AT1G01140

CBL-interacting serine threonine-protein kinase 9-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
64166 .. 67774
3609 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01140.3

Sequence Viewer

Length: 1344 bp
ATGAGTGGAAGCAGAAGGAAGGCGACGCCGGCGAGTAGGACGCGAGTAGGGAATTACGAGATGGGACGAACTCTCGGAGAAGGAAGCTTCGCTAAGGTGAAATACGCCAAGAACACCGTCACCGGAGATCAAGCCGCTATCAAAATCCTCGACCGAGAAAAGGTCTTCCGTCACAAAATGGTCGAACAGCTTAAAAGAGAAATATCTACAATGAAACTGATTAAACATCCAAATGTGGTTGAAATCATTGAGGTTATGGCGAGCAAAACGAAGATCTATATCGTTCTTGAGCTTGTCAATGGAGGTGAACTCTTTGATAAAATCGCGCAACAAGGGAGGCTTAAGGAGGATGAAGCTCGGAGATATTTTCAGCAGCTCATCAATGCTGTGGATTACTGCCACAGTCGAGGTGTCTACCACAGAGATCTCAAGCCTGAAAATCTGATCCTTGACGCAAATGGGGTTTTGAAAGTCTCTGATTTTGGGTTAAGCGCCTTCTCACGACAAGTTCGGGAAGATGGTTTGCTTCATACAGCTTGTGGAACGCCAAACTACGTTGCCCCTGAGGTTTTGTCGGACAAAGGCTATGACGGTGCAGCAGCAGATGTCTGGTCTTGTGGTGTCATTCTCTTTGTGCTTATGGCTGGTTACTTGCCTTTTGATGAGCCGAATCTCATGACATTATACAAACGTATATGCAAGGCTGAGTTTAGCTGCCCACCATGGTTCTCGCAAGGTGCCAAGAGAGTCATCAAGCGTATTCTCGAACCCAACCCTATTACCAGAATAAGTATTGCAGAGTTGCTCGAAGATGAATGGTTCAAGAAAGGGTACAAGCCGCCATCATTTGACCAAGATGACGAGGACATAACCATAGATGATGTTGATGCTGCTTTTAGTAACTCCAAGGAATGTCTTGTAACTGAGAAGAAGGAGAAACCTGTATCCATGAACGCTTTCGAACTTATCTCTAGCTCAAGCGAGTTCAGTCTTGAAAACTTGTTCGAGAAGCAAGCGCAACTTGTGAAGAAAGAAACGCGGTTTACTTCTCAACGATCTGCGAGTGAAATAATGTCGAAAATGGAAGAAACCGCAAAGCCATTAGGCTTTAATGTCCGTAAAGACAACTACAAGATAAAAATGAAAGGAGACAAAAGTGGTCGTAAAGGTCAGCTCTCCGTAGCTACAGAGGTGTTTGAAGTGGCGCCATCATTGCATGTGGTAGAGCTTAGGAAAACCGGTGGTGATACCCTCGAGTTTCACAAGTTCTACAAAAACTTCTCATCTGGATTAAAGGATGTAGTCTGGAATACTGATGCAGCCGCTGAAGAACAAAAGCAATAA

Protein Analysis

447

Amino Acids

50.5

Weight (kDa)

8.48

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 19 - 274 2.2e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 20 - 270 1.2e-37 Protein tyrosine and serine/threonine kinase
NAF PF03822 314 - 374 1.2e-21 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 737, 1204
AccI GTMKAC 1 cut(s) 414
AccII CGCG 3 cut(s) 43, 326, 1039
AciI CCGC 5 cut(s) 135, 839, 1039, 1092, 1323
AclWI GGATC 1 cut(s) 439
AcyI GRCGYC 2 cut(s) 26, 1205
AfaI GTAC 1 cut(s) 833
AfiI CCNNNNNNNGG 1 cut(s) 160
AflII CTTAAG 1 cut(s) 341
AgeI ACCGGT 1 cut(s) 1238
AgsI TTSAA 5 cut(s) 242, 469, 823, 995, 1199
Alw26I GTCTC 2 cut(s) 478, 1143
AlwI GGATC 1 cut(s) 439
AlwNI CAGNNNCTG 1 cut(s) 1325
Ama87I CYCGRG 1 cut(s) 1253
ApeKI GCWGC 6 cut(s) 373, 596, 599, 714, 890, 1319
AsiGI ACCGGT 1 cut(s) 1238
Asp700I GAANNNNTTC 1 cut(s) 956
AspLEI GCGC 4 cut(s) 328, 494, 1018, 1207
AsuHPI GGTGA 4 cut(s) 109, 112, 317, 1256
AsuII TTCGAA 1 cut(s) 960
AvaI CYCGRG 1 cut(s) 1253
AxyI CCTNAGG 1 cut(s) 564
BanI GGYRCC 2 cut(s) 737, 1204
BbsI GAAGAC 1 cut(s) 157
BbvI GCAGC 6 cut(s) 385, 608, 611, 701, 877, 1331
BccI CCATC 4 cut(s) 55, 512, 850, 1216
BciVI GTATCC 1 cut(s) 955
BcoDI GTCTC 2 cut(s) 478, 1143
BfaI CTAG 1 cut(s) 972
BfmI CTRYAG 1 cut(s) 1185
BfoI RGCGCY 2 cut(s) 495, 1208
BfrI CTTAAG 1 cut(s) 341
BfuI GTATCC 1 cut(s) 955
BglII AGATCT 2 cut(s) 273, 424
BisI GCNGC 9 cut(s) 135, 374, 597, 600, 715, 839, 891, 1320, 1323
BlsI GCNGC 9 cut(s) 136, 375, 598, 601, 716, 840, 892, 1321, 1324
BmeT110I CYCGRG 1 cut(s) 1253
BmiI GGNNCC 2 cut(s) 739, 1206
BmsI GCATC 2 cut(s) 877, 1306
BpiI GAAGAC 1 cut(s) 157
BplI GAGNNNNNCTC 2 cut(s) 294, 326
Bpu10I CCTNAGC 2 cut(s) 93, 1229
Bpu14I TTCGAA 1 cut(s) 960
BpuEI CTTGAG 3 cut(s) 308, 413, 961
BsaBI GATNNNNATC 1 cut(s) 278
BsaHI GRCGYC 2 cut(s) 26, 1205
BsaJI CCNNGG 2 cut(s) 722, 906
BsaWI WCCGGW 2 cut(s) 122, 1238
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse118I RCCGGY 2 cut(s) 28, 1238
Bse21I CCTNAGG 1 cut(s) 564
Bse3DI GCAATG 1 cut(s) 1211
Bse8I GATNNNNATC 1 cut(s) 278
BseDI CCNNGG 2 cut(s) 722, 906
BseGI GGATG 3 cut(s) 226, 355, 1303
BseJI GATNNNNATC 1 cut(s) 278
BseLI CCNNNNNNNGG 1 cut(s) 160
BseMI GCAATG 1 cut(s) 1211
BseMII CTCAG 3 cut(s) 555, 696, 915
BseXI GCAGC 6 cut(s) 385, 608, 611, 701, 877, 1331
BsgI GTGCAG 1 cut(s) 615
Bsh1236I CGCG 3 cut(s) 43, 326, 1039
Bsh1285I CGRYCG 1 cut(s) 154
BshNI GGYRCC 2 cut(s) 737, 1204
BshTI ACCGGT 1 cut(s) 1238
BsiEI CGRYCG 1 cut(s) 154
BsiHKCI CYCGRG 1 cut(s) 1253
BsiSI CCGG 3 cut(s) 29, 123, 1239
BslFI GGGAC 1 cut(s) 78
BslI CCNNNNNNNGG 1 cut(s) 160
BsmAI GTCTC 2 cut(s) 478, 1143
BsmFI GGGAC 1 cut(s) 78
BsoBI CYCGRG 1 cut(s) 1253
Bsp119I TTCGAA 1 cut(s) 960
Bsp143I GATC 5 cut(s) 127, 273, 424, 444, 1055
Bsp19I CCATGG 1 cut(s) 722
BspACI CCGC 5 cut(s) 135, 839, 1039, 1092, 1323
BspCNI CTCAG 3 cut(s) 556, 697, 916
BspFNI CGCG 3 cut(s) 43, 326, 1039
BspHI TCATGA 1 cut(s) 675
BspLI GGNNCC 2 cut(s) 739, 1206
BspPI GGATC 1 cut(s) 439
BspT104I TTCGAA 1 cut(s) 960
BspT107I GGYRCC 2 cut(s) 737, 1204
BspTI CTTAAG 1 cut(s) 341
BsrDI GCAATG 1 cut(s) 1211
BsrFI RCCGGY 2 cut(s) 28, 1238
BssAI RCCGGY 2 cut(s) 28, 1238
BssECI CCNNGG 2 cut(s) 722, 906
BssMI GATC 5 cut(s) 127, 273, 424, 444, 1055
BssNI GRCGYC 2 cut(s) 26, 1205
BssT1I CCWWGG 2 cut(s) 722, 906
Bst4CI ACNGT 3 cut(s) 118, 404, 593
BstACI GRCGYC 2 cut(s) 26, 1205
BstAFI CTTAAG 1 cut(s) 341
BstBI TTCGAA 1 cut(s) 960
BstC8I GCNNGC 3 cut(s) 30, 262, 1014
BstDEI CTNAG 5 cut(s) 93, 564, 705, 924, 1229
BstDSI CCRYGG 1 cut(s) 722
BstF5I GGATG 3 cut(s) 226, 355, 1303
BstFNI CGCG 3 cut(s) 43, 326, 1039
BstH2I RGCGCY 2 cut(s) 495, 1208
BstHHI GCGC 4 cut(s) 328, 494, 1018, 1207
BstKTI GATC 5 cut(s) 130, 276, 427, 447, 1058
BstMAI GTCTC 2 cut(s) 478, 1143
BstMBI GATC 5 cut(s) 127, 273, 424, 444, 1055
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 2 cut(s) 29, 1213
BstNSI RCATGY 1 cut(s) 1220
BstSFI CTRYAG 1 cut(s) 1185
BstUI CGCG 3 cut(s) 43, 326, 1039
BstV1I GCAGC 6 cut(s) 385, 608, 611, 701, 877, 1331
BstV2I GAAGAC 1 cut(s) 157
BstX2I RGATCY 2 cut(s) 273, 424
BstYI RGATCY 2 cut(s) 273, 424
Bsu36I CCTNAGG 1 cut(s) 564
BsuI GTATCC 1 cut(s) 955
BtgI CCRYGG 1 cut(s) 722
BtsCI GGATG 3 cut(s) 226, 355, 1303
Cac8I GCNNGC 3 cut(s) 30, 262, 1014
CaiI CAGNNNCTG 1 cut(s) 1325
CciI TCATGA 1 cut(s) 675
CfoI GCGC 4 cut(s) 328, 494, 1018, 1207
Cfr10I RCCGGY 2 cut(s) 28, 1238
CseI GACGC 3 cut(s) 34, 49, 461
Csp6I GTAC 1 cut(s) 832
CspAI ACCGGT 1 cut(s) 1238
CviAII CATG 4 cut(s) 676, 723, 949, 1217
CviQI GTAC 1 cut(s) 832
DdeI CTNAG 5 cut(s) 93, 564, 705, 924, 1229
DinI GGCGCC 1 cut(s) 1206
DpnI GATC 5 cut(s) 129, 275, 426, 446, 1057
DpnII GATC 5 cut(s) 127, 273, 424, 444, 1055
Eco130I CCWWGG 2 cut(s) 722, 906
Eco81I CCTNAGG 1 cut(s) 564
Eco88I CYCGRG 1 cut(s) 1253
EcoT14I CCWWGG 2 cut(s) 722, 906
EgeI GGCGCC 1 cut(s) 1206
EheI GGCGCC 1 cut(s) 1206
ErhI CCWWGG 2 cut(s) 722, 906
FaeI CATG 4 cut(s) 679, 726, 952, 1220
FalI AAGNNNNNCTT 4 cut(s) 324, 356, 1005, 1037
FaqI GGGAC 1 cut(s) 78
FatI CATG 4 cut(s) 675, 722, 948, 1216
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 9 cut(s) 135, 374, 597, 600, 715, 839, 891, 1320, 1323
FokI GGATG 3 cut(s) 213, 362, 1310
Fsp4HI GCNGC 9 cut(s) 135, 374, 597, 600, 715, 839, 891, 1320, 1323
FspBI CTAG 1 cut(s) 972
GlaI GCGC 4 cut(s) 327, 493, 1017, 1206
GluI GCNGC 9 cut(s) 135, 374, 597, 600, 715, 839, 891, 1320, 1323
HaeII RGCGCY 2 cut(s) 495, 1208
HapII CCGG 3 cut(s) 29, 123, 1239
HgaI GACGC 3 cut(s) 34, 49, 461
HhaI GCGC 4 cut(s) 328, 494, 1018, 1207
Hin1I GRCGYC 2 cut(s) 26, 1205
Hin1II CATG 4 cut(s) 679, 726, 952, 1220
Hin6I GCGC 4 cut(s) 326, 492, 1016, 1205
HinP1I GCGC 4 cut(s) 326, 492, 1016, 1205
HindIII AAGCTT 1 cut(s) 85
HinfI GANTC 2 cut(s) 670, 747
HpaII CCGG 3 cut(s) 29, 123, 1239
HphI GGTGA 4 cut(s) 109, 112, 317, 1256
Hpy166II GTNNAC 3 cut(s) 308, 415, 1044
Hpy188I TCNGA 5 cut(s) 77, 360, 444, 478, 577
Hpy8I GTNNAC 3 cut(s) 308, 415, 1044
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 5 cut(s) 9, 13, 74, 505, 925
HpyCH4III ACNGT 3 cut(s) 118, 404, 593
HpyCH4IV ACGT 2 cut(s) 555, 691
HpyCH4V TGCA 5 cut(s) 596, 699, 797, 1216, 1319
HpyF10VI GCNNNNNNNGC 2 cut(s) 29, 1213
HpyF3I CTNAG 5 cut(s) 93, 564, 705, 924, 1229
HpySE526I ACGT 2 cut(s) 555, 691
Hsp92I GRCGYC 2 cut(s) 26, 1205
Hsp92II CATG 4 cut(s) 679, 726, 952, 1220
HspAI GCGC 4 cut(s) 326, 492, 1016, 1205
KasI GGCGCC 1 cut(s) 1204
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Kzo9I GATC 5 cut(s) 127, 273, 424, 444, 1055
Lsp1109I GCAGC 6 cut(s) 385, 608, 611, 701, 877, 1331
LweI GCATC 2 cut(s) 877, 1306
MaeI CTAG 1 cut(s) 972
MaeII ACGT 2 cut(s) 555, 691
MaeIII GTNAC 5 cut(s) 118, 170, 647, 899, 919
MalI GATC 5 cut(s) 129, 275, 426, 446, 1057
MboI GATC 5 cut(s) 127, 273, 424, 444, 1055
MboII GAAGA 8 cut(s) 157, 283, 527, 821, 940, 1039, 1097, 1340
MflI RGATCY 2 cut(s) 273, 424
MluCI AATT 1 cut(s) 52
Mly113I GGCGCC 1 cut(s) 1205
MlyI GAGTC 1 cut(s) 756
MmeI TCCRAC 1 cut(s) 555
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 956
MseI TTAA 6 cut(s) 192, 222, 342, 488, 1110, 1292
MslI CAYNNNNRTG 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 1325
MspCI CTTAAG 1 cut(s) 341
MspI CCGG 3 cut(s) 29, 123, 1239
MvnI CGCG 3 cut(s) 43, 326, 1039
MwoI GCNNNNNNNGC 2 cut(s) 29, 1213
NaeI GCCGGC 1 cut(s) 30
NarI GGCGCC 1 cut(s) 1205
NcoI CCATGG 1 cut(s) 722
NdeII GATC 5 cut(s) 127, 273, 424, 444, 1055
NgoMIV GCCGGC 1 cut(s) 28
NlaIII CATG 4 cut(s) 679, 726, 952, 1220
NlaIV GGNNCC 2 cut(s) 739, 1206
NmuCI GTSAC 2 cut(s) 118, 170
NspI RCATGY 1 cut(s) 1220
NspV TTCGAA 1 cut(s) 960
PaeR7I CTCGAG 1 cut(s) 1253
PagI TCATGA 1 cut(s) 675
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 1 cut(s) 670
PinAI ACCGGT 1 cut(s) 1238
PkrI GCNGC 9 cut(s) 136, 375, 598, 601, 716, 840, 892, 1321, 1324
PleI GAGTC 1 cut(s) 755
PluTI GGCGCC 1 cut(s) 1208
PpsI GAGTC 1 cut(s) 755
PspN4I GGNNCC 2 cut(s) 739, 1206
PspXI VCTCGAGB 1 cut(s) 1253
PstNI CAGNNNCTG 1 cut(s) 1325
PsuI RGATCY 2 cut(s) 273, 424
RsaI GTAC 1 cut(s) 833
RsaNI GTAC 1 cut(s) 832
RseI CAYNNNNRTG 1 cut(s) 231
SaqAI TTAA 6 cut(s) 192, 222, 342, 488, 1110, 1292
SatI GCNGC 9 cut(s) 135, 374, 597, 600, 715, 839, 891, 1320, 1323
Sau3AI GATC 5 cut(s) 127, 273, 424, 444, 1055
SchI GAGTC 1 cut(s) 756
SfaNI GCATC 2 cut(s) 877, 1306
SfcI CTRYAG 1 cut(s) 1185
SfoI GGCGCC 1 cut(s) 1206
Sfr274I CTCGAG 1 cut(s) 1253
SfuI TTCGAA 1 cut(s) 960
SgrAI CRCCGGYG 1 cut(s) 28
SlaI CTCGAG 1 cut(s) 1253
SmiMI CAYNNNNRTG 1 cut(s) 231
SmlI CTYRAG 5 cut(s) 287, 341, 428, 976, 1253
SmoI CTYRAG 5 cut(s) 287, 341, 428, 976, 1253
Sse9I AATT 1 cut(s) 52
SsiI CCGC 5 cut(s) 135, 839, 1039, 1092, 1323
SspDI GGCGCC 1 cut(s) 1204
SspMI CTAG 1 cut(s) 972
StyI CCWWGG 2 cut(s) 722, 906
TaaI ACNGT 3 cut(s) 118, 404, 593
TaiI ACGT 2 cut(s) 558, 694
TaqI TCGA 9 cut(s) 150, 183, 406, 765, 807, 960, 1005, 1076, 1254
TaqII GACCGA 1 cut(s) 168
TasI AATT 1 cut(s) 52
TauI GCSGC 3 cut(s) 137, 841, 1325
TfiI GAWTC 1 cut(s) 670
Tru1I TTAA 6 cut(s) 192, 222, 342, 488, 1110, 1292
Tru9I TTAA 6 cut(s) 192, 222, 342, 488, 1110, 1292
TseFI GTSAC 2 cut(s) 118, 170
TseI GCWGC 6 cut(s) 373, 596, 599, 714, 890, 1319
Tsp45I GTSAC 2 cut(s) 118, 170
TspDTI ATGAA 6 cut(s) 227, 366, 518, 828, 965, 1157
TspGWI ACGGA 3 cut(s) 158, 1106, 1168
Vha464I CTTAAG 1 cut(s) 341
XceI RCATGY 1 cut(s) 1220
XhoI CTCGAG 1 cut(s) 1253
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 1 cut(s) 972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.