTY	3 cut(s)	175, 1520, 2938
AcuI	CTGAAG	8 cut(s)	218, 575, 722, 2094, 2115, 2207, 2956, 3082
AcyI	GRCGYC	1 cut(s)	3317
AfiI	CCNNNNNNNGG	4 cut(s)	276, 901, 986, 2990
AhdI	GACNNNNNGTC	1 cut(s)	1743
AjnI	CCWGG	4 cut(s)	323, 560, 1182, 2983
AjuI	GAANNNNNNNTTGG	2 cut(s)	792, 824
Alw21I	GWGCWC	1 cut(s)	1317
Alw26I	GTCTC	9 cut(s)	310, 518, 1922, 1931, 1974, 2175, 2502, 2572, 2888
AlwI	GGATC	4 cut(s)	1911, 2754, 2975, 2995
AlwNI	CAGNNNCTG	1 cut(s)	308
AoxI	GGCC	9 cut(s)	55, 321, 508, 768, 2044, 2313, 2406, 3073, 3158
ApaI	GGGCCC	1 cut(s)	3077
ApeKI	GCWGC	9 cut(s)	530, 1463, 1466, 1812, 2399, 2683, 2869, 2945, 3062
ApoI	RAATTY	3 cut(s)	175, 1520, 2938
Asp700I	GAANNNNTTC	2 cut(s)	1656, 3095
Asp718I	GGTACC	2 cut(s)	491, 1220
AspLEI	GCGC	2 cut(s)	418, 2851
AspS9I	GGNCC	9 cut(s)	56, 281, 768, 989, 1180, 2406, 3073, 3074, 3158
AsuHPI	GGTGA	1 cut(s)	3273
AsuII	TTCGAA	2 cut(s)	655, 3261
AsuNHI	GCTAGC	2 cut(s)	1808, 1840
AvaII	GGWCC	3 cut(s)	281, 989, 1180
AxyI	CCTNAGG	1 cut(s)	2139
BaeGI	GKGCMC	2 cut(s)	635, 3077
BalI	TGGCCA	1 cut(s)	2315
BanI	GGYRCC	2 cut(s)	491, 1220
BanII	GRGCYC	2 cut(s)	1317, 3077
BarI	GAAGNNNNNNTAC	4 cut(s)	1002, 1034, 3013, 3045
BbsI	GAAGAC	4 cut(s)	73, 563, 1332, 2608
Bbv12I	GWGCWC	1 cut(s)	1317
BbvCI	CCTCAGC	1 cut(s)	1943
BbvI	GCAGC	9 cut(s)	542, 1450, 1453, 1824, 2411, 2695, 2856, 2932, 3074
BccI	CCATC	9 cut(s)	533, 1049, 1910, 2057, 2156, 2266, 2318, 2596, 2742
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	4 cut(s)	325, 562, 1184, 2985
BciVI	GTATCC	1 cut(s)	937
BclI	TGATCA	1 cut(s)	2790
BcoDI	GTCTC	9 cut(s)	310, 518, 1922, 1931, 1974, 2175, 2502, 2572, 2888
BfmI	CTRYAG	7 cut(s)	528, 1533, 1910, 2302, 2393, 2870, 3134
BfoI	RGCGCY	1 cut(s)	2852
BfuI	GTATCC	1 cut(s)	937
BglII	AGATCT	3 cut(s)	592, 2659, 3299
BlpI	GCTNAGC	1 cut(s)	2271
BmcAI	AGTACT	2 cut(s)	212, 3095
Bme1390I	CCNGG	4 cut(s)	325, 562, 1184, 2985
Bme18I	GGWCC	3 cut(s)	281, 989, 1180
BmeRI	GACNNNNNGTC	1 cut(s)	1743
BmgT120I	GGNCC	9 cut(s)	56, 281, 768, 989, 1180, 2406, 3073, 3074, 3158
BmiI	GGNNCC	5 cut(s)	282, 493, 1222, 2575, 3075
BmrFI	CCNGG	4 cut(s)	325, 562, 1184, 2985
BmsI	GCATC	8 cut(s)	320, 405, 655, 844, 1312, 1438, 1959, 2695
BmtI	GCTAGC	2 cut(s)	1812, 1844
BoxI	GACNNNNGTC	1 cut(s)	563
BpiI	GAAGAC	4 cut(s)	73, 563, 1332, 2608
BplI	GAGNNNNNCTC	4 cut(s)	2094, 2126, 2885, 2917
BpmI	CTGGAG	4 cut(s)	240, 1131, 1583, 1998
Bpu10I	CCTNAGC	2 cut(s)	831, 1943
Bpu1102I	GCTNAGC	1 cut(s)	2271
Bpu14I	TTCGAA	2 cut(s)	655, 3261
BpuEI	CTTGAG	3 cut(s)	1422, 1532, 3352
Bsa29I	ATCGAT	1 cut(s)	1107
BsaAI	YACGTR	1 cut(s)	31
BsaBI	GATNNNNATC	2 cut(s)	2658, 3044
BsaHI	GRCGYC	1 cut(s)	3317
BsaI	GGTCTC	2 cut(s)	2175, 2572
BsaJI	CCNNGG	5 cut(s)	324, 561, 992, 1183, 1551
BsaXI	ACNNNNNCTCC	4 cut(s)	768, 798, 1129, 1159
Bsc4I	CCNNNNNNNGG	4 cut(s)	276, 901, 986, 2990
Bse118I	RCCGGY	1 cut(s)	926
Bse1I	ACTGG	9 cut(s)	257, 796, 1222, 1332, 1981, 2577, 2625, 2969, 3041
Bse21I	CCTNAGG	1 cut(s)	2139
Bse3DI	GCAATG	2 cut(s)	802, 968
Bse8I	GATNNNNATC	2 cut(s)	2658, 3044
BseBI	CCWGG	4 cut(s)	325, 562, 1184, 2985
BseCI	ATCGAT	1 cut(s)	1107
BseDI	CCNNGG	5 cut(s)	324, 561, 992, 1183, 1551
BseJI	GATNNNNATC	2 cut(s)	2658, 3044
BseLI	CCNNNNNNNGG	4 cut(s)	276, 901, 986, 2990
BseMI	GCAATG	2 cut(s)	802, 968
BseMII	CTCAG	8 cut(s)	85, 363, 510, 822, 1736, 1934, 2285, 2513
BseNI	ACTGG	9 cut(s)	257, 796, 1222, 1332, 1981, 2577, 2625, 2969, 3041
BseRI	GAGGAG	2 cut(s)	1325, 2846
BseSI	GKGCMC	2 cut(s)	635, 3077
BseXI	GCAGC	9 cut(s)	542, 1450, 1453, 1824, 2411, 2695, 2856, 2932, 3074
BseYI	CCCAGC	2 cut(s)	44, 1470
BshFI	GGCC	9 cut(s)	57, 323, 510, 770, 2046, 2315, 2408, 3075, 3160
BshNI	GGYRCC	2 cut(s)	491, 1220
BshVI	ATCGAT	1 cut(s)	1107
BsiHKAI	GWGCWC	1 cut(s)	1317
BsiSI	CCGG	1 cut(s)	927
BslFI	GGGAC	3 cut(s)	1200, 1743, 3328
BslI	CCNNNNNNNGG	4 cut(s)	276, 901, 986, 2990
BsmAI	GTCTC	9 cut(s)	310, 518, 1922, 1931, 1974, 2175, 2502, 2572, 2888
BsmBI	CGTCTC	2 cut(s)	1931, 2888
BsmFI	GGGAC	3 cut(s)	1200, 1743, 3328
BsmI	GAATGC	1 cut(s)	825
BsnI	GGCC	9 cut(s)	57, 323, 510, 770, 2046, 2315, 2408, 3075, 3160
Bso31I	GGTCTC	2 cut(s)	2175, 2572
Bsp119I	TTCGAA	2 cut(s)	655, 3261
Bsp120I	GGGCCC	1 cut(s)	3073
Bsp1286I	GDGCHC	3 cut(s)	635, 1317, 3077
Bsp1407I	TGTACA	1 cut(s)	1422
Bsp1720I	GCTNAGC	1 cut(s)	2271
BspANI	GGCC	9 cut(s)	57, 323, 510, 770, 2046, 2315, 2408, 3075, 3160
BspCNI	CTCAG	8 cut(s)	84, 362, 509, 823, 1735, 1935, 2284, 2512
BspDI	ATCGAT	1 cut(s)	1107
BspHI	TCATGA	2 cut(s)	201, 1044
BspLI	GGNNCC	5 cut(s)	282, 493, 1222, 2575, 3075
BspMAI	CTGCAG	3 cut(s)	532, 2397, 2874
BspOI	GCTAGC	2 cut(s)	1812, 1844
BspPI	GGATC	4 cut(s)	1911, 2754, 2975, 2995
BspT104I	TTCGAA	2 cut(s)	655, 3261
BspT107I	GGYRCC	2 cut(s)	491, 1220
BspTNI	GGTCTC	2 cut(s)	2175, 2572
BsrDI	GCAATG	2 cut(s)	802, 968
BsrFI	RCCGGY	1 cut(s)	926
BsrGI	TGTACA	1 cut(s)	1422
BsrI	ACTGG	9 cut(s)	257, 796, 1222, 1332, 1981, 2577, 2625, 2969, 3041
BssAI	RCCGGY	1 cut(s)	926
BssECI	CCNNGG	5 cut(s)	324, 561, 992, 1183, 1551
BssNAI	GTATAC	2 cut(s)	3000, 3105
BssNI	GRCGYC	1 cut(s)	3317
BssT1I	CCWWGG	2 cut(s)	992, 1551
Bst1107I	GTATAC	2 cut(s)	3000, 3105
Bst2UI	CCWGG	4 cut(s)	325, 562, 1184, 2985
Bst4CI	ACNGT	9 cut(s)	122, 154, 603, 1366, 1387, 1529, 1537, 1743, 3342
Bst6I	CTCTTC	2 cut(s)	1023, 1764
BstACI	GRCGYC	1 cut(s)	3317
BstAPI	GCANNNNNTGC	1 cut(s)	308
BstAUI	TGTACA	1 cut(s)	1422
BstBAI	YACGTR	1 cut(s)	31
BstBI	TTCGAA	2 cut(s)	655, 3261
BstH2I	RGCGCY	1 cut(s)	2852
BstHHI	GCGC	2 cut(s)	418, 2851
BstMAI	GTCTC	9 cut(s)	310, 518, 1922, 1931, 1974, 2175, 2502, 2572, 2888
BstMWI	GCNNNNNNNGC	6 cut(s)	244, 308, 854, 1148, 2405, 2408
BstNI	CCWGG	4 cut(s)	325, 562, 1184, 2985
BstNSI	RCATGY	2 cut(s)	1674, 2804
BstPAI	GACNNNNGTC	1 cut(s)	563
BstSCI	CCNGG	4 cut(s)	323, 560, 1182, 2983
BstSFI	CTRYAG	7 cut(s)	528, 1533, 1910, 2302, 2393, 2870, 3134
BstSLI	GKGCMC	2 cut(s)	635, 3077
BstV1I	GCAGC	9 cut(s)	542, 1450, 1453, 1824, 2411, 2695, 2856, 2932, 3074
BstV2I	GAAGAC	4 cut(s)	73, 563, 1332, 2608
BstX2I	RGATCY	4 cut(s)	592, 2659, 2967, 3299
BstYI	RGATCY	4 cut(s)	592, 2659, 2967, 3299
BstZ17I	GTATAC	2 cut(s)	3000, 3105
Bsu15I	ATCGAT	1 cut(s)	1107
Bsu36I	CCTNAGG	1 cut(s)	2139
BsuI	GTATCC	1 cut(s)	937
BsuRI	GGCC	9 cut(s)	57, 323, 510, 770, 2046, 2315, 2408, 3075, 3160
BsuTUI	ATCGAT	1 cut(s)	1107
BtgZI	GCGATG	1 cut(s)	90
BtsI	GCAGTG	1 cut(s)	1992
BtsIMutI	CAGTG	8 cut(s)	150, 789, 1339, 1739, 1992, 2183, 2632, 2980
CaiI	CAGNNNCTG	1 cut(s)	308
CciI	TCATGA	2 cut(s)	201, 1044
CfoI	GCGC	2 cut(s)	418, 2851
Cfr10I	RCCGGY	1 cut(s)	926
Cfr13I	GGNCC	9 cut(s)	56, 281, 768, 989, 1180, 2406, 3073, 3074, 3158
ClaI	ATCGAT	1 cut(s)	1107
CseI	GACGC	3 cut(s)	1948, 2635, 3325
DraI	TTTAAA	1 cut(s)	2289
DriI	GACNNNNNGTC	1 cut(s)	1743
EaeI	YGGCCR	1 cut(s)	2313
Eam1104I	CTCTTC	2 cut(s)	1023, 1764
Eam1105I	GACNNNNNGTC	1 cut(s)	1743
EarI	CTCTTC	2 cut(s)	1023, 1764
Ecl136II	GAGCTC	1 cut(s)	1315
Eco130I	CCWWGG	2 cut(s)	992, 1551
Eco147I	AGGCCT	2 cut(s)	323, 510
Eco24I	GRGCYC	2 cut(s)	1317, 3077
Eco31I	GGTCTC	2 cut(s)	2175, 2572
Eco32I	GATATC	1 cut(s)	344
Eco47I	GGWCC	3 cut(s)	281, 989, 1180
Eco53kI	GAGCTC	1 cut(s)	1315
Eco57I	CTGAAG	8 cut(s)	218, 575, 722, 2094, 2115, 2207, 2956, 3082
Eco81I	CCTNAGG	1 cut(s)	2139
EcoICRI	GAGCTC	1 cut(s)	1315
EcoO109I	RGGNCCY	2 cut(s)	989, 1180
EcoRII	CCWGG	4 cut(s)	323, 560, 1182, 2983
EcoRV	GATATC	1 cut(s)	344
EcoT14I	CCWWGG	2 cut(s)	992, 1551
EcoT22I	ATGCAT	1 cut(s)	1672
EcoT38I	GRGCYC	2 cut(s)	1317, 3077
ErhI	CCWWGG	2 cut(s)	992, 1551
Esp3I	CGTCTC	2 cut(s)	1931, 2888
FalI	AAGNNNNNCTT	4 cut(s)	2034, 2066, 2259, 2291
FaqI	GGGAC	3 cut(s)	1200, 1743, 3328
FauI	CCCGC	4 cut(s)	444, 583, 2372, 2707
FauNDI	CATATG	1 cut(s)	1479
FbaI	TGATCA	1 cut(s)	2790
FblI	GTMKAC	2 cut(s)	2999, 3104
FriOI	GRGCYC	2 cut(s)	1317, 3077
GlaI	GCGC	2 cut(s)	417, 2850
GsaI	CCCAGC	2 cut(s)	48, 1474
GsuI	CTGGAG	4 cut(s)	240, 1131, 1583, 1998
HaeII	RGCGCY	1 cut(s)	2852
HaeIII	GGCC	9 cut(s)	57, 323, 510, 770, 2046, 2315, 2408, 3075, 3160
HapII	CCGG	1 cut(s)	927
HgaI	GACGC	3 cut(s)	1948, 2635, 3325
HhaI	GCGC	2 cut(s)	418, 2851
Hin1I	GRCGYC	1 cut(s)	3317
Hin6I	GCGC	2 cut(s)	416, 2849
HinP1I	GCGC	2 cut(s)	416, 2849
HincII	GTYRAC	1 cut(s)	873
HindII	GTYRAC	1 cut(s)	873
HindIII	AAGCTT	2 cut(s)	806, 839
HinfI	GANTC	8 cut(s)	69, 101, 205, 1652, 2695, 2728, 3079, 3278
HpaII	CCGG	1 cut(s)	927
HphI	GGTGA	1 cut(s)	3273
Hpy166II	GTNNAC	9 cut(s)	150, 284, 787, 873, 1423, 1569, 1760, 3000, 3105
Hpy8I	GTNNAC	9 cut(s)	150, 284, 787, 873, 1423, 1569, 1760, 3000, 3105
HpyCH4III	ACNGT	9 cut(s)	122, 154, 603, 1366, 1387, 1529, 1537, 1743, 3342
HpyCH4IV	ACGT	5 cut(s)	30, 1354, 2309, 2738, 3148
HpyF10VI	GCNNNNNNNGC	6 cut(s)	244, 308, 854, 1148, 2405, 2408
HpySE526I	ACGT	5 cut(s)	30, 1354, 2309, 2738, 3148
Hsp92I	GRCGYC	1 cut(s)	3317
HspAI	GCGC	2 cut(s)	416, 2849
KpnI	GGTACC	2 cut(s)	495, 1224
Ksp22I	TGATCA	1 cut(s)	2790
LmnI	GCTCC	4 cut(s)	878, 1312, 1643, 3177
Lsp1109I	GCAGC	9 cut(s)	542, 1450, 1453, 1824, 2411, 2695, 2856, 2932, 3074
LweI	GCATC	8 cut(s)	320, 405, 655, 844, 1312, 1438, 1959, 2695
MaeII	ACGT	5 cut(s)	30, 1354, 2309, 2738, 3148
MfeI	CAATTG	2 cut(s)	1932, 2775
MflI	RGATCY	4 cut(s)	592, 2659, 2967, 3299
MhlI	GDGCHC	3 cut(s)	635, 1317, 3077
MlsI	TGGCCA	1 cut(s)	2315
MluNI	TGGCCA	1 cut(s)	2315
MlyI	GAGTC	1 cut(s)	63
Mox20I	TGGCCA	1 cut(s)	2315
Mph1103I	ATGCAT	1 cut(s)	1672
MroXI	GAANNNNTTC	2 cut(s)	1656, 3095
MscI	TGGCCA	1 cut(s)	2315
MseI	TTAA	5 cut(s)	615, 716, 1062, 1301, 2288
MslI	CAYNNNNRTG	1 cut(s)	2805
Msp20I	TGGCCA	1 cut(s)	2315
MspA1I	CMGCKG	2 cut(s)	848, 2411
MspI	CCGG	1 cut(s)	927
MspR9I	CCNGG	4 cut(s)	325, 562, 1184, 2985
MunI	CAATTG	2 cut(s)	1932, 2775
Mva1269I	GAATGC	1 cut(s)	825
MvaI	CCWGG	4 cut(s)	325, 562, 1184, 2985
MwoI	GCNNNNNNNGC	6 cut(s)	244, 308, 854, 1148, 2405, 2408
NdeI	CATATG	1 cut(s)	1479
NheI	GCTAGC	2 cut(s)	1808, 1840
NlaIV	GGNNCC	5 cut(s)	282, 493, 1222, 2575, 3075
NmuCI	GTSAC	5 cut(s)	122, 473, 1610, 2251, 2297
NsiI	ATGCAT	1 cut(s)	1672
NspI	RCATGY	2 cut(s)	1674, 2804
NspV	TTCGAA	2 cut(s)	655, 3261
PagI	TCATGA	2 cut(s)	201, 1044
PceI	AGGCCT	2 cut(s)	323, 510
PctI	GAATGC	1 cut(s)	825
PdmI	GAANNNNTTC	2 cut(s)	1656, 3095
PfeI	GAWTC	7 cut(s)	101, 205, 1652, 2695, 2728, 3079, 3278
PflFI	GACNNNGTC	1 cut(s)	1079
PflMI	CCANNNNNTGG	2 cut(s)	276, 901
PfoI	TCCNGGA	1 cut(s)	2983
PleI	GAGTC	1 cut(s)	63
PpsI	GAGTC	1 cut(s)	63
Ppu21I	YACGTR	1 cut(s)	31
PpuMI	RGGWCCY	2 cut(s)	989, 1180
PshAI	GACNNNNGTC	1 cut(s)	563
PsiI	TTATAA	1 cut(s)	2610
Psp124BI	GAGCTC	1 cut(s)	1317
Psp1406I	AACGTT	2 cut(s)	2309, 3148
Psp5II	RGGWCCY	2 cut(s)	989, 1180
Psp6I	CCWGG	4 cut(s)	323, 560, 1182, 2983
PspFI	CCCAGC	2 cut(s)	44, 1470
PspGI	CCWGG	4 cut(s)	323, 560, 1182, 2983
PspN4I	GGNNCC	5 cut(s)	282, 493, 1222, 2575, 3075
PspOMI	GGGCCC	1 cut(s)	3073
PspPI	GGNCC	9 cut(s)	56, 281, 768, 989, 1180, 2406, 3073, 3074, 3158
PspPPI	RGGWCCY	2 cut(s)	989, 1180
PstI	CTGCAG	3 cut(s)	532, 2397, 2874
PstNI	CAGNNNCTG	1 cut(s)	308
PsuI	RGATCY	4 cut(s)	592, 2659, 2967, 3299
PsyI	GACNNNGTC	1 cut(s)	1079
PvuII	CAGCTG	1 cut(s)	848
RseI	CAYNNNNRTG	1 cut(s)	2805
SacI	GAGCTC	1 cut(s)	1317
SaqAI	TTAA	5 cut(s)	615, 716, 1062, 1301, 2288
Sau96I	GGNCC	9 cut(s)	56, 281, 768, 989, 1180, 2406, 3073, 3074, 3158
ScaI	AGTACT	2 cut(s)	212, 3095
SchI	GAGTC	1 cut(s)	63
ScrFI	CCNGG	4 cut(s)	325, 562, 1184, 2985
SduI	GDGCHC	3 cut(s)	635, 1317, 3077
SfaNI	GCATC	8 cut(s)	320, 405, 655, 844, 1312, 1438, 1959, 2695
SfcI	CTRYAG	7 cut(s)	528, 1533, 1910, 2302, 2393, 2870, 3134
SfuI	TTCGAA	2 cut(s)	655, 3261
SinI	GGWCC	3 cut(s)	281, 989, 1180
SmiMI	CAYNNNNRTG	1 cut(s)	2805
SmlI	CTYRAG	3 cut(s)	1437, 1511, 3367
SmoI	CTYRAG	3 cut(s)	1437, 1511, 3367
SseBI	AGGCCT	2 cut(s)	323, 510
SspI	AATATT	2 cut(s)	1718, 2223
SstI	GAGCTC	1 cut(s)	1317
StuI	AGGCCT	2 cut(s)	323, 510
StyD4I	CCNGG	4 cut(s)	323, 560, 1182, 2983
StyI	CCWWGG	2 cut(s)	992, 1551
TaaI	ACNGT	9 cut(s)	122, 154, 603, 1366, 1387, 1529, 1537, 1743, 3342
TaiI	ACGT	5 cut(s)	33, 1357, 2312, 2741, 3151
TaqI	TCGA	4 cut(s)	655, 1107, 1780, 3261
TaqII	GACCGA	1 cut(s)	1146
TatI	WGTACW	5 cut(s)	147, 210, 1197, 1422, 3093
TauI	GCSGC	3 cut(s)	78, 198, 2411
TfiI	GAWTC	7 cut(s)	101, 205, 1652, 2695, 2728, 3079, 3278
Tru1I	TTAA	5 cut(s)	615, 716, 1062, 1301, 2288
Tru9I	TTAA	5 cut(s)	615, 716, 1062, 1301, 2288
TscAI	CASTG	8 cut(s)	157, 796, 1339, 1746, 1999, 2190, 2632, 2980
TseFI	GTSAC	5 cut(s)	122, 473, 1610, 2251, 2297
TseI	GCWGC	9 cut(s)	530, 1463, 1466, 1812, 2399, 2683, 2869, 2945, 3062
Tsp45I	GTSAC	5 cut(s)	122, 473, 1610, 2251, 2297
TspGWI	ACGGA	2 cut(s)	1244, 1750
TspRI	CASTG	8 cut(s)	157, 796, 1339, 1746, 1999, 2190, 2632, 2980
Tth111I	GACNNNGTC	1 cut(s)	1079
Van91I	CCANNNNNTGG	2 cut(s)	276, 901
VpaK11BI	GGWCC	3 cut(s)	281, 989, 1180
XapI	RAATTY	3 cut(s)	175, 1520, 2938
XceI	RCATGY	2 cut(s)	1674, 2804
XmiI	GTMKAC	2 cut(s)	2999, 3104
XmnI	GAANNNNTTC	2 cut(s)	1656, 3095
ZrmI	AGTACT	2 cut(s)	212, 3095
Zsp2I	ATGCAT	1 cut(s)	1672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.