No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0229181 |
| rosa_laevigata | RLG00000001750 |
| rosa_multiflora | Rmu_co8290967.1_g000001 Rmu_co8475629.1_g000002 Rmu_sc0000693.1_g000013 Rmu_sc0007720.1_g000003 Rmu_sc0007720.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00230680 Rroxscaffold_3G00230690 |
| rosa_samantha | Rh7DG402200 |
| rosa_wichuraiana | Rw7G032140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 248 |
| AciI | CCGC | 9 cut(s) | 16, 226, 246, 366, 696, 766, 1026, 1096, 1126 |
| AcuI | CTGAAG | 7 cut(s) | 348, 498, 588, 678, 918, 1158, 1248 |
| AgsI | TTSAA | 2 cut(s) | 319, 989 |
| ApeKI | GCWGC | 1 cut(s) | 1355 |
| BanII | GRGCYC | 2 cut(s) | 778, 1108 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 17, 51, 437, 471 |
| BfmI | CTRYAG | 6 cut(s) | 126, 456, 666, 786, 996, 1116 |
| BglI | GCCNNNNNGGC | 6 cut(s) | 44, 164, 374, 704, 1034, 1244 |
| BisI | GCNGC | 1 cut(s) | 1356 |
| BlsI | GCNGC | 1 cut(s) | 1357 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 75, 107 |
| BpuEI | CTTGAG | 1 cut(s) | 234 |
| BsaI | GGTCTC | 7 cut(s) | 236, 356, 513, 686, 843, 1016, 1173 |
| BseMII | CTCAG | 7 cut(s) | 51, 261, 381, 524, 854, 1184, 1251 |
| BsmBI | CGTCTC | 6 cut(s) | 78, 288, 348, 408, 1278, 1310 |
| Bso31I | GGTCTC | 7 cut(s) | 236, 356, 513, 686, 843, 1016, 1173 |
| Bsp1286I | GDGCHC | 2 cut(s) | 778, 1108 |
| BspACI | CCGC | 9 cut(s) | 16, 226, 246, 366, 696, 766, 1026, 1096, 1126 |
| BspCNI | CTCAG | 7 cut(s) | 52, 262, 382, 523, 853, 1183, 1252 |
| BspMAI | CTGCAG | 5 cut(s) | 460, 670, 790, 1000, 1120 |
| BspTNI | GGTCTC | 7 cut(s) | 236, 356, 513, 686, 843, 1016, 1173 |
| BsrBI | CCGCTC | 1 cut(s) | 248 |
| BstC8I | GCNNGC | 6 cut(s) | 546, 636, 876, 966, 1206, 1296 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 44, 164, 254, 374, 704, 1034, 1244 |
| BstSFI | CTRYAG | 6 cut(s) | 126, 456, 666, 786, 996, 1116 |
| Cac8I | GCNNGC | 6 cut(s) | 546, 636, 876, 966, 1206, 1296 |
| CviAII | CATG | 1 cut(s) | 911 |
| Eco24I | GRGCYC | 2 cut(s) | 778, 1108 |
| Eco31I | GGTCTC | 7 cut(s) | 236, 356, 513, 686, 843, 1016, 1173 |
| Eco57I | CTGAAG | 7 cut(s) | 348, 498, 588, 678, 918, 1158, 1248 |
| EcoT38I | GRGCYC | 2 cut(s) | 778, 1108 |
| Esp3I | CGTCTC | 6 cut(s) | 78, 288, 348, 408, 1278, 1310 |
| FaeI | CATG | 1 cut(s) | 914 |
| FaiI | YATR | 2 cut(s) | 912, 1184 |
| FatI | CATG | 1 cut(s) | 910 |
| Fnu4HI | GCNGC | 1 cut(s) | 1356 |
| FriOI | GRGCYC | 2 cut(s) | 778, 1108 |
| Fsp4HI | GCNGC | 1 cut(s) | 1356 |
| GluI | GCNGC | 1 cut(s) | 1356 |
| Hin1II | CATG | 1 cut(s) | 914 |
| HinfI | GANTC | 1 cut(s) | 496 |
| Hpy188III | TCNNGA | 6 cut(s) | 193, 251, 512, 842, 1063, 1172 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 44, 164, 254, 374, 704, 1034, 1244 |
| Hsp92II | CATG | 1 cut(s) | 914 |
| LpnPI | CCDG | 6 cut(s) | 92, 206, 497, 827, 1076, 1157 |
| MbiI | CCGCTC | 1 cut(s) | 248 |
| MhlI | GDGCHC | 2 cut(s) | 778, 1108 |
| MluCI | AATT | 1 cut(s) | 305 |
| MlyI | GAGTC | 1 cut(s) | 490 |
| MmeI | TCCRAC | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 44, 164, 254, 374, 704, 1034, 1244 |
| NlaIII | CATG | 1 cut(s) | 914 |
| PkrI | GCNGC | 1 cut(s) | 1357 |
| PleI | GAGTC | 1 cut(s) | 490 |
| PpsI | GAGTC | 1 cut(s) | 490 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 556, 588, 1216, 1248 |
| PstI | CTGCAG | 5 cut(s) | 460, 670, 790, 1000, 1120 |
| SatI | GCNGC | 1 cut(s) | 1356 |
| SchI | GAGTC | 1 cut(s) | 490 |
| SduI | GDGCHC | 2 cut(s) | 778, 1108 |
| SfcI | CTRYAG | 6 cut(s) | 126, 456, 666, 786, 996, 1116 |
| SmlI | CTYRAG | 1 cut(s) | 249 |
| SmoI | CTYRAG | 1 cut(s) | 249 |
| Sse9I | AATT | 1 cut(s) | 305 |
| SsiI | CCGC | 9 cut(s) | 16, 226, 246, 366, 696, 766, 1026, 1096, 1126 |
| TasI | AATT | 1 cut(s) | 305 |
| TseI | GCWGC | 1 cut(s) | 1355 |
| TspGWI | ACGGA | 3 cut(s) | 151, 451, 991 |