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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g33320 FvH4_5g33320 FvH4_5g33320 FvH4_5g33320 FvH4_5g33320 FvH4_5g33320 |
| malus_domestica | MD15G1395700.v1.1 |
| prunus_persica | Prupe.1G544900_v2.0.a1 Prupe.1G544900_v2.0.a1 Prupe.1G544900_v2.0.a1 |
| pyrus_communis | pycom15g35630 |
| rosa_chinensis | RchiOBHm_Chr7g0232051 |
| rosa_laevigata | RLG00000001397 |
| rosa_multiflora | Rmu_sc0004618.1_g000018 Rmu_sc0009837.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00228860 Rroxscaffold_3G00242020 Rroxscaffold_4G00331070 |
| rosa_rugosa | Rorug07G0268700 |
| rosa_samantha | Rh7AG423100 Rh7BG397300 Rh7CG443500 Rh7DG415400 |
| rosa_wichuraiana | Rw0G010280 Rw7G035000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 216 |
| AccI | GTMKAC | 3 cut(s) | 588, 1024, 1208 |
| AccIII | TCCGGA | 1 cut(s) | 1409 |
| AciI | CCGC | 2 cut(s) | 292, 1004 |
| AclWI | GGATC | 3 cut(s) | 69, 1228, 1325 |
| AcsI | RAATTY | 3 cut(s) | 298, 1198, 1372 |
| AcuI | CTGAAG | 3 cut(s) | 906, 1266, 1439 |
| AfaI | GTAC | 4 cut(s) | 164, 400, 891, 1318 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 193, 575, 641, 1409 |
| AflIII | ACRYGT | 2 cut(s) | 286, 1319 |
| AgeI | ACCGGT | 2 cut(s) | 568, 634 |
| AgsI | TTSAA | 5 cut(s) | 439, 754, 1059, 1087, 1378 |
| AjnI | CCWGG | 1 cut(s) | 1117 |
| Alw21I | GWGCWC | 2 cut(s) | 156, 232 |
| Alw26I | GTCTC | 1 cut(s) | 682 |
| AlwI | GGATC | 3 cut(s) | 69, 1228, 1325 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 362 |
| Aor13HI | TCCGGA | 1 cut(s) | 1409 |
| AoxI | GGCC | 1 cut(s) | 1414 |
| ApeKI | GCWGC | 3 cut(s) | 92, 669, 836 |
| ApoI | RAATTY | 3 cut(s) | 298, 1198, 1372 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 127, 159, 1155, 1187, 1190, 1222 |
| AsiGI | ACCGGT | 2 cut(s) | 568, 634 |
| AspS9I | GGNCC | 2 cut(s) | 1110, 1407 |
| AsuHPI | GGTGA | 1 cut(s) | 419 |
| AsuII | TTCGAA | 1 cut(s) | 1430 |
| AvaII | GGWCC | 2 cut(s) | 1110, 1407 |
| BanII | GRGCYC | 2 cut(s) | 156, 232 |
| Bbv12I | GWGCWC | 2 cut(s) | 156, 232 |
| BbvI | GCAGC | 3 cut(s) | 79, 681, 823 |
| BccI | CCATC | 1 cut(s) | 952 |
| BciT130I | CCWGG | 1 cut(s) | 1119 |
| BclI | TGATCA | 1 cut(s) | 967 |
| BcoDI | GTCTC | 1 cut(s) | 682 |
| BfaI | CTAG | 4 cut(s) | 45, 327, 813, 1100 |
| BfmI | CTRYAG | 2 cut(s) | 454, 1395 |
| BisI | GCNGC | 3 cut(s) | 93, 670, 837 |
| BlsI | GCNGC | 3 cut(s) | 94, 671, 838 |
| Bme1390I | CCNGG | 1 cut(s) | 1119 |
| Bme18I | GGWCC | 2 cut(s) | 1110, 1407 |
| BmgT120I | GGNCC | 2 cut(s) | 1110, 1407 |
| BmiI | GGNNCC | 2 cut(s) | 942, 1438 |
| BmrFI | CCNGG | 1 cut(s) | 1119 |
| BmsI | GCATC | 4 cut(s) | 262, 265, 355, 1149 |
| BpmI | CTGGAG | 2 cut(s) | 880, 1140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 738 |
| Bpu14I | TTCGAA | 1 cut(s) | 1430 |
| BpuEI | CTTGAG | 1 cut(s) | 218 |
| Bsa29I | ATCGAT | 1 cut(s) | 139 |
| BsaAI | YACGTR | 1 cut(s) | 872 |
| BsaJI | CCNNGG | 2 cut(s) | 1403, 1440 |
| BsaWI | WCCGGW | 3 cut(s) | 568, 634, 1409 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 193, 575, 641, 1409 |
| Bse118I | RCCGGY | 3 cut(s) | 485, 568, 634 |
| Bse1I | ACTGG | 2 cut(s) | 897, 1077 |
| Bse3DI | GCAATG | 2 cut(s) | 239, 454 |
| BseAI | TCCGGA | 1 cut(s) | 1409 |
| BseBI | CCWGG | 1 cut(s) | 1119 |
| BseCI | ATCGAT | 1 cut(s) | 139 |
| BseDI | CCNNGG | 2 cut(s) | 1403, 1440 |
| BseGI | GGATG | 2 cut(s) | 300, 913 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 193, 575, 641, 1409 |
| BseMI | GCAATG | 2 cut(s) | 239, 454 |
| BseMII | CTCAG | 4 cut(s) | 6, 47, 87, 1173 |
| BseNI | ACTGG | 2 cut(s) | 897, 1077 |
| BseRI | GAGGAG | 3 cut(s) | 164, 221, 1314 |
| BseXI | GCAGC | 3 cut(s) | 79, 681, 823 |
| Bsh1285I | CGRYCG | 3 cut(s) | 511, 573, 639 |
| BshFI | GGCC | 1 cut(s) | 1416 |
| BshTI | ACCGGT | 2 cut(s) | 568, 634 |
| BshVI | ATCGAT | 1 cut(s) | 139 |
| BsiEI | CGRYCG | 3 cut(s) | 511, 573, 639 |
| BsiHKAI | GWGCWC | 2 cut(s) | 156, 232 |
| BsiSI | CCGG | 4 cut(s) | 486, 569, 635, 1410 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 193, 575, 641, 1409 |
| BsmAI | GTCTC | 1 cut(s) | 682 |
| BsnI | GGCC | 1 cut(s) | 1416 |
| Bsp119I | TTCGAA | 1 cut(s) | 1430 |
| Bsp1286I | GDGCHC | 2 cut(s) | 156, 232 |
| Bsp13I | TCCGGA | 1 cut(s) | 1409 |
| Bsp1407I | TGTACA | 1 cut(s) | 162 |
| Bsp143I | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| BspACI | CCGC | 2 cut(s) | 292, 1004 |
| BspANI | GGCC | 1 cut(s) | 1416 |
| BspCNI | CTCAG | 4 cut(s) | 7, 46, 88, 1174 |
| BspDI | ATCGAT | 1 cut(s) | 139 |
| BspEI | TCCGGA | 1 cut(s) | 1409 |
| BspLI | GGNNCC | 2 cut(s) | 942, 1438 |
| BspMAI | CTGCAG | 1 cut(s) | 1399 |
| BspPI | GGATC | 3 cut(s) | 69, 1228, 1325 |
| BspT104I | TTCGAA | 1 cut(s) | 1430 |
| BsrDI | GCAATG | 2 cut(s) | 239, 454 |
| BsrFI | RCCGGY | 3 cut(s) | 485, 568, 634 |
| BsrGI | TGTACA | 1 cut(s) | 162 |
| BsrI | ACTGG | 2 cut(s) | 897, 1077 |
| BssAI | RCCGGY | 3 cut(s) | 485, 568, 634 |
| BssECI | CCNNGG | 2 cut(s) | 1403, 1440 |
| BssMI | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| BssT1I | CCWWGG | 1 cut(s) | 1440 |
| Bst2UI | CCWGG | 1 cut(s) | 1119 |
| Bst4CI | ACNGT | 5 cut(s) | 403, 472, 1256, 1316, 1407 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 365 |
| BstAUI | TGTACA | 1 cut(s) | 162 |
| BstBAI | YACGTR | 1 cut(s) | 872 |
| BstBI | TTCGAA | 1 cut(s) | 1430 |
| BstC8I | GCNNGC | 2 cut(s) | 105, 280 |
| BstDEI | CTNAG | 5 cut(s) | 15, 33, 96, 738, 1182 |
| BstDSI | CCRYGG | 1 cut(s) | 1403 |
| BstF5I | GGATG | 2 cut(s) | 300, 913 |
| BstKTI | GATC | 4 cut(s) | 64, 970, 1236, 1333 |
| BstMAI | GTCTC | 1 cut(s) | 682 |
| BstMBI | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| BstMCI | CGRYCG | 3 cut(s) | 511, 573, 639 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 236, 250, 365, 419 |
| BstNI | CCWGG | 1 cut(s) | 1119 |
| BstNSI | RCATGY | 2 cut(s) | 290, 1323 |
| BstSCI | CCNGG | 1 cut(s) | 1117 |
| BstSFI | CTRYAG | 2 cut(s) | 454, 1395 |
| BstV1I | GCAGC | 3 cut(s) | 79, 681, 823 |
| BstX2I | RGATCY | 1 cut(s) | 1330 |
| BstYI | RGATCY | 1 cut(s) | 1330 |
| Bsu15I | ATCGAT | 1 cut(s) | 139 |
| BsuRI | GGCC | 1 cut(s) | 1416 |
| BsuTUI | ATCGAT | 1 cut(s) | 139 |
| BtgI | CCRYGG | 1 cut(s) | 1403 |
| BtsCI | GGATG | 2 cut(s) | 300, 913 |
| BtsIMutI | CAGTG | 3 cut(s) | 408, 904, 1084 |
| Cac8I | GCNNGC | 2 cut(s) | 105, 280 |
| CaiI | CAGNNNCTG | 1 cut(s) | 362 |
| Cfr10I | RCCGGY | 3 cut(s) | 485, 568, 634 |
| Cfr13I | GGNCC | 2 cut(s) | 1110, 1407 |
| ClaI | ATCGAT | 1 cut(s) | 139 |
| CpoI | CGGWCCG | 1 cut(s) | 1407 |
| CseI | GACGC | 1 cut(s) | 1344 |
| Csp6I | GTAC | 4 cut(s) | 163, 399, 890, 1317 |
| CspAI | ACCGGT | 2 cut(s) | 568, 634 |
| CspI | CGGWCCG | 1 cut(s) | 1407 |
| CviAII | CATG | 7 cut(s) | 65, 287, 304, 527, 665, 1204, 1320 |
| CviQI | GTAC | 4 cut(s) | 163, 399, 890, 1317 |
| DdeI | CTNAG | 5 cut(s) | 15, 33, 96, 738, 1182 |
| DpnI | GATC | 4 cut(s) | 63, 969, 1235, 1332 |
| DpnII | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| DraI | TTTAAA | 1 cut(s) | 732 |
| EciI | GGCGGA | 1 cut(s) | 1019 |
| Ecl136II | GAGCTC | 2 cut(s) | 154, 230 |
| Eco130I | CCWWGG | 1 cut(s) | 1440 |
| Eco147I | AGGCCT | 1 cut(s) | 1416 |
| Eco24I | GRGCYC | 2 cut(s) | 156, 232 |
| Eco32I | GATATC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 2 cut(s) | 1110, 1407 |
| Eco53kI | GAGCTC | 2 cut(s) | 154, 230 |
| Eco57I | CTGAAG | 3 cut(s) | 906, 1266, 1439 |
| EcoICRI | GAGCTC | 2 cut(s) | 154, 230 |
| EcoRI | GAATTC | 1 cut(s) | 298 |
| EcoRII | CCWGG | 1 cut(s) | 1117 |
| EcoRV | GATATC | 1 cut(s) | 75 |
| EcoT14I | CCWWGG | 1 cut(s) | 1440 |
| EcoT38I | GRGCYC | 2 cut(s) | 156, 232 |
| ErhI | CCWWGG | 1 cut(s) | 1440 |
| FaeI | CATG | 7 cut(s) | 68, 290, 307, 530, 668, 1207, 1323 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 185, 217 |
| FatI | CATG | 7 cut(s) | 64, 286, 303, 526, 664, 1203, 1319 |
| FbaI | TGATCA | 1 cut(s) | 967 |
| FblI | GTMKAC | 3 cut(s) | 588, 1024, 1208 |
| Fnu4HI | GCNGC | 3 cut(s) | 93, 670, 837 |
| FokI | GGATG | 2 cut(s) | 307, 900 |
| FriOI | GRGCYC | 2 cut(s) | 156, 232 |
| Fsp4HI | GCNGC | 3 cut(s) | 93, 670, 837 |
| FspBI | CTAG | 4 cut(s) | 45, 327, 813, 1100 |
| GluI | GCNGC | 3 cut(s) | 93, 670, 837 |
| GsuI | CTGGAG | 2 cut(s) | 880, 1140 |
| HaeIII | GGCC | 1 cut(s) | 1416 |
| HapII | CCGG | 4 cut(s) | 486, 569, 635, 1410 |
| HgaI | GACGC | 1 cut(s) | 1344 |
| Hin1II | CATG | 7 cut(s) | 68, 290, 307, 530, 668, 1207, 1323 |
| HincII | GTYRAC | 5 cut(s) | 26, 589, 1025, 1154, 1209 |
| HindII | GTYRAC | 5 cut(s) | 26, 589, 1025, 1154, 1209 |
| HinfI | GANTC | 6 cut(s) | 98, 383, 431, 851, 930, 1051 |
| HpaII | CCGG | 4 cut(s) | 486, 569, 635, 1410 |
| HphI | GGTGA | 1 cut(s) | 419 |
| Hpy166II | GTNNAC | 5 cut(s) | 26, 589, 1025, 1154, 1209 |
| Hpy188I | TCNGA | 9 cut(s) | 250, 382, 682, 935, 1050, 1141, 1183, 1238, 1368 |
| Hpy188III | TCNNGA | 7 cut(s) | 35, 59, 146, 257, 1059, 1100, 1410 |
| Hpy8I | GTNNAC | 5 cut(s) | 26, 589, 1025, 1154, 1209 |
| HpyAV | CCTTC | 6 cut(s) | 187, 927, 1065, 1081, 1146, 1426 |
| HpyCH4III | ACNGT | 5 cut(s) | 403, 472, 1256, 1316, 1407 |
| HpyCH4IV | ACGT | 1 cut(s) | 871 |
| HpyCH4V | TGCA | 7 cut(s) | 244, 307, 368, 447, 839, 1387, 1397 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 236, 250, 365, 419 |
| HpyF3I | CTNAG | 5 cut(s) | 15, 33, 96, 738, 1182 |
| HpySE526I | ACGT | 1 cut(s) | 871 |
| Hsp92II | CATG | 7 cut(s) | 68, 290, 307, 530, 668, 1207, 1323 |
| Kpn2I | TCCGGA | 1 cut(s) | 1409 |
| Ksp22I | TGATCA | 1 cut(s) | 967 |
| Kzo9I | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| LmnI | GCTCC | 3 cut(s) | 151, 899, 1260 |
| Lsp1109I | GCAGC | 3 cut(s) | 79, 681, 823 |
| LweI | GCATC | 4 cut(s) | 262, 265, 355, 1149 |
| MaeI | CTAG | 4 cut(s) | 45, 327, 813, 1100 |
| MaeII | ACGT | 1 cut(s) | 871 |
| MaeIII | GTNAC | 2 cut(s) | 370, 472 |
| MalI | GATC | 4 cut(s) | 63, 969, 1235, 1332 |
| MboI | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| MboII | GAAGA | 7 cut(s) | 96, 378, 513, 528, 594, 797, 800 |
| MflI | RGATCY | 1 cut(s) | 1330 |
| MhlI | GDGCHC | 2 cut(s) | 156, 232 |
| MluCI | AATT | 8 cut(s) | 298, 308, 322, 1071, 1198, 1267, 1308, 1372 |
| MlyI | GAGTC | 2 cut(s) | 107, 440 |
| MnlI | CCTC | 9 cut(s) | 142, 199, 877, 931, 1288, 1292, 1297, 1351, 1406 |
| MroI | TCCGGA | 1 cut(s) | 1409 |
| MseI | TTAA | 3 cut(s) | 731, 1311, 1447 |
| MslI | CAYNNNNRTG | 1 cut(s) | 830 |
| MspI | CCGG | 4 cut(s) | 486, 569, 635, 1410 |
| MspR9I | CCNGG | 1 cut(s) | 1119 |
| MvaI | CCWGG | 1 cut(s) | 1119 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 236, 250, 365, 419 |
| NdeII | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| NlaIII | CATG | 7 cut(s) | 68, 290, 307, 530, 668, 1207, 1323 |
| NlaIV | GGNNCC | 2 cut(s) | 942, 1438 |
| NmuCI | GTSAC | 1 cut(s) | 472 |
| NspI | RCATGY | 2 cut(s) | 290, 1323 |
| NspV | TTCGAA | 1 cut(s) | 1430 |
| PceI | AGGCCT | 1 cut(s) | 1416 |
| PciI | ACATGT | 2 cut(s) | 286, 1319 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 136, 1021 |
| PfeI | GAWTC | 4 cut(s) | 383, 851, 930, 1051 |
| PflFI | GACNNNGTC | 1 cut(s) | 686 |
| PfoI | TCCNGGA | 1 cut(s) | 1117 |
| PinAI | ACCGGT | 2 cut(s) | 568, 634 |
| PkrI | GCNGC | 3 cut(s) | 94, 671, 838 |
| PleI | GAGTC | 2 cut(s) | 106, 439 |
| PpsI | GAGTC | 2 cut(s) | 106, 439 |
| Ppu21I | YACGTR | 1 cut(s) | 872 |
| PscI | ACATGT | 2 cut(s) | 286, 1319 |
| PsiI | TTATAA | 1 cut(s) | 216 |
| Psp124BI | GAGCTC | 2 cut(s) | 156, 232 |
| Psp6I | CCWGG | 1 cut(s) | 1117 |
| PspGI | CCWGG | 1 cut(s) | 1117 |
| PspN4I | GGNNCC | 2 cut(s) | 942, 1438 |
| PspPI | GGNCC | 2 cut(s) | 1110, 1407 |
| PstI | CTGCAG | 1 cut(s) | 1399 |
| PstNI | CAGNNNCTG | 1 cut(s) | 362 |
| PsuI | RGATCY | 1 cut(s) | 1330 |
| PsyI | GACNNNGTC | 1 cut(s) | 686 |
| RsaI | GTAC | 4 cut(s) | 164, 400, 891, 1318 |
| RsaNI | GTAC | 4 cut(s) | 163, 399, 890, 1317 |
| RseI | CAYNNNNRTG | 1 cut(s) | 830 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1407 |
| RsrII | CGGWCCG | 1 cut(s) | 1407 |
| SacI | GAGCTC | 2 cut(s) | 156, 232 |
| SalI | GTCGAC | 3 cut(s) | 587, 1023, 1207 |
| SaqAI | TTAA | 3 cut(s) | 731, 1311, 1447 |
| SatI | GCNGC | 3 cut(s) | 93, 670, 837 |
| Sau3AI | GATC | 4 cut(s) | 61, 967, 1233, 1330 |
| Sau96I | GGNCC | 2 cut(s) | 1110, 1407 |
| SchI | GAGTC | 2 cut(s) | 107, 440 |
| ScrFI | CCNGG | 1 cut(s) | 1119 |
| SduI | GDGCHC | 2 cut(s) | 156, 232 |
| SfaNI | GCATC | 4 cut(s) | 262, 265, 355, 1149 |
| SfcI | CTRYAG | 2 cut(s) | 454, 1395 |
| SfuI | TTCGAA | 1 cut(s) | 1430 |
| SinI | GGWCC | 2 cut(s) | 1110, 1407 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 830 |
| SmlI | CTYRAG | 1 cut(s) | 233 |
| SmoI | CTYRAG | 1 cut(s) | 233 |
| Sse9I | AATT | 8 cut(s) | 298, 308, 322, 1071, 1198, 1267, 1308, 1372 |
| SseBI | AGGCCT | 1 cut(s) | 1416 |
| SsiI | CCGC | 2 cut(s) | 292, 1004 |
| SspI | AATATT | 1 cut(s) | 1216 |
| SspMI | CTAG | 4 cut(s) | 45, 327, 813, 1100 |
| SstI | GAGCTC | 2 cut(s) | 156, 232 |
| StuI | AGGCCT | 1 cut(s) | 1416 |
| StyD4I | CCNGG | 1 cut(s) | 1117 |
| StyI | CCWWGG | 1 cut(s) | 1440 |
| TaaI | ACNGT | 5 cut(s) | 403, 472, 1256, 1316, 1407 |
| TaiI | ACGT | 1 cut(s) | 874 |
| TaqII | GACCGA | 1 cut(s) | 525 |
| TasI | AATT | 8 cut(s) | 298, 308, 322, 1071, 1198, 1267, 1308, 1372 |
| TatI | WGTACW | 3 cut(s) | 162, 398, 1316 |
| TfiI | GAWTC | 4 cut(s) | 383, 851, 930, 1051 |
| Tru1I | TTAA | 3 cut(s) | 731, 1311, 1447 |
| Tru9I | TTAA | 3 cut(s) | 731, 1311, 1447 |
| TscAI | CASTG | 3 cut(s) | 408, 904, 1084 |
| TseFI | GTSAC | 1 cut(s) | 472 |
| TseI | GCWGC | 3 cut(s) | 92, 669, 836 |
| Tsp45I | GTSAC | 1 cut(s) | 472 |
| TspDTI | ATGAA | 3 cut(s) | 311, 495, 1022 |
| TspGWI | ACGGA | 2 cut(s) | 607, 1123 |
| TspRI | CASTG | 3 cut(s) | 408, 904, 1084 |
| Tth111I | GACNNNGTC | 1 cut(s) | 686 |
| VpaK11BI | GGWCC | 2 cut(s) | 1110, 1407 |
| XapI | RAATTY | 3 cut(s) | 298, 1198, 1372 |
| XbaI | TCTAGA | 1 cut(s) | 1099 |
| XceI | RCATGY | 2 cut(s) | 290, 1323 |
| XmiI | GTMKAC | 3 cut(s) | 588, 1024, 1208 |
| XspI | CTAG | 4 cut(s) | 45, 327, 813, 1100 |