RchiOBHm_Chr1g0360871

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
52747472 .. 52751660
4189 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58581

Sequence Viewer

Length: 1335 bp
ATGAGTACCGCAAAGTCGCCGAGGATGAGGACCCGGGTCGGGAAGTACGAGCTGGGCAAGACTCTCGGGGAGGGCACCTTTGCCAAGGTCAAGTTCGCCAAGAACACCGAAACCGGGCAGTGCGTCGCCATCAAAATCCTTGATCGTGAGCAAGTACTCAAGCACAAGATGGTTGAACATATAAAAAGAGAGATATCGACAATGAAGCTGATCAAGCACCCGAATGTCACGCAAATGTTTGAGGTTATGGCAAGCAAAACTAAGATCTACATTGTTCTCGAGTTTGTTGATGGGGGTGAGCTCTTTGACGAAATAGCCAAAAATGGGAGACTGAAAGAGGACGATGCCAGGAGATACTTCCAGCAGCTCATTAATGCCGTGGATTACTGTCATAGTAGAGGCGTGTACCATAGGGACTTAAAGCCAGAAAATCTTCTCTTAGATTCATACGGTGTCCTTAAAATATCAGATTTTGGATTGAGTACATTTGAACAAAAAGTGCGGGAAGATGGGCTGCTTCATACTGCCTGTGGGACTCCAAATTATGTTGCTCCTGAGGTTCTCAATAATAAAGGATACGAGGGTACATCATCTGATGTTTGGTCTTGCGGGGTGATCCTCTTTGTACTTATGGGTGGTTACCTGCCTTTTGATGAACCAAATCTCATAGCTCTGTACCGAAAAATATGCAAAGCTGAATTTTCATGTCCATCATGGTTTTCATCTGGTGCAAAGAAACTGATACACCGTATACTTGATCCAAACCCTGCAACGAGGATGACAATTCCCGAGATATTAGAAAATGAATGGTTTAAGAAAGATTACAAGCCAGCACAGTTTCAAGAAGAAGACAATGTAAATCTTGATGATGTGGATGCTGTTTTCAACAAATCAAAGGAAAATCTTGTAACAGAAAGGAAGGAGAAACCTACATCAATGAATGCTTTTGAGCTTATTTCGAGGTCACAGAGTTTCAATCTAGAAAATTTATTTGAGAAGCAGATGGGTCATGTGAAACGAGAAACCCGTTTCACTTCTCAACGCCCTGCAAATGAAATCATGAGTAAGATTGAGGCGACTGCAAAGCCTTTGGGCTTTAATGTTCACAAGAAAAACTACAAGATGAAGTTGCAAGGTGATAAGCATGGAAGGAAGGGTCACCTCTCTGTAGCCACTGAGGTGTTCGAGGTGGCTCCCTCCGTGCACATGGTAGAACTCAGGAAAACTGGTGGTGACACACTAGAGTTTCACAAGTTCTATAAAAATTTCTCATCGGGGTTGAAAGACATAGTGTGGAAATCTGAAGAAACTACTACTGAAGAATCAAGGTCATAA

Protein Analysis

444

Amino Acids

50.83

Weight (kDa)

8.82

Isoelectric Point (pI)

40.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 271 4.8e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 267 1.6e-38 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 113 - 220 8e-07 Kinase-like
NAF PF03822 310 - 370 1.9e-23 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 651
AccB1I GGYRCC 1 cut(s) 74
AccI GTMKAC 1 cut(s) 751
AciI CCGC 3 cut(s) 9, 502, 609
AclWI GGATC 2 cut(s) 610, 752
AcsI RAATTY 3 cut(s) 698, 985, 1264
AcuI CTGAAG 1 cut(s) 1323
AfaI GTAC 8 cut(s) 7, 47, 156, 407, 484, 586, 627, 677
AfiI CCNNNNNNNGG 3 cut(s) 39, 114, 324
AgsI TTSAA 6 cut(s) 176, 491, 842, 886, 976, 1282
AjnI CCWGG 1 cut(s) 347
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AleI CACNNNNGTG 1 cut(s) 1178
AluBI AGCT 7 cut(s) 52, 208, 301, 367, 671, 695, 952
AluI AGCT 7 cut(s) 52, 208, 301, 367, 671, 695, 952
Alw21I GWGCWC 2 cut(s) 303, 1206
Alw26I GTCTC 1 cut(s) 322
Alw44I GTGCAC 1 cut(s) 1202
AlwI GGATC 2 cut(s) 610, 752
Ama87I CYCGRG 4 cut(s) 33, 65, 278, 788
ApaLI GTGCAC 1 cut(s) 1202
ApeKI GCWGC 2 cut(s) 364, 514
ApoI RAATTY 3 cut(s) 698, 985, 1264
AseI ATTAAT 1 cut(s) 372
Asp700I GAANNNNTTC 1 cut(s) 432
AspS9I GGNCC 1 cut(s) 30
AsuC2I CCSGG 3 cut(s) 34, 35, 115
AsuHPI GGTGA 5 cut(s) 308, 625, 1148, 1151, 1244
AvaI CYCGRG 4 cut(s) 33, 65, 278, 788
AvaII GGWCC 1 cut(s) 30
AxyI CCTNAGG 1 cut(s) 555
BaeGI GKGCMC 2 cut(s) 77, 1206
BaeI ACNNNNGTAYC 2 cut(s) 568, 601
BanI GGYRCC 1 cut(s) 74
BanII GRGCYC 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 2 cut(s) 303, 1206
BbvI GCAGC 2 cut(s) 376, 501
BccI CCATC 6 cut(s) 137, 163, 284, 503, 718, 997
BceAI ACGGC 1 cut(s) 362
BcgI CGANNNNNNTGC 4 cut(s) 46, 80, 669, 703
BciT130I CCWGG 1 cut(s) 349
BciVI GTATCC 1 cut(s) 569
BclI TGATCA 1 cut(s) 210
BcnI CCSGG 3 cut(s) 34, 35, 115
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 2 cut(s) 980, 1241
BfmI CTRYAG 1 cut(s) 1167
BfuAI ACCTGC 1 cut(s) 651
BfuI GTATCC 1 cut(s) 569
BglII AGATCT 1 cut(s) 264
BisI GCNGC 2 cut(s) 365, 515
BlsI GCNGC 2 cut(s) 366, 516
BmcAI AGTACT 1 cut(s) 156
Bme1390I CCNGG 4 cut(s) 34, 35, 115, 349
Bme18I GGWCC 1 cut(s) 30
BmeT110I CYCGRG 4 cut(s) 33, 65, 278, 788
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 3 cut(s) 32, 76, 1194
BmrFI CCNGG 4 cut(s) 34, 35, 115, 349
BmsI GCATC 2 cut(s) 334, 865
BoxI GACNNNNGTC 1 cut(s) 35
BpiI GAAGAC 1 cut(s) 855
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 3 cut(s) 34, 35, 115
BsaJI CCNNGG 4 cut(s) 20, 33, 84, 378
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 114, 324
Bse1I ACTGG 1 cut(s) 1231
Bse21I CCTNAGG 1 cut(s) 555
BseBI CCWGG 1 cut(s) 349
BseDI CCNNGG 4 cut(s) 20, 33, 84, 378
BseGI GGATG 3 cut(s) 30, 783, 880
BseLI CCNNNNNNNGG 3 cut(s) 39, 114, 324
BseMII CTCAG 3 cut(s) 546, 1167, 1231
BseNI ACTGG 1 cut(s) 1231
BseSI GKGCMC 2 cut(s) 77, 1206
BseXI GCAGC 2 cut(s) 376, 501
BseYI CCCAGC 1 cut(s) 52
BshNI GGYRCC 1 cut(s) 74
BsiHKAI GWGCWC 2 cut(s) 303, 1206
BsiHKCI CYCGRG 4 cut(s) 33, 65, 278, 788
BsiSI CCGG 2 cut(s) 34, 114
BslFI GGGAC 2 cut(s) 428, 547
BslI CCNNNNNNNGG 3 cut(s) 39, 114, 324
BsmAI GTCTC 1 cut(s) 322
BsmFI GGGAC 2 cut(s) 428, 547
BsmI GAATGC 1 cut(s) 946
BsoBI CYCGRG 4 cut(s) 33, 65, 278, 788
Bsp1286I GDGCHC 3 cut(s) 77, 303, 1206
Bsp143I GATC 5 cut(s) 142, 210, 264, 615, 757
BspACI CCGC 3 cut(s) 9, 502, 609
BspCNI CTCAG 3 cut(s) 547, 1168, 1230
BspHI TCATGA 1 cut(s) 1059
BspLI GGNNCC 3 cut(s) 32, 76, 1194
BspMI ACCTGC 1 cut(s) 651
BspPI GGATC 2 cut(s) 610, 752
BspT107I GGYRCC 1 cut(s) 74
BsrI ACTGG 1 cut(s) 1231
BssECI CCNNGG 4 cut(s) 20, 33, 84, 378
BssMI GATC 5 cut(s) 142, 210, 264, 615, 757
BssNAI GTATAC 1 cut(s) 752
BssT1I CCWWGG 1 cut(s) 84
Bst1107I GTATAC 1 cut(s) 752
Bst2UI CCWGG 1 cut(s) 349
Bst4CI ACNGT 4 cut(s) 389, 452, 749, 837
BstC8I GCNNGC 2 cut(s) 253, 831
BstDEI CTNAG 5 cut(s) 261, 439, 555, 1176, 1217
BstDSI CCRYGG 1 cut(s) 378
BstEII GGTNACC 2 cut(s) 638, 1157
BstF5I GGATG 3 cut(s) 30, 783, 880
BstKTI GATC 5 cut(s) 145, 213, 267, 618, 760
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 5 cut(s) 142, 210, 264, 615, 757
BstMWI GCNNNNNNNGC 1 cut(s) 214
BstNI CCWGG 1 cut(s) 349
BstPAI GACNNNNGTC 1 cut(s) 35
BstPI GGTNACC 2 cut(s) 638, 1157
BstSCI CCNGG 4 cut(s) 32, 33, 113, 347
BstSFI CTRYAG 1 cut(s) 1167
BstSLI GKGCMC 2 cut(s) 77, 1206
BstV1I GCAGC 2 cut(s) 376, 501
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 264
BstYI RGATCY 1 cut(s) 264
BstZ17I GTATAC 1 cut(s) 752
Bsu36I CCTNAGG 1 cut(s) 555
BsuI GTATCC 1 cut(s) 569
BtgI CCRYGG 1 cut(s) 378
BtsCI GGATG 3 cut(s) 30, 783, 880
BtsI GCAGTG 1 cut(s) 125
BtsIMutI CAGTG 2 cut(s) 125, 1173
BveI ACCTGC 1 cut(s) 651
Cac8I GCNNGC 2 cut(s) 253, 831
CciI TCATGA 1 cut(s) 1059
Cfr13I GGNCC 1 cut(s) 30
Cfr9I CCCGGG 1 cut(s) 33
CseI GACGC 1 cut(s) 112
Csp6I GTAC 8 cut(s) 6, 46, 155, 406, 483, 585, 626, 676
CviAII CATG 6 cut(s) 705, 714, 1010, 1060, 1145, 1207
CviQI GTAC 8 cut(s) 6, 46, 155, 406, 483, 585, 626, 676
DdeI CTNAG 5 cut(s) 261, 439, 555, 1176, 1217
DpnI GATC 5 cut(s) 144, 212, 266, 617, 759
DpnII GATC 5 cut(s) 142, 210, 264, 615, 757
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 1 cut(s) 84
Eco24I GRGCYC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 195
Eco47I GGWCC 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 301
Eco57I CTGAAG 1 cut(s) 1323
Eco81I CCTNAGG 1 cut(s) 555
Eco88I CYCGRG 4 cut(s) 33, 65, 278, 788
Eco91I GGTNACC 2 cut(s) 638, 1157
EcoICRI GAGCTC 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 30
EcoO65I GGTNACC 2 cut(s) 638, 1157
EcoRII CCWGG 1 cut(s) 347
EcoRV GATATC 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 84
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 1 cut(s) 84
FaeI CATG 6 cut(s) 708, 717, 1013, 1063, 1148, 1210
FaqI GGGAC 2 cut(s) 428, 547
FatI CATG 6 cut(s) 704, 713, 1009, 1059, 1144, 1206
FauI CCCGC 2 cut(s) 495, 602
FbaI TGATCA 1 cut(s) 210
FblI GTMKAC 1 cut(s) 751
Fnu4HI GCNGC 2 cut(s) 365, 515
FokI GGATG 3 cut(s) 37, 790, 887
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 2 cut(s) 365, 515
FspBI CTAG 2 cut(s) 980, 1241
GluI GCNGC 2 cut(s) 365, 515
GsaI CCCAGC 1 cut(s) 56
HapII CCGG 2 cut(s) 34, 114
HgaI GACGC 1 cut(s) 112
Hin1II CATG 6 cut(s) 708, 717, 1013, 1063, 1148, 1210
HinfI GANTC 4 cut(s) 61, 443, 535, 1322
HpaII CCGG 2 cut(s) 34, 114
HphI GGTGA 5 cut(s) 308, 625, 1148, 1151, 1244
Hpy166II GTNNAC 4 cut(s) 406, 752, 1105, 1204
Hpy188I TCNGA 3 cut(s) 469, 595, 1303
Hpy8I GTNNAC 4 cut(s) 406, 752, 1105, 1204
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 3 cut(s) 913, 1143, 1147
HpyCH4III ACNGT 4 cut(s) 389, 452, 749, 837
HpyCH4V TGCA 7 cut(s) 690, 731, 770, 1049, 1082, 1132, 1204
HpyF10VI GCNNNNNNNGC 1 cut(s) 214
HpyF3I CTNAG 5 cut(s) 261, 439, 555, 1176, 1217
Hsp92II CATG 6 cut(s) 708, 717, 1013, 1063, 1148, 1210
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 5 cut(s) 142, 210, 264, 615, 757
LmnI GCTCC 2 cut(s) 556, 1198
Lsp1109I GCAGC 2 cut(s) 376, 501
LweI GCATC 2 cut(s) 334, 865
MaeI CTAG 2 cut(s) 980, 1241
MaeIII GTNAC 6 cut(s) 226, 638, 907, 963, 1157, 1232
MalI GATC 5 cut(s) 144, 212, 266, 617, 759
MboI GATC 5 cut(s) 142, 210, 264, 615, 757
MboII GAAGA 6 cut(s) 425, 518, 857, 860, 1316, 1331
MflI RGATCY 1 cut(s) 264
MhlI GDGCHC 3 cut(s) 77, 303, 1206
MluCI AATT 5 cut(s) 541, 698, 783, 985, 1264
MlyI GAGTC 2 cut(s) 55, 529
MroXI GAANNNNTTC 1 cut(s) 432
MseI TTAA 5 cut(s) 372, 419, 459, 813, 1098
MslI CAYNNNNRTG 3 cut(s) 222, 233, 1178
MspI CCGG 2 cut(s) 34, 114
MspR9I CCNGG 4 cut(s) 34, 35, 115, 349
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 1 cut(s) 349
MwoI GCNNNNNNNGC 1 cut(s) 214
NciI CCSGG 3 cut(s) 34, 35, 115
NdeII GATC 5 cut(s) 142, 210, 264, 615, 757
NlaIII CATG 6 cut(s) 708, 717, 1013, 1063, 1148, 1210
NlaIV GGNNCC 3 cut(s) 32, 76, 1194
NmeAIII GCCGAG 1 cut(s) 45
NmuCI GTSAC 4 cut(s) 226, 963, 1157, 1232
OliI CACNNNNGTG 1 cut(s) 1178
PaeR7I CTCGAG 1 cut(s) 278
PagI TCATGA 1 cut(s) 1059
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 1024
PctI GAATGC 1 cut(s) 946
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 2 cut(s) 443, 1322
PkrI GCNGC 2 cut(s) 366, 516
PleI GAGTC 2 cut(s) 55, 529
PpsI GAGTC 2 cut(s) 55, 529
PpuMI RGGWCCY 1 cut(s) 30
PshAI GACNNNNGTC 1 cut(s) 35
PshBI ATTAAT 1 cut(s) 372
Psp124BI GAGCTC 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 347
PspEI GGTNACC 2 cut(s) 638, 1157
PspFI CCCAGC 1 cut(s) 52
PspGI CCWGG 1 cut(s) 347
PspN4I GGNNCC 3 cut(s) 32, 76, 1194
PspPI GGNCC 1 cut(s) 30
PspPPI RGGWCCY 1 cut(s) 30
PsuI RGATCY 1 cut(s) 264
RsaI GTAC 8 cut(s) 7, 47, 156, 407, 484, 586, 627, 677
RsaNI GTAC 8 cut(s) 6, 46, 155, 406, 483, 585, 626, 676
RseI CAYNNNNRTG 3 cut(s) 222, 233, 1178
SacI GAGCTC 1 cut(s) 303
SaqAI TTAA 5 cut(s) 372, 419, 459, 813, 1098
SatI GCNGC 2 cut(s) 365, 515
Sau3AI GATC 5 cut(s) 142, 210, 264, 615, 757
Sau96I GGNCC 1 cut(s) 30
ScaI AGTACT 1 cut(s) 156
SchI GAGTC 2 cut(s) 55, 529
ScrFI CCNGG 4 cut(s) 34, 35, 115, 349
SduI GDGCHC 3 cut(s) 77, 303, 1206
SfaNI GCATC 2 cut(s) 334, 865
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 1 cut(s) 278
SinI GGWCC 1 cut(s) 30
SlaI CTCGAG 1 cut(s) 278
SmaI CCCGGG 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 222, 233, 1178
SmlI CTYRAG 2 cut(s) 158, 278
SmoI CTYRAG 2 cut(s) 158, 278
Sse9I AATT 5 cut(s) 541, 698, 783, 985, 1264
SsiI CCGC 3 cut(s) 9, 502, 609
SspMI CTAG 2 cut(s) 980, 1241
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 4 cut(s) 32, 33, 113, 347
StyI CCWWGG 1 cut(s) 84
TaaI ACNGT 4 cut(s) 389, 452, 749, 837
TaqI TCGA 4 cut(s) 197, 279, 959, 1185
TasI AATT 5 cut(s) 541, 698, 783, 985, 1264
TatI WGTACW 3 cut(s) 154, 482, 625
TfiI GAWTC 2 cut(s) 443, 1322
Tru1I TTAA 5 cut(s) 372, 419, 459, 813, 1098
Tru9I TTAA 5 cut(s) 372, 419, 459, 813, 1098
TscAI CASTG 2 cut(s) 125, 1180
TseFI GTSAC 4 cut(s) 226, 963, 1157, 1232
TseI GCWGC 2 cut(s) 364, 514
Tsp45I GTSAC 4 cut(s) 226, 963, 1157, 1232
TspGWI ACGGA 1 cut(s) 1189
TspMI CCCGGG 1 cut(s) 33
TspRI CASTG 2 cut(s) 125, 1180
VneI GTGCAC 1 cut(s) 1202
VpaK11BI GGWCC 1 cut(s) 30
VspI ATTAAT 1 cut(s) 372
XapI RAATTY 3 cut(s) 698, 985, 1264
XbaI TCTAGA 1 cut(s) 979
XhoI CTCGAG 1 cut(s) 278
XmaI CCCGGG 1 cut(s) 33
XmiI GTMKAC 1 cut(s) 751
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 2 cut(s) 980, 1241
ZrmI AGTACT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.