AT1G01480

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
175706 .. 178406
2701 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01480.1

Sequence Viewer

Length: 1491 bp
ATGGGTCTTCCGGGAAAAAATAAAGGTGCAGTTTTGTCGAAGATAGCGACTAACAATCAACACGGAGAGAACTCAGAGTACTTTGATGGATGGAAAGCTTACGACAAAGATCCTTTTCATCTTTCCCGTAACCCCCATGGGATCATCCAAATGGGTCTTGCAGAGAATCAGCTTTGCTTAGATTTGATCAAAGATTGGGTCAAAGAGAACCCAGAAGCTTCTATTTGCACCCTTGAAGGTATTCATCAGTTTAGCGACATCGCTAATTTCCAAGACTACCATGGTCTTAAGAAGTTTAGACAGGCAATTGCACATTTCATGGGAAAAGCTAGAGGTGGAAGAGTGACTTTTGATCCGGAGAGGGTGGTTATGAGCGGAGGAGCCACCGGAGCCAATGAAACAATCATGTTCTGCCTTGCGGATCCCGGCGACGTTTTCCTCATTCCCTCCCCGTACTATGCCGCATTTGATAGAGACTTGAGGTGGCGGACAGGTGTCGAGATAATCCCGGTTCCTTGTTCAAGCTCCGACAATTTCAAATTAACCGTTGACGCCGCGGAATGGGCTTATAAAAAAGCCCAAGAGTCCAATAAAAAAGTCAAAGGTCTGATTTTGACCAACCCATCAAATCCACTCGGTACAATGTTGGATAAGGACACACTCACGAACTTGGTCCGGTTTGTCACGAGGAAGAACATTCACCTAGTCGTCGACGAGATCTACGCCGCCACAGTCTTCGCCGGAGGAGATTTCGTGAGCGTTGCTGAGGTGGTCAATGATGTGGACATCTCCGAAGTCAACGTTGACTTGATTCACATTGTCTATAGTCTTTCTAAAGATATGGGACTTCCTGGTTTTAGAGTCGGGATAGTCTATTCTTTCAATGACTCGGTCGTGTCTTGCGCAAGAAAAATGTCAAGTTTCGGACTTGTTTCGTCTCAGACACAACTCATGCTTGCTTCGATGTTGTCCGATGATCAGTTTGTGGATAATTTTCTAATGGAAAGCTCGAGAAGGTTGGGGATAAGGCATAAAGTTTTTACCACGGGGATCAAGAAAGCAGATATTGCTTGTTTGACAAGCAACGCTGGTTTATTTGCGTGGATGGATTTGAGACATCTACTGAGAGATCGTAACTCGTTTGAATCTGAGATCGAGCTTTGGCATATAATCATCGATAGAGTTAAGCTCAATGTGTCTCCTGGCTCTTCCTTCCGTTGCACGGAACCTGGATGGTTTAGGATTTGCTTTGCCAACATGGACGATGATACTCTCCATGTGGCGCTTGGACGGATCCAAGATTTCGTGTCTAAGAACAAGAACAAGATCGTCGAGAAAGCATCTGAAAATGATCAGGTAATCCAGAACAAGAGTGCTAAAAAGCTGAAATGGACGCAGACCAATCTTCGACTAAGTTTCCGACGACTTTACGAGGATGGTCTCTCGTCTCCAGGGATAATGTCACCACACTCACCTCTTCTCCGAGCATGA

Protein Analysis

496

Amino Acids

55.53

Weight (kDa)

7.2

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 49 - 432 4.9e-111 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 570
Acc16I TGCGCA 1 cut(s) 904
AccBSI CCGCTC 1 cut(s) 375
AccI GTMKAC 1 cut(s) 711
AccII CGCG 1 cut(s) 557
AccIII TCCGGA 1 cut(s) 355
AciI CCGC 7 cut(s) 375, 419, 462, 487, 555, 557, 726
AclI AACGTT 1 cut(s) 801
AclWI GGATC 8 cut(s) 104, 149, 347, 416, 429, 1058, 1288, 1301
AcyI GRCGYC 1 cut(s) 552
AfaI GTAC 3 cut(s) 80, 455, 640
AfiI CCNNNNNNNGG 2 cut(s) 561, 1222
AflII CTTAAG 1 cut(s) 287
AgsI TTSAA 5 cut(s) 236, 522, 538, 883, 1145
AjnI CCWGG 4 cut(s) 850, 1201, 1228, 1450
AluBI AGCT 9 cut(s) 98, 172, 218, 329, 525, 1008, 1159, 1189, 1384
AluI AGCT 9 cut(s) 98, 172, 218, 329, 525, 1008, 1159, 1189, 1384
Alw26I GTCTC 6 cut(s) 468, 942, 1108, 1203, 1445, 1452
AlwI GGATC 8 cut(s) 104, 149, 347, 416, 429, 1058, 1288, 1301
Ama87I CYCGRG 1 cut(s) 1009
Aor13HI TCCGGA 1 cut(s) 355
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
Asp700I GAANNNNTTC 1 cut(s) 240
AspLEI GCGC 2 cut(s) 905, 1285
AspS9I GGNCC 1 cut(s) 673
AsuC2I CCSGG 3 cut(s) 12, 426, 509
AsuHPI GGTGA 3 cut(s) 692, 1455, 1464
AvaI CYCGRG 1 cut(s) 1009
AvaII GGWCC 1 cut(s) 673
BamHI GGATCC 2 cut(s) 421, 1293
BauI CACGAG 1 cut(s) 685
BbsI GAAGAC 1 cut(s) 727
BbvCI CCTCAGC 1 cut(s) 765
BccI CCATC 6 cut(s) 80, 84, 631, 1099, 1227, 1430
BcgI CGANNNNNNTGC 2 cut(s) 18, 52
BciT130I CCWGG 4 cut(s) 852, 1203, 1230, 1452
BclI TGATCA 3 cut(s) 186, 976, 1351
BcnI CCSGG 3 cut(s) 12, 426, 509
BcoDI GTCTC 6 cut(s) 468, 942, 1108, 1203, 1445, 1452
BfaI CTAG 2 cut(s) 330, 704
BfmI CTRYAG 1 cut(s) 823
BfoI RGCGCY 1 cut(s) 1286
BfrI CTTAAG 1 cut(s) 287
BglII AGATCT 1 cut(s) 717
BisI GCNGC 3 cut(s) 462, 555, 726
BlsI GCNGC 3 cut(s) 463, 556, 727
BmcAI AGTACT 1 cut(s) 80
Bme1390I CCNGG 7 cut(s) 12, 426, 509, 852, 1203, 1230, 1452
Bme18I GGWCC 1 cut(s) 673
BmeT110I CYCGRG 1 cut(s) 1009
BmgT120I GGNCC 1 cut(s) 673
BmiI GGNNCC 6 cut(s) 382, 391, 423, 513, 1227, 1295
BmrFI CCNGG 7 cut(s) 12, 426, 509, 852, 1203, 1230, 1452
BmsI GCATC 1 cut(s) 1349
BoxI GACNNNNGTC 1 cut(s) 494
BpiI GAAGAC 1 cut(s) 727
BplI GAGNNNNNCTC 2 cut(s) 1173, 1205
BpmI CTGGAG 1 cut(s) 1434
Bpu10I CCTNAGC 1 cut(s) 765
BpuEI CTTGAG 1 cut(s) 499
BpuMI CCSGG 3 cut(s) 12, 426, 509
Bsa29I ATCGAT 1 cut(s) 1176
BsaHI GRCGYC 1 cut(s) 552
BsaI GGTCTC 1 cut(s) 1445
BsaJI CCNNGG 5 cut(s) 136, 280, 555, 1044, 1451
BsaWI WCCGGW 3 cut(s) 355, 386, 675
BsaXI ACNNNNNCTCC 3 cut(s) 738, 768, 1464
Bsc4I CCNNNNNNNGG 2 cut(s) 561, 1222
BseAI TCCGGA 1 cut(s) 355
BseBI CCWGG 4 cut(s) 852, 1203, 1230, 1452
BseCI ATCGAT 1 cut(s) 1176
BseDI CCNNGG 5 cut(s) 136, 280, 555, 1044, 1451
BseGI GGATG 5 cut(s) 95, 144, 1110, 1238, 1441
BseLI CCNNNNNNNGG 2 cut(s) 561, 1222
BseMII CTCAG 5 cut(s) 87, 756, 953, 1115, 1140
BseRI GAGGAG 2 cut(s) 393, 759
BsgI GTGCAG 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 557
Bsh1285I CGRYCG 1 cut(s) 894
BshVI ATCGAT 1 cut(s) 1176
BsiEI CGRYCG 1 cut(s) 894
BsiHKCI CYCGRG 1 cut(s) 1009
BsiSI CCGG 7 cut(s) 11, 356, 387, 426, 509, 676, 741
BslFI GGGAC 1 cut(s) 858
BslI CCNNNNNNNGG 2 cut(s) 561, 1222
BsmAI GTCTC 6 cut(s) 468, 942, 1108, 1203, 1445, 1452
BsmBI CGTCTC 2 cut(s) 942, 1452
BsmFI GGGAC 1 cut(s) 858
Bso31I GGTCTC 1 cut(s) 1445
BsoBI CYCGRG 1 cut(s) 1009
Bsp13I TCCGGA 1 cut(s) 355
Bsp19I CCATGG 2 cut(s) 136, 280
BspACI CCGC 7 cut(s) 375, 419, 462, 487, 555, 557, 726
BspCNI CTCAG 5 cut(s) 86, 757, 952, 1116, 1141
BspDI ATCGAT 1 cut(s) 1176
BspEI TCCGGA 1 cut(s) 355
BspFNI CGCG 1 cut(s) 557
BspLI GGNNCC 6 cut(s) 382, 391, 423, 513, 1227, 1295
BspPI GGATC 8 cut(s) 104, 149, 347, 416, 429, 1058, 1288, 1301
BspQI GCTCTTC 1 cut(s) 1213
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 1445
BsrBI CCGCTC 1 cut(s) 375
BssECI CCNNGG 5 cut(s) 136, 280, 555, 1044, 1451
BssNI GRCGYC 1 cut(s) 552
BssSI CACGAG 1 cut(s) 685
BssT1I CCWWGG 2 cut(s) 136, 280
Bst2BI CACGAG 1 cut(s) 685
Bst2UI CCWGG 4 cut(s) 852, 1203, 1230, 1452
Bst4CI ACNGT 2 cut(s) 547, 733
Bst6I CTCTTC 3 cut(s) 334, 1213, 1482
BstACI GRCGYC 1 cut(s) 552
BstAFI CTTAAG 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 1067
BstC8I GCNNGC 1 cut(s) 957
BstDEI CTNAG 8 cut(s) 73, 178, 765, 939, 1124, 1149, 1311, 1412
BstDSI CCRYGG 4 cut(s) 136, 280, 555, 1044
BstF5I GGATG 5 cut(s) 95, 144, 1110, 1238, 1441
BstFNI CGCG 1 cut(s) 557
BstH2I RGCGCY 1 cut(s) 1286
BstHHI GCGC 2 cut(s) 905, 1285
BstMAI GTCTC 6 cut(s) 468, 942, 1108, 1203, 1445, 1452
BstMCI CGRYCG 1 cut(s) 894
BstMWI GCNNNNNNNGC 3 cut(s) 389, 563, 1067
BstNI CCWGG 4 cut(s) 852, 1203, 1230, 1452
BstPAI GACNNNNGTC 1 cut(s) 494
BstSCI CCNGG 7 cut(s) 10, 424, 507, 850, 1201, 1228, 1450
BstSFI CTRYAG 1 cut(s) 823
BstUI CGCG 1 cut(s) 557
BstV2I GAAGAC 1 cut(s) 727
BstX2I RGATCY 4 cut(s) 109, 421, 717, 1293
BstYI RGATCY 4 cut(s) 109, 421, 717, 1293
Bsu15I ATCGAT 1 cut(s) 1176
BsuTUI ATCGAT 1 cut(s) 1176
BtgI CCRYGG 4 cut(s) 136, 280, 555, 1044
BtgZI GCGATG 1 cut(s) 244
BtsCI GGATG 5 cut(s) 95, 144, 1110, 1238, 1441
Cac8I GCNNGC 1 cut(s) 957
CfoI GCGC 2 cut(s) 905, 1285
Cfr13I GGNCC 1 cut(s) 673
Cfr42I CCGCGG 1 cut(s) 558
ClaI ATCGAT 1 cut(s) 1176
CseI GACGC 2 cut(s) 560, 1402
Csp6I GTAC 3 cut(s) 79, 454, 639
CviAII CATG 8 cut(s) 137, 281, 319, 406, 952, 1258, 1277, 1488
CviQI GTAC 3 cut(s) 79, 454, 639
DdeI CTNAG 8 cut(s) 73, 178, 765, 939, 1124, 1149, 1311, 1412
Eam1104I CTCTTC 3 cut(s) 334, 1213, 1482
EarI CTCTTC 3 cut(s) 334, 1213, 1482
EciI GGCGGA 1 cut(s) 502
Eco130I CCWWGG 2 cut(s) 136, 280
Eco31I GGTCTC 1 cut(s) 1445
Eco47I GGWCC 1 cut(s) 673
Eco88I CYCGRG 1 cut(s) 1009
EcoRII CCWGG 4 cut(s) 850, 1201, 1228, 1450
EcoT14I CCWWGG 2 cut(s) 136, 280
ErhI CCWWGG 2 cut(s) 136, 280
Esp3I CGTCTC 2 cut(s) 942, 1452
FaeI CATG 8 cut(s) 140, 284, 322, 409, 955, 1261, 1280, 1491
FalI AAGNNNNNCTT 2 cut(s) 331, 363
FaqI GGGAC 1 cut(s) 858
FatI CATG 8 cut(s) 136, 280, 318, 405, 951, 1257, 1276, 1487
FbaI TGATCA 3 cut(s) 186, 976, 1351
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 3 cut(s) 462, 555, 726
FokI GGATG 5 cut(s) 102, 131, 1117, 1245, 1448
Fsp4HI GCNGC 3 cut(s) 462, 555, 726
FspBI CTAG 2 cut(s) 330, 704
FspI TGCGCA 1 cut(s) 904
GlaI GCGC 2 cut(s) 904, 1284
GluI GCNGC 3 cut(s) 462, 555, 726
GsuI CTGGAG 1 cut(s) 1434
HaeII RGCGCY 1 cut(s) 1286
HapII CCGG 7 cut(s) 11, 356, 387, 426, 509, 676, 741
HgaI GACGC 2 cut(s) 560, 1402
HhaI GCGC 2 cut(s) 905, 1285
Hin1I GRCGYC 1 cut(s) 552
Hin1II CATG 8 cut(s) 140, 284, 322, 409, 955, 1261, 1280, 1491
Hin6I GCGC 2 cut(s) 903, 1283
HinP1I GCGC 2 cut(s) 903, 1283
HincII GTYRAC 4 cut(s) 550, 712, 799, 805
HindII GTYRAC 4 cut(s) 550, 712, 799, 805
HindIII AAGCTT 2 cut(s) 96, 216
HinfI GANTC 6 cut(s) 166, 584, 811, 861, 887, 1145
HpaII CCGG 7 cut(s) 11, 356, 387, 426, 509, 676, 741
HphI GGTGA 3 cut(s) 692, 1455, 1464
Hpy166II GTNNAC 5 cut(s) 550, 712, 784, 799, 805
Hpy8I GTNNAC 5 cut(s) 550, 712, 784, 799, 805
Hpy99I CGWCG 5 cut(s) 434, 713, 716, 1334, 1425
HpyAV CCTTC 3 cut(s) 230, 1008, 1222
HpyCH4III ACNGT 2 cut(s) 547, 733
HpyCH4IV ACGT 2 cut(s) 432, 801
HpyCH4V TGCA 5 cut(s) 29, 161, 228, 311, 1221
HpyF10VI GCNNNNNNNGC 3 cut(s) 389, 563, 1067
HpyF3I CTNAG 8 cut(s) 73, 178, 765, 939, 1124, 1149, 1311, 1412
HpySE526I ACGT 2 cut(s) 432, 801
Hsp92I GRCGYC 1 cut(s) 552
Hsp92II CATG 8 cut(s) 140, 284, 322, 409, 955, 1261, 1280, 1491
HspAI GCGC 2 cut(s) 903, 1283
Kpn2I TCCGGA 1 cut(s) 355
Ksp22I TGATCA 3 cut(s) 186, 976, 1351
KspI CCGCGG 1 cut(s) 558
LguI GCTCTTC 1 cut(s) 1213
LmnI GCTCC 3 cut(s) 380, 389, 530
LweI GCATC 1 cut(s) 1349
MaeI CTAG 2 cut(s) 330, 704
MaeII ACGT 2 cut(s) 432, 801
MaeIII GTNAC 5 cut(s) 128, 343, 682, 1133, 1461
MbiI CCGCTC 1 cut(s) 375
MboII GAAGA 7 cut(s) 52, 351, 703, 727, 1200, 1397, 1469
MfeI CAATTG 1 cut(s) 306
MflI RGATCY 4 cut(s) 109, 421, 717, 1293
MluCI AATT 5 cut(s) 265, 306, 532, 539, 991
MlyI GAGTC 3 cut(s) 593, 870, 881
MmeI TCCRAC 3 cut(s) 552, 627, 1444
MroI TCCGGA 1 cut(s) 355
MroXI GAANNNNTTC 1 cut(s) 240
MseI TTAA 3 cut(s) 288, 542, 1185
MslI CAYNNNNRTG 1 cut(s) 149
MspA1I CMGCKG 1 cut(s) 557
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 7 cut(s) 11, 356, 387, 426, 509, 676, 741
MspR9I CCNGG 7 cut(s) 12, 426, 509, 852, 1203, 1230, 1452
MunI CAATTG 1 cut(s) 306
MvaI CCWGG 4 cut(s) 852, 1203, 1230, 1452
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 3 cut(s) 389, 563, 1067
NciI CCSGG 3 cut(s) 12, 426, 509
NcoI CCATGG 2 cut(s) 136, 280
NlaIII CATG 8 cut(s) 140, 284, 322, 409, 955, 1261, 1280, 1491
NlaIV GGNNCC 6 cut(s) 382, 391, 423, 513, 1227, 1295
NmuCI GTSAC 3 cut(s) 343, 682, 1461
NsbI TGCGCA 1 cut(s) 904
PaeR7I CTCGAG 1 cut(s) 1009
PciSI GCTCTTC 1 cut(s) 1213
PcsI WCGNNNNNNNCGW 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 3 cut(s) 166, 811, 1145
PflFI GACNNNGTC 1 cut(s) 890
PfoI TCCNGGA 1 cut(s) 10
PkrI GCNGC 3 cut(s) 463, 556, 727
PleI GAGTC 3 cut(s) 592, 869, 881
PpsI GAGTC 3 cut(s) 592, 869, 881
PshAI GACNNNNGTC 1 cut(s) 494
PsiI TTATAA 1 cut(s) 570
Psp1406I AACGTT 1 cut(s) 801
Psp6I CCWGG 4 cut(s) 850, 1201, 1228, 1450
PspGI CCWGG 4 cut(s) 850, 1201, 1228, 1450
PspN4I GGNNCC 6 cut(s) 382, 391, 423, 513, 1227, 1295
PspPI GGNCC 1 cut(s) 673
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PsuI RGATCY 4 cut(s) 109, 421, 717, 1293
PsyI GACNNNGTC 1 cut(s) 890
RsaI GTAC 3 cut(s) 80, 455, 640
RsaNI GTAC 3 cut(s) 79, 454, 639
RseI CAYNNNNRTG 1 cut(s) 149
SacII CCGCGG 1 cut(s) 558
SalI GTCGAC 1 cut(s) 710
SapI GCTCTTC 1 cut(s) 1213
SaqAI TTAA 3 cut(s) 288, 542, 1185
SatI GCNGC 3 cut(s) 462, 555, 726
Sau96I GGNCC 1 cut(s) 673
ScaI AGTACT 1 cut(s) 80
SchI GAGTC 3 cut(s) 593, 870, 881
ScrFI CCNGG 7 cut(s) 12, 426, 509, 852, 1203, 1230, 1452
SfaNI GCATC 1 cut(s) 1349
SfcI CTRYAG 1 cut(s) 823
Sfr274I CTCGAG 1 cut(s) 1009
Sfr303I CCGCGG 1 cut(s) 558
SgrBI CCGCGG 1 cut(s) 558
SgrDI CGTCGACG 1 cut(s) 710
SinI GGWCC 1 cut(s) 673
SlaI CTCGAG 1 cut(s) 1009
SmiMI CAYNNNNRTG 1 cut(s) 149
SmlI CTYRAG 3 cut(s) 287, 478, 1009
SmoI CTYRAG 3 cut(s) 287, 478, 1009
Sse9I AATT 5 cut(s) 265, 306, 532, 539, 991
SsiI CCGC 7 cut(s) 375, 419, 462, 487, 555, 557, 726
SspMI CTAG 2 cut(s) 330, 704
StyD4I CCNGG 7 cut(s) 10, 424, 507, 850, 1201, 1228, 1450
StyI CCWWGG 2 cut(s) 136, 280
TaaI ACNGT 2 cut(s) 547, 733
TaiI ACGT 2 cut(s) 435, 804
TaqI TCGA 9 cut(s) 38, 498, 711, 962, 1010, 1155, 1176, 1332, 1408
TaqII GACCGA 1 cut(s) 880
TasI AATT 5 cut(s) 265, 306, 532, 539, 991
TatI WGTACW 1 cut(s) 78
TauI GCSGC 3 cut(s) 464, 557, 728
TfiI GAWTC 3 cut(s) 166, 811, 1145
Tru1I TTAA 3 cut(s) 288, 542, 1185
Tru9I TTAA 3 cut(s) 288, 542, 1185
TseFI GTSAC 3 cut(s) 343, 682, 1461
Tsp45I GTSAC 3 cut(s) 343, 682, 1461
TspDTI ATGAA 4 cut(s) 107, 233, 307, 411
TspGWI ACGGA 4 cut(s) 78, 1205, 1238, 1306
Tth111I GACNNNGTC 1 cut(s) 890
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 673
XcmI CCANNNNNNNNNTGG 2 cut(s) 278, 1283
XhoI CTCGAG 1 cut(s) 1009
XmiI GTMKAC 1 cut(s) 711
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 2 cut(s) 330, 704
ZrmI AGTACT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.