MD00G1167500.v1.1

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
38484124 .. 38487736
3613 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1167500.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGGCATCATCTGCAAGTGAACATAGCTTACTGCTATCGAAGATTGCAACCAATGAACAACATGGTGAGAACTCGCCGTACTTCGACGGATGGAAGGCGTACGATCAAAACCCTTTTCACCCAACTGAAAATCCTGAGGGTGTAATCCAGATGGGCCTTGCAGAAAATCAGCTTTCCCTTGATTTGGTTGAAGAATGGATTAGGAAAAATCCCAAAGCCTCTTTATGCACTGCTGAAGGAGTTGAGAAGTTCAGAAGCGTGGCCAATTTTCAAGATTACCATGGCTTCCCAGAGTTCAGACAGGCCATTGCTACGTTCATGTCGAAAGCAAGAGGTGGCAGAGTCACGTTTGATCCTGACCGCGTAGTGATGAGTGGCGGAGCCACTGGAGCAAACGAGCTGGTCATGTTCTGTTTGGCTGACCCCGGCGATGCTTTCCTTATCCCCTCACCGTACTATCCAGCATTTTACCGAGACCTCGGATGGAGAACTGGAGTCCAAATTGTCCCAGTCGATTGTGATAGCTCCAACAATTTCAAAATAACCAAAGAAGCAGTGGAAGCAGCTTACGAAAAAGCCAAAAACAGCAACATCAATGTGAAGGGCTTGATCATAACAAACCCATCAAATCCATTGGGCACAACCCTTGACAAAGACACACTTGAAAGCCTGGTCGCATTCATAAACCAAAACAACATTCACTTGGTTTGTGATGAAATCTATGCAGCCACAGTCTTCAGCTCCCCAAAATACACATGCATCACCGAGGTCATACAAGACATGGATTGCAATCCCAACCTAATCCACATTGTCTACAGTTTGTCCAAGGACATGGGGTTTCCCGGTTTGAGGGTCGGCATTGTTTACTCCTACAACGATGATGTGGTGAACATCGGTCGAAAAATGTCAAGTTTCGGGCTGGTCTCATCCCAAACACAACACATGCTCGCATCAATGCTATCGGATGAAGATTTTGTCGAGAAGTTCCTTGCGACAAGCTCAAAAAGGCTTGTGAAGAGGCACGGGGTCTTCACGAAGGGGCTTGAGGAAGTGGGAATTAGCTGTTTGAAGAGCAATGCAGGCCTCTTCTGTTGGATGGACTTAAGGAGGCTGTTGAAAGATCAAACATTCGATGGAGAAATGGTGTTGTGGCGTGTGATTGTGAACGAAGTGAAGCTCAACGTTTCGCCGGGCTCTTCGTTTAAATGTGTGGAGCCTGGTTGGTTTAGGGTCTGCTTTGCCAACATGGATGATGACACTGTGGAAGTTGCACTCAAAAGGATTAGGGCACTTGTAGGGCAAGGAAAGAAAGCTCAAGAACAAGCACAAGTGAAAAGTACTAAGAAGCGTTGGCAGAGCAATCTAAGGCTGAGCTTTTCATCGTCAACAAGAAGATTTGAGCAGGAAGGTGTTAGTGTTTTGTCACCACACATGATGTCTCCACATTCACCAATGTCTCACTCGCCTTTCGTTCAAGCTAAAGAGTATTGGGACCTATACTCTAGTGTGTAA

Protein Analysis

504

Amino Acids

56.24

Weight (kDa)

6.05

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 49 - 428 1.8e-107 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 813
AccII CGCG 1 cut(s) 363
AciI CCGC 2 cut(s) 361, 378
AclI AACGTT 1 cut(s) 1182
AclWI GGATC 1 cut(s) 347
AcoI YGGCCR 1 cut(s) 261
AcuI CTGAAG 2 cut(s) 255, 721
AfaI GTAC 4 cut(s) 80, 101, 455, 1339
AfiI CCNNNNNNNGG 2 cut(s) 184, 849
AflII CTTAAG 1 cut(s) 1102
AgsI TTSAA 7 cut(s) 191, 272, 538, 665, 1069, 1117, 1475
AjnI CCWGG 2 cut(s) 669, 1216
AjuI GAANNNNNNNTTGG 2 cut(s) 681, 713
Alw26I GTCTC 4 cut(s) 468, 928, 1443, 1461
AlwI GGATC 1 cut(s) 347
AoxI GGCC 4 cut(s) 154, 261, 303, 1081
ApeKI GCWGC 2 cut(s) 563, 725
AspS9I GGNCC 2 cut(s) 154, 1492
AsuC2I CCSGG 3 cut(s) 426, 843, 1191
AsuHPI GGTGA 7 cut(s) 77, 110, 441, 754, 898, 1416, 1440
AvaII GGWCC 1 cut(s) 1492
AxyI CCTNAGG 1 cut(s) 135
BaeGI GKGCMC 2 cut(s) 641, 1291
BalI TGGCCA 1 cut(s) 263
BanII GRGCYC 1 cut(s) 1196
BbsI GAAGAC 2 cut(s) 727, 1021
BbvI GCAGC 2 cut(s) 575, 737
BccI CCATC 6 cut(s) 84, 145, 477, 631, 1090, 1127
BceAI ACGGC 1 cut(s) 61
BciT130I CCWGG 2 cut(s) 671, 1218
BclI TGATCA 1 cut(s) 609
BcnI CCSGG 3 cut(s) 426, 843, 1191
BcoDI GTCTC 4 cut(s) 468, 928, 1443, 1461
BfaI CTAG 1 cut(s) 1503
BfmI CTRYAG 1 cut(s) 814
BfrI CTTAAG 1 cut(s) 1102
BisI GCNGC 2 cut(s) 564, 726
BlpI GCTNAGC 1 cut(s) 1370
BlsI GCNGC 2 cut(s) 565, 727
BmcAI AGTACT 1 cut(s) 1339
Bme1390I CCNGG 5 cut(s) 426, 671, 843, 1191, 1218
Bme18I GGWCC 1 cut(s) 1492
BmgT120I GGNCC 2 cut(s) 154, 1492
BmiI GGNNCC 3 cut(s) 382, 1215, 1493
BmrFI CCNGG 5 cut(s) 426, 671, 843, 1191, 1218
BmrI ACTGGG 1 cut(s) 503
BmsI GCATC 4 cut(s) 14, 421, 768, 959
BmuI ACTGGG 1 cut(s) 503
BpiI GAAGAC 2 cut(s) 727, 1021
BpmI CTGGAG 2 cut(s) 408, 513
Bpu1102I GCTNAGC 1 cut(s) 1370
BpuEI CTTGAG 2 cut(s) 1064, 1299
BpuMI CCSGG 3 cut(s) 426, 843, 1191
BsaBI GATNNNNATC 1 cut(s) 789
BsaI GGTCTC 2 cut(s) 468, 928
BsaJI CCNNGG 5 cut(s) 280, 424, 478, 765, 825
BsaXI ACNNNNNCTCC 2 cut(s) 1128, 1158
Bsc4I CCNNNNNNNGG 2 cut(s) 184, 849
Bse1I ACTGG 3 cut(s) 391, 496, 509
Bse21I CCTNAGG 1 cut(s) 135
Bse3DI GCAATG 2 cut(s) 306, 1081
Bse8I GATNNNNATC 1 cut(s) 789
BseBI CCWGG 2 cut(s) 671, 1218
BseDI CCNNGG 5 cut(s) 280, 424, 478, 765, 825
BseGI GGATG 6 cut(s) 95, 488, 926, 970, 1101, 1255
BseJI GATNNNNATC 1 cut(s) 789
BseLI CCNNNNNNNGG 2 cut(s) 184, 849
BseMI GCAATG 2 cut(s) 306, 1081
BseMII CTCAG 2 cut(s) 126, 1361
BseNI ACTGG 3 cut(s) 391, 496, 509
BseSI GKGCMC 2 cut(s) 641, 1291
BseXI GCAGC 2 cut(s) 575, 737
Bsh1236I CGCG 1 cut(s) 363
Bsh1285I CGRYCG 1 cut(s) 898
BshFI GGCC 4 cut(s) 156, 263, 305, 1083
BsiEI CGRYCG 1 cut(s) 898
BsiSI CCGG 3 cut(s) 426, 843, 1190
BsiWI CGTACG 1 cut(s) 99
BslFI GGGAC 2 cut(s) 491, 1505
BslI CCNNNNNNNGG 2 cut(s) 184, 849
BsmAI GTCTC 4 cut(s) 468, 928, 1443, 1461
BsmFI GGGAC 2 cut(s) 491, 1505
BsmI GAATGC 1 cut(s) 677
BsnI GGCC 4 cut(s) 156, 263, 305, 1083
Bso31I GGTCTC 2 cut(s) 468, 928
Bsp1286I GDGCHC 3 cut(s) 641, 1196, 1291
Bsp143I GATC 4 cut(s) 103, 352, 609, 1120
Bsp1720I GCTNAGC 1 cut(s) 1370
Bsp19I CCATGG 1 cut(s) 280
BspACI CCGC 2 cut(s) 361, 378
BspANI GGCC 4 cut(s) 156, 263, 305, 1083
BspCNI CTCAG 2 cut(s) 127, 1362
BspFNI CGCG 1 cut(s) 363
BspLI GGNNCC 3 cut(s) 382, 1215, 1493
BspPI GGATC 1 cut(s) 347
BspQI GCTCTTC 2 cut(s) 1064, 1201
BspTI CTTAAG 1 cut(s) 1102
BspTNI GGTCTC 2 cut(s) 468, 928
BsrDI GCAATG 2 cut(s) 306, 1081
BsrI ACTGG 3 cut(s) 391, 496, 509
BssECI CCNNGG 5 cut(s) 280, 424, 478, 765, 825
BssMI GATC 4 cut(s) 103, 352, 609, 1120
BssT1I CCWWGG 2 cut(s) 280, 825
Bst2UI CCWGG 2 cut(s) 671, 1218
Bst4CI ACNGT 4 cut(s) 453, 733, 818, 1261
Bst6I CTCTTC 4 cut(s) 1010, 1064, 1091, 1201
BstAFI CTTAAG 1 cut(s) 1102
BstAPI GCANNNNNTGC 1 cut(s) 11
BstC8I GCNNGC 2 cut(s) 948, 1081
BstDEI CTNAG 4 cut(s) 135, 1341, 1364, 1370
BstDSI CCRYGG 1 cut(s) 280
BstF5I GGATG 6 cut(s) 95, 488, 926, 970, 1101, 1255
BstFNI CGCG 1 cut(s) 363
BstKTI GATC 4 cut(s) 106, 355, 612, 1123
BstMAI GTCTC 4 cut(s) 468, 928, 1443, 1461
BstMBI GATC 4 cut(s) 103, 352, 609, 1120
BstMCI CGRYCG 1 cut(s) 898
BstMWI GCNNNNNNNGC 4 cut(s) 11, 389, 560, 1080
BstNI CCWGG 2 cut(s) 671, 1218
BstNSI RCATGY 2 cut(s) 759, 946
BstSCI CCNGG 5 cut(s) 424, 669, 841, 1189, 1216
BstSFI CTRYAG 1 cut(s) 814
BstSLI GKGCMC 2 cut(s) 641, 1291
BstUI CGCG 1 cut(s) 363
BstV1I GCAGC 2 cut(s) 575, 737
BstV2I GAAGAC 2 cut(s) 727, 1021
BstXI CCANNNNNNTGG 1 cut(s) 832
Bsu36I CCTNAGG 1 cut(s) 135
BsuRI GGCC 4 cut(s) 156, 263, 305, 1083
BtgI CCRYGG 1 cut(s) 280
BtgZI GCGATG 1 cut(s) 444
BtsCI GGATG 6 cut(s) 95, 488, 926, 970, 1101, 1255
BtsI GCAGTG 2 cut(s) 228, 561
BtsIMutI CAGTG 4 cut(s) 228, 384, 561, 1257
Cac8I GCNNGC 2 cut(s) 948, 1081
Cfr13I GGNCC 2 cut(s) 154, 1492
Csp6I GTAC 4 cut(s) 79, 100, 454, 1338
CviQI GTAC 4 cut(s) 79, 100, 454, 1338
DdeI CTNAG 4 cut(s) 135, 1341, 1364, 1370
DpnI GATC 4 cut(s) 105, 354, 611, 1122
DpnII GATC 4 cut(s) 103, 352, 609, 1120
DraI TTTAAA 1 cut(s) 1204
EaeI YGGCCR 1 cut(s) 261
Eam1104I CTCTTC 4 cut(s) 1010, 1064, 1091, 1201
EarI CTCTTC 4 cut(s) 1010, 1064, 1091, 1201
EciI GGCGGA 1 cut(s) 393
Eco130I CCWWGG 2 cut(s) 280, 825
Eco147I AGGCCT 1 cut(s) 1083
Eco24I GRGCYC 1 cut(s) 1196
Eco31I GGTCTC 2 cut(s) 468, 928
Eco47I GGWCC 1 cut(s) 1492
Eco57I CTGAAG 2 cut(s) 255, 721
Eco81I CCTNAGG 1 cut(s) 135
EcoO109I RGGNCCY 1 cut(s) 1492
EcoRII CCWGG 2 cut(s) 669, 1216
EcoT14I CCWWGG 2 cut(s) 280, 825
EcoT22I ATGCAT 1 cut(s) 761
EcoT38I GRGCYC 1 cut(s) 1196
ErhI CCWWGG 2 cut(s) 280, 825
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 2 cut(s) 491, 1505
FbaI TGATCA 1 cut(s) 609
FblI GTMKAC 1 cut(s) 813
Fnu4HI GCNGC 2 cut(s) 564, 726
FokI GGATG 6 cut(s) 102, 495, 913, 977, 1108, 1262
FriOI GRGCYC 1 cut(s) 1196
Fsp4HI GCNGC 2 cut(s) 564, 726
FspBI CTAG 1 cut(s) 1503
GluI GCNGC 2 cut(s) 564, 726
GsuI CTGGAG 2 cut(s) 408, 513
HaeIII GGCC 4 cut(s) 156, 263, 305, 1083
HapII CCGG 3 cut(s) 426, 843, 1190
HincII GTYRAC 1 cut(s) 1386
HindII GTYRAC 1 cut(s) 1386
HinfI GANTC 2 cut(s) 342, 495
HpaII CCGG 3 cut(s) 426, 843, 1190
HphI GGTGA 7 cut(s) 77, 110, 441, 754, 898, 1416, 1440
Hpy166II GTNNAC 6 cut(s) 20, 814, 865, 889, 1165, 1386
Hpy188I TCNGA 4 cut(s) 254, 299, 482, 964
Hpy188III TCNNGA 7 cut(s) 134, 148, 272, 356, 979, 1033, 1316
Hpy8I GTNNAC 6 cut(s) 20, 814, 865, 889, 1165, 1386
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 5 cut(s) 88, 230, 595, 1030, 1400
HpyCH4III ACNGT 4 cut(s) 453, 733, 818, 1261
HpyCH4IV ACGT 3 cut(s) 314, 347, 1182
HpyCH4V TGCA 9 cut(s) 14, 47, 161, 228, 725, 759, 789, 1079, 1271
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 389, 560, 1080
HpyF3I CTNAG 4 cut(s) 135, 1341, 1364, 1370
HpySE526I ACGT 3 cut(s) 314, 347, 1182
Ksp22I TGATCA 1 cut(s) 609
Kzo9I GATC 4 cut(s) 103, 352, 609, 1120
LguI GCTCTTC 2 cut(s) 1064, 1201
LmnI GCTCC 5 cut(s) 380, 389, 530, 746, 1213
Lsp1109I GCAGC 2 cut(s) 575, 737
LweI GCATC 4 cut(s) 14, 421, 768, 959
MaeI CTAG 1 cut(s) 1503
MaeII ACGT 3 cut(s) 314, 347, 1182
MaeIII GTNAC 2 cut(s) 343, 1422
MalI GATC 4 cut(s) 105, 354, 611, 1122
MboI GATC 4 cut(s) 103, 352, 609, 1120
MhlI GDGCHC 3 cut(s) 641, 1196, 1291
MlsI TGGCCA 1 cut(s) 263
MluCI AATT 4 cut(s) 265, 501, 532, 1056
MluNI TGGCCA 1 cut(s) 263
MlyI GAGTC 2 cut(s) 351, 504
MmeI TCCRAC 2 cut(s) 552, 1073
Mox20I TGGCCA 1 cut(s) 263
Mph1103I ATGCAT 1 cut(s) 761
MscI TGGCCA 1 cut(s) 263
MseI TTAA 2 cut(s) 1103, 1203
MslI CAYNNNNRTG 1 cut(s) 596
Msp20I TGGCCA 1 cut(s) 263
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 3 cut(s) 426, 843, 1190
MspR9I CCNGG 5 cut(s) 426, 671, 843, 1191, 1218
Mva1269I GAATGC 1 cut(s) 677
MvaI CCWGG 2 cut(s) 671, 1218
MvnI CGCG 1 cut(s) 363
MwoI GCNNNNNNNGC 4 cut(s) 11, 389, 560, 1080
NciI CCSGG 3 cut(s) 426, 843, 1191
NcoI CCATGG 1 cut(s) 280
NdeII GATC 4 cut(s) 103, 352, 609, 1120
NlaIV GGNNCC 3 cut(s) 382, 1215, 1493
NmuCI GTSAC 2 cut(s) 343, 1422
NsiI ATGCAT 1 cut(s) 761
NspI RCATGY 2 cut(s) 759, 946
PceI AGGCCT 1 cut(s) 1083
PciSI GCTCTTC 2 cut(s) 1064, 1201
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PctI GAATGC 1 cut(s) 677
Pfl23II CGTACG 1 cut(s) 99
PkrI GCNGC 2 cut(s) 565, 727
PleI GAGTC 2 cut(s) 350, 503
PpsI GAGTC 2 cut(s) 350, 503
PpuMI RGGWCCY 1 cut(s) 1492
Psp1406I AACGTT 1 cut(s) 1182
Psp5II RGGWCCY 1 cut(s) 1492
Psp6I CCWGG 2 cut(s) 669, 1216
PspGI CCWGG 2 cut(s) 669, 1216
PspLI CGTACG 1 cut(s) 99
PspN4I GGNNCC 3 cut(s) 382, 1215, 1493
PspPI GGNCC 2 cut(s) 154, 1492
PspPPI RGGWCCY 1 cut(s) 1492
PsrI GAACNNNNNNTAC 4 cut(s) 12, 44, 62, 94
RsaI GTAC 4 cut(s) 80, 101, 455, 1339
RsaNI GTAC 4 cut(s) 79, 100, 454, 1338
RseI CAYNNNNRTG 1 cut(s) 596
SapI GCTCTTC 2 cut(s) 1064, 1201
SaqAI TTAA 2 cut(s) 1103, 1203
SatI GCNGC 2 cut(s) 564, 726
Sau3AI GATC 4 cut(s) 103, 352, 609, 1120
Sau96I GGNCC 2 cut(s) 154, 1492
ScaI AGTACT 1 cut(s) 1339
SchI GAGTC 2 cut(s) 351, 504
ScrFI CCNGG 5 cut(s) 426, 671, 843, 1191, 1218
SduI GDGCHC 3 cut(s) 641, 1196, 1291
SfaNI GCATC 4 cut(s) 14, 421, 768, 959
SfcI CTRYAG 1 cut(s) 814
SinI GGWCC 1 cut(s) 1492
SmiMI CAYNNNNRTG 1 cut(s) 596
SmlI CTYRAG 3 cut(s) 1043, 1102, 1314
SmoI CTYRAG 3 cut(s) 1043, 1102, 1314
Sse9I AATT 4 cut(s) 265, 501, 532, 1056
SseBI AGGCCT 1 cut(s) 1083
SsiI CCGC 2 cut(s) 361, 378
SspMI CTAG 1 cut(s) 1503
StuI AGGCCT 1 cut(s) 1083
StyD4I CCNGG 5 cut(s) 424, 669, 841, 1189, 1216
StyI CCWWGG 2 cut(s) 280, 825
TaaI ACNGT 4 cut(s) 453, 733, 818, 1261
TaiI ACGT 3 cut(s) 317, 350, 1185
TaqI TCGA 7 cut(s) 38, 84, 323, 513, 898, 978, 1131
TaqII GACCGA 1 cut(s) 884
TasI AATT 4 cut(s) 265, 501, 532, 1056
TatI WGTACW 1 cut(s) 1337
Tru1I TTAA 2 cut(s) 1103, 1203
Tru9I TTAA 2 cut(s) 1103, 1203
TscAI CASTG 4 cut(s) 235, 391, 561, 1264
TseFI GTSAC 2 cut(s) 343, 1422
TseI GCWGC 2 cut(s) 563, 725
Tsp45I GTSAC 2 cut(s) 343, 1422
TspDTI ATGAA 6 cut(s) 69, 307, 670, 729, 981, 1368
TspGWI ACGGA 1 cut(s) 102
TspRI CASTG 4 cut(s) 235, 391, 561, 1264
Vha464I CTTAAG 1 cut(s) 1102
VpaK11BI GGWCC 1 cut(s) 1492
XceI RCATGY 2 cut(s) 759, 946
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XmiI GTMKAC 1 cut(s) 813
XspI CTAG 1 cut(s) 1503
ZrmI AGTACT 1 cut(s) 1339
Zsp2I ATGCAT 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.