Rw1G026030

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
52989387 .. 52993306
3920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G026030.1

Sequence Viewer

Length: 1200 bp
ATGAGTACCGCAAAGTCGCCGAGGATGAGGACCCGGGTCGGGAAGTACGAGCTGGGCAAGACTCTCGGGGAGGGCACCTTTGCCAAGGTCAAGTTCGCCAAGAACACCGAAACCGGGCAGTGCGTCGCCATCAAAATCCTTGATCGTGAGCAAGTACTCAAGCACAAGATGGTTGAACATATAAAAAGAGAGATATCGACAATGAAGCTGATCAAGCACCCGAATGTCACGCAAATGTTTGAGGTTATGGCTAGCAAAACTAAGATCTACATTGTTCTCGAGTTTGTTGATGGGGGTGAGCTCTTTGACGAAATAGCCAAAAATGGGAGACTGAAAGAGGACGATGCCAGGAGATACTTCCAGCAGCTCATTAATGCTGTGGATTACTGTCATAGTAGAGGCGTGTACCATAGGGATTTAAAGCCAGAAAATCTTCTCTTAGATTCATACGGTGTCCTTAAAATATCAGATTTTGGATTGAGTACATTTGAACAAAAAGTGCGGGAAGATGGACTGCTTCATACTGCCTGTGGGACTCCAAATTATGTTGCTCCTGAGGTTCTCAATAATAAAGGATACGAGGGTACATCATCTGATGTTTGGTCTTGCGGGGTGATCCTCTTTGTACTTATGGGTGGTTACCTGCCGTTTGATGAACCAAATCTCATAGCTCTGTACCGAAAAATATGCAAAGCTGAATTTTCATGTCCATCATGGTTTTCATCTGGTGCAAAGAAACTGATACACCGTATACTTGATCCAAACCCAGCTACGAGGATGACAATTCCCGAGATATTAGAAAATGAATGGTTTAAGAAAGATTACAAGCCAGCACAGTTTCAAGAAGAAGACAATGTAAATCTTGATGATGTGGATGCTGTTTTCAACAAATCAAAGGAAAATCTTGTAACAGAAAGGAAGGAGAAACCTACATCAATGAATGCTTTTGAGCTTATTTCGAGGTCACAGAGTTTCAATCTAGAAAATTTATTTGAGAAGCAGATGGGTCATGTGAAACGAGAAACCCGTTTCACTTCTCAACGCCCTGCAAATGAAATCATGAGTAAGATTGAGGCGACTGCAAAGCCTTTGGGCTTTAATGTTCACAAGAAAAACTACAAGATGAAGTTGCAAGGTGATAAGCATGGAAGGAAGGGTCACCTCTCTGTAGCCACTGAGGTACAGACTTGGCATATGTGA

Protein Analysis

399

Amino Acids

45.76

Weight (kDa)

9.01

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 271 3.5e-75 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 267 1.2e-38 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 112 - 220 5.9e-07 Kinase-like
NAF PF03822 310 - 370 1.6e-23 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 651
AccB1I GGYRCC 1 cut(s) 74
AccI GTMKAC 1 cut(s) 751
AciI CCGC 3 cut(s) 9, 502, 609
AclWI GGATC 2 cut(s) 610, 752
AcsI RAATTY 2 cut(s) 698, 985
AfaI GTAC 9 cut(s) 7, 47, 156, 407, 484, 586, 627, 677, 1182
AfiI CCNNNNNNNGG 3 cut(s) 39, 114, 324
AgsI TTSAA 5 cut(s) 176, 491, 842, 886, 976
AjnI CCWGG 1 cut(s) 347
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AluBI AGCT 8 cut(s) 52, 208, 301, 367, 671, 695, 770, 952
AluI AGCT 8 cut(s) 52, 208, 301, 367, 671, 695, 770, 952
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 2 cut(s) 610, 752
Ama87I CYCGRG 4 cut(s) 33, 65, 278, 788
ApeKI GCWGC 1 cut(s) 364
ApoI RAATTY 2 cut(s) 698, 985
AseI ATTAAT 1 cut(s) 372
Asp700I GAANNNNTTC 1 cut(s) 432
AspS9I GGNCC 1 cut(s) 30
AsuC2I CCSGG 3 cut(s) 34, 35, 115
AsuHPI GGTGA 4 cut(s) 308, 625, 1148, 1151
AsuNHI GCTAGC 1 cut(s) 251
AvaI CYCGRG 4 cut(s) 33, 65, 278, 788
AvaII GGWCC 1 cut(s) 30
AxyI CCTNAGG 1 cut(s) 555
BaeGI GKGCMC 1 cut(s) 77
BaeI ACNNNNGTAYC 2 cut(s) 568, 601
BanI GGYRCC 1 cut(s) 74
BanII GRGCYC 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 1 cut(s) 376
BccI CCATC 6 cut(s) 137, 163, 284, 503, 718, 997
BceAI ACGGC 1 cut(s) 631
BcgI CGANNNNNNTGC 4 cut(s) 46, 80, 669, 703
BciT130I CCWGG 1 cut(s) 349
BciVI GTATCC 1 cut(s) 569
BclI TGATCA 1 cut(s) 210
BcnI CCSGG 3 cut(s) 34, 35, 115
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 2 cut(s) 252, 980
BfmI CTRYAG 1 cut(s) 1167
BfuAI ACCTGC 1 cut(s) 651
BfuI GTATCC 1 cut(s) 569
BglII AGATCT 1 cut(s) 264
BisI GCNGC 1 cut(s) 365
BlsI GCNGC 1 cut(s) 366
BmcAI AGTACT 1 cut(s) 156
Bme1390I CCNGG 4 cut(s) 34, 35, 115, 349
Bme18I GGWCC 1 cut(s) 30
BmeT110I CYCGRG 4 cut(s) 33, 65, 278, 788
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 2 cut(s) 32, 76
BmrFI CCNGG 4 cut(s) 34, 35, 115, 349
BmsI GCATC 2 cut(s) 334, 865
BmtI GCTAGC 1 cut(s) 255
BoxI GACNNNNGTC 1 cut(s) 35
BpiI GAAGAC 1 cut(s) 855
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 3 cut(s) 34, 35, 115
BsaJI CCNNGG 3 cut(s) 20, 33, 84
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 114, 324
Bse21I CCTNAGG 1 cut(s) 555
BseBI CCWGG 1 cut(s) 349
BseDI CCNNGG 3 cut(s) 20, 33, 84
BseGI GGATG 3 cut(s) 30, 783, 880
BseLI CCNNNNNNNGG 3 cut(s) 39, 114, 324
BseMII CTCAG 2 cut(s) 546, 1167
BseSI GKGCMC 1 cut(s) 77
BseXI GCAGC 1 cut(s) 376
BseYI CCCAGC 2 cut(s) 52, 766
BshNI GGYRCC 1 cut(s) 74
BsiHKAI GWGCWC 1 cut(s) 303
BsiHKCI CYCGRG 4 cut(s) 33, 65, 278, 788
BsiSI CCGG 2 cut(s) 34, 114
BslFI GGGAC 1 cut(s) 547
BslI CCNNNNNNNGG 3 cut(s) 39, 114, 324
BsmAI GTCTC 1 cut(s) 322
BsmFI GGGAC 1 cut(s) 547
BsmI GAATGC 1 cut(s) 946
BsoBI CYCGRG 4 cut(s) 33, 65, 278, 788
Bsp1286I GDGCHC 2 cut(s) 77, 303
Bsp143I GATC 5 cut(s) 142, 210, 264, 615, 757
BspACI CCGC 3 cut(s) 9, 502, 609
BspCNI CTCAG 2 cut(s) 547, 1168
BspHI TCATGA 1 cut(s) 1059
BspLI GGNNCC 2 cut(s) 32, 76
BspMI ACCTGC 1 cut(s) 651
BspOI GCTAGC 1 cut(s) 255
BspPI GGATC 2 cut(s) 610, 752
BspT107I GGYRCC 1 cut(s) 74
BssECI CCNNGG 3 cut(s) 20, 33, 84
BssMI GATC 5 cut(s) 142, 210, 264, 615, 757
BssNAI GTATAC 1 cut(s) 752
BssT1I CCWWGG 1 cut(s) 84
Bst1107I GTATAC 1 cut(s) 752
Bst2UI CCWGG 1 cut(s) 349
Bst4CI ACNGT 4 cut(s) 389, 452, 749, 837
BstC8I GCNNGC 2 cut(s) 253, 831
BstDEI CTNAG 4 cut(s) 261, 439, 555, 1176
BstEII GGTNACC 2 cut(s) 638, 1157
BstF5I GGATG 3 cut(s) 30, 783, 880
BstKTI GATC 5 cut(s) 145, 213, 267, 618, 760
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 5 cut(s) 142, 210, 264, 615, 757
BstMWI GCNNNNNNNGC 1 cut(s) 214
BstNI CCWGG 1 cut(s) 349
BstPAI GACNNNNGTC 1 cut(s) 35
BstPI GGTNACC 2 cut(s) 638, 1157
BstSCI CCNGG 4 cut(s) 32, 33, 113, 347
BstSFI CTRYAG 1 cut(s) 1167
BstSLI GKGCMC 1 cut(s) 77
BstV1I GCAGC 1 cut(s) 376
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 264
BstYI RGATCY 1 cut(s) 264
BstZ17I GTATAC 1 cut(s) 752
Bsu36I CCTNAGG 1 cut(s) 555
BsuI GTATCC 1 cut(s) 569
BtsCI GGATG 3 cut(s) 30, 783, 880
BtsI GCAGTG 1 cut(s) 125
BtsIMutI CAGTG 2 cut(s) 125, 1173
BveI ACCTGC 1 cut(s) 651
Cac8I GCNNGC 2 cut(s) 253, 831
CciI TCATGA 1 cut(s) 1059
Cfr13I GGNCC 1 cut(s) 30
Cfr9I CCCGGG 1 cut(s) 33
CseI GACGC 1 cut(s) 112
Csp6I GTAC 9 cut(s) 6, 46, 155, 406, 483, 585, 626, 676, 1181
CviAII CATG 5 cut(s) 705, 714, 1010, 1060, 1145
CviQI GTAC 9 cut(s) 6, 46, 155, 406, 483, 585, 626, 676, 1181
DdeI CTNAG 4 cut(s) 261, 439, 555, 1176
DpnI GATC 5 cut(s) 144, 212, 266, 617, 759
DpnII GATC 5 cut(s) 142, 210, 264, 615, 757
DraI TTTAAA 1 cut(s) 420
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 1 cut(s) 84
Eco24I GRGCYC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 195
Eco47I GGWCC 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 301
Eco81I CCTNAGG 1 cut(s) 555
Eco88I CYCGRG 4 cut(s) 33, 65, 278, 788
Eco91I GGTNACC 2 cut(s) 638, 1157
EcoICRI GAGCTC 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 30
EcoO65I GGTNACC 2 cut(s) 638, 1157
EcoRII CCWGG 1 cut(s) 347
EcoRV GATATC 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 84
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 1 cut(s) 84
FaeI CATG 5 cut(s) 708, 717, 1013, 1063, 1148
FaqI GGGAC 1 cut(s) 547
FatI CATG 5 cut(s) 704, 713, 1009, 1059, 1144
FauI CCCGC 2 cut(s) 495, 602
FauNDI CATATG 1 cut(s) 1194
FbaI TGATCA 1 cut(s) 210
FblI GTMKAC 1 cut(s) 751
Fnu4HI GCNGC 1 cut(s) 365
FokI GGATG 3 cut(s) 37, 790, 887
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 1 cut(s) 365
FspBI CTAG 2 cut(s) 252, 980
GluI GCNGC 1 cut(s) 365
GsaI CCCAGC 2 cut(s) 56, 770
HapII CCGG 2 cut(s) 34, 114
HgaI GACGC 1 cut(s) 112
Hin1II CATG 5 cut(s) 708, 717, 1013, 1063, 1148
HinfI GANTC 3 cut(s) 61, 443, 535
HpaII CCGG 2 cut(s) 34, 114
HphI GGTGA 4 cut(s) 308, 625, 1148, 1151
Hpy166II GTNNAC 3 cut(s) 406, 752, 1105
Hpy188I TCNGA 2 cut(s) 469, 595
Hpy188III TCNNGA 9 cut(s) 40, 146, 278, 554, 788, 842, 863, 980, 1060
Hpy8I GTNNAC 3 cut(s) 406, 752, 1105
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 3 cut(s) 913, 1143, 1147
HpyCH4III ACNGT 4 cut(s) 389, 452, 749, 837
HpyCH4V TGCA 5 cut(s) 690, 731, 1049, 1082, 1132
HpyF10VI GCNNNNNNNGC 1 cut(s) 214
HpyF3I CTNAG 4 cut(s) 261, 439, 555, 1176
Hsp92II CATG 5 cut(s) 708, 717, 1013, 1063, 1148
Ksp22I TGATCA 1 cut(s) 210
Kzo9I GATC 5 cut(s) 142, 210, 264, 615, 757
LmnI GCTCC 1 cut(s) 556
Lsp1109I GCAGC 1 cut(s) 376
LweI GCATC 2 cut(s) 334, 865
MaeI CTAG 2 cut(s) 252, 980
MaeIII GTNAC 5 cut(s) 226, 638, 907, 963, 1157
MalI GATC 5 cut(s) 144, 212, 266, 617, 759
MboI GATC 5 cut(s) 142, 210, 264, 615, 757
MboII GAAGA 4 cut(s) 425, 518, 857, 860
MflI RGATCY 1 cut(s) 264
MhlI GDGCHC 2 cut(s) 77, 303
MluCI AATT 4 cut(s) 541, 698, 783, 985
MlyI GAGTC 2 cut(s) 55, 529
MroXI GAANNNNTTC 1 cut(s) 432
MseI TTAA 5 cut(s) 372, 419, 459, 813, 1098
MslI CAYNNNNRTG 2 cut(s) 222, 233
MspI CCGG 2 cut(s) 34, 114
MspR9I CCNGG 4 cut(s) 34, 35, 115, 349
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 1 cut(s) 349
MwoI GCNNNNNNNGC 1 cut(s) 214
NciI CCSGG 3 cut(s) 34, 35, 115
NdeI CATATG 1 cut(s) 1194
NdeII GATC 5 cut(s) 142, 210, 264, 615, 757
NheI GCTAGC 1 cut(s) 251
NlaIII CATG 5 cut(s) 708, 717, 1013, 1063, 1148
NlaIV GGNNCC 2 cut(s) 32, 76
NmeAIII GCCGAG 1 cut(s) 45
NmuCI GTSAC 3 cut(s) 226, 963, 1157
PaeR7I CTCGAG 1 cut(s) 278
PagI TCATGA 1 cut(s) 1059
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 1024
PctI GAATGC 1 cut(s) 946
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 1 cut(s) 443
PkrI GCNGC 1 cut(s) 366
PleI GAGTC 2 cut(s) 55, 529
PpsI GAGTC 2 cut(s) 55, 529
PpuMI RGGWCCY 1 cut(s) 30
PshAI GACNNNNGTC 1 cut(s) 35
PshBI ATTAAT 1 cut(s) 372
Psp124BI GAGCTC 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 347
PspEI GGTNACC 2 cut(s) 638, 1157
PspFI CCCAGC 2 cut(s) 52, 766
PspGI CCWGG 1 cut(s) 347
PspN4I GGNNCC 2 cut(s) 32, 76
PspPI GGNCC 1 cut(s) 30
PspPPI RGGWCCY 1 cut(s) 30
PsuI RGATCY 1 cut(s) 264
RsaI GTAC 9 cut(s) 7, 47, 156, 407, 484, 586, 627, 677, 1182
RsaNI GTAC 9 cut(s) 6, 46, 155, 406, 483, 585, 626, 676, 1181
RseI CAYNNNNRTG 2 cut(s) 222, 233
SacI GAGCTC 1 cut(s) 303
SaqAI TTAA 5 cut(s) 372, 419, 459, 813, 1098
SatI GCNGC 1 cut(s) 365
Sau3AI GATC 5 cut(s) 142, 210, 264, 615, 757
Sau96I GGNCC 1 cut(s) 30
ScaI AGTACT 1 cut(s) 156
SchI GAGTC 2 cut(s) 55, 529
ScrFI CCNGG 4 cut(s) 34, 35, 115, 349
SduI GDGCHC 2 cut(s) 77, 303
SfaNI GCATC 2 cut(s) 334, 865
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 1 cut(s) 278
SinI GGWCC 1 cut(s) 30
SlaI CTCGAG 1 cut(s) 278
SmaI CCCGGG 1 cut(s) 35
SmiMI CAYNNNNRTG 2 cut(s) 222, 233
SmlI CTYRAG 2 cut(s) 158, 278
SmoI CTYRAG 2 cut(s) 158, 278
Sse9I AATT 4 cut(s) 541, 698, 783, 985
SsiI CCGC 3 cut(s) 9, 502, 609
SspMI CTAG 2 cut(s) 252, 980
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 4 cut(s) 32, 33, 113, 347
StyI CCWWGG 1 cut(s) 84
TaaI ACNGT 4 cut(s) 389, 452, 749, 837
TaqI TCGA 3 cut(s) 197, 279, 959
TasI AATT 4 cut(s) 541, 698, 783, 985
TatI WGTACW 3 cut(s) 154, 482, 625
TfiI GAWTC 1 cut(s) 443
Tru1I TTAA 5 cut(s) 372, 419, 459, 813, 1098
Tru9I TTAA 5 cut(s) 372, 419, 459, 813, 1098
TscAI CASTG 2 cut(s) 125, 1180
TseFI GTSAC 3 cut(s) 226, 963, 1157
TseI GCWGC 1 cut(s) 364
Tsp45I GTSAC 3 cut(s) 226, 963, 1157
TspMI CCCGGG 1 cut(s) 33
TspRI CASTG 2 cut(s) 125, 1180
VpaK11BI GGWCC 1 cut(s) 30
VspI ATTAAT 1 cut(s) 372
XapI RAATTY 2 cut(s) 698, 985
XbaI TCTAGA 1 cut(s) 979
XhoI CTCGAG 1 cut(s) 278
XmaI CCCGGG 1 cut(s) 33
XmiI GTMKAC 1 cut(s) 751
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 2 cut(s) 252, 980
ZrmI AGTACT 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.