RLG00000028012

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
17673844 .. 17676369
2526 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028012

Sequence Viewer

Length: 1476 bp
ATGGCCTCGAACTCACTCTTGTCAAAGATTGCAACCAATGAAGGACATGGCGAGAACTTGGCTTACTTCGATGGATGGAAGGCGTATGACAGAAACCCATTTCACCCGACTCAGAACCCCGAGGGTGTTATTCAGATGGGTCTTGCAGAAAATCAGCTTTCTTTTGACGTGATTGAAGAGTGGATTAAGAAAAATCCTGAGGCCTCCATTTGCACTCCCGAAGGAGTTGGGGAGTTCAAAAATGTAGCCAACTTTCAAGACTATCATGGCTTTCCAGACTTCAGAAAGGCTATTGCTAACTTCATGTCAAAGGCGAGAGGAGGCAGAGTCAAATTTGATCCTGATCGCGTAGTCATGGCCGGCGGAGCCACTGGAGCTAACGAGACGGTCATGTTTTGCTTGGCTGACCCTGGAGATGCTTTCCTAGTTCCCTCTCCTTACTATCCAGCGTTCTACCGAGACTTGGGGTGGCGAACGGGAGTGAAAATTGTTCCAGTCGATTGTGATAGCTCAAACAATTTCCAAGTGACCAGAGCAGCACTTGAAGCAGCCTATGAAAAGGCCCGAAACAACAACATCAACATAAAGGGCTTGATCATAACAAACCCTTCAAACCCATTGGGGACAACCGTAGACAGAGACACACTCACTAGCTTGGTCAAATTCATCAATGACAAGAACATCCACTTGGTCTGCGACGAAATATACGCAGGCACAGTGTTCAGCTGCCCAAAATTCACTTGCGTTACAGAGGTCCTACAAGACGTGAAGAATTGCAACAGCGATTTGATTCACATTGTCTATAGCTTGTCCAAGGACATGGGTGTCCCCGGCTTAAGGATCGGGATCGTTTACTCCTACAACAACGCCGTCATGAACTGCGCTCGCAAGATGTCGAGTTTCGGCTTGGTCTCCTCCCAAACTCAACACATGCTCTCCGCCATGCTTCTGGACGATGAATTTGTCTCCAACTTCCTTGAGACCAGCTCTAAGAGGCTGGAGAGGAGGCACAGGATTTTCACTACGGGGCTCGAAAAGGTAGGCATCAACTGCTTGAAAGGCAATGCTGGGCTCTTTTGCTGGATGGACTTGAGGAAGCTGCTCAAAGACCAAACTTTCGAGGCGGAAATGGTGCTGTGGCGTATGATTATCAACGAAGTGAAGCTCAACGTTTCGCCGGGGTCTTCCTTCCGTTGCGTGGAGCCCGGTTGGTTTAGGGTTTGCTTCGCGAACATGGATGAGCATACAGTTGAAGTTGCATTGGAGAGGATTAGAGCATTCGTGGGAGTAGAAGGAAACAAGAAGAGTAATAATGCAGATCACCAGATGTTTGTGAACAGTCCTAGGAAGAACCGTCGGCAAGACGGACTGAGTCTTAGCTTTCCAGCAACAAGAAGATATGAAGAGGTCATGTCCCCTCGTATGATATCTCCTCATTCACCAATGCCTCGCTCGCCTCTGCTTCGAGCAAGTTAA

Protein Analysis

492

Amino Acids

55.07

Weight (kDa)

7.92

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 44 - 424 5e-108 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 824
AccI GTMKAC 1 cut(s) 633
AccII CGCG 2 cut(s) 348, 1229
AciI CCGC 3 cut(s) 363, 939, 1124
AclI AACGTT 1 cut(s) 1170
AclWI GGATC 3 cut(s) 332, 848, 854
AcoI YGGCCR 1 cut(s) 357
AcsI RAATTY 4 cut(s) 332, 662, 734, 959
AcuI CTGAAG 1 cut(s) 265
AfiI CCNNNNNNNGG 3 cut(s) 463, 837, 1198
AflII CTTAAG 1 cut(s) 835
AgsI TTSAA 7 cut(s) 176, 238, 257, 545, 612, 1057, 1253
AjiI CACGTC 2 cut(s) 169, 766
AjnI CCWGG 1 cut(s) 409
AjuI GAANNNNNNNTTGG 2 cut(s) 671, 703
Alw26I GTCTC 6 cut(s) 377, 453, 633, 916, 970, 974
AlwI GGATC 3 cut(s) 332, 848, 854
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 4 cut(s) 3, 201, 357, 561
ApeKI GCWGC 4 cut(s) 536, 548, 726, 1099
ApoI RAATTY 4 cut(s) 332, 662, 734, 959
ArsI GACNNNNNNTTYG 4 cut(s) 944, 976, 1100, 1132
AspA2I CCTAGG 1 cut(s) 1343
AspLEI GCGC 1 cut(s) 884
AspS9I GGNCC 2 cut(s) 562, 754
AsuC2I CCSGG 3 cut(s) 831, 1179, 1206
AsuHPI GGTGA 3 cut(s) 95, 1313, 1431
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 1 cut(s) 754
AvrII CCTAGG 1 cut(s) 1343
AxyI CCTNAGG 1 cut(s) 198
BanII GRGCYC 3 cut(s) 1032, 1074, 1206
BbsI GAAGAC 1 cut(s) 1176
BbvI GCAGC 4 cut(s) 548, 560, 713, 1086
BccI CCATC 4 cut(s) 65, 69, 130, 1078
BceAI ACGGC 1 cut(s) 854
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 1 cut(s) 594
BcnI CCSGG 3 cut(s) 831, 1179, 1206
BcoDI GTCTC 6 cut(s) 377, 453, 633, 916, 970, 974
BfaI CTAG 3 cut(s) 425, 651, 1344
BfmI CTRYAG 1 cut(s) 802
BfrI CTTAAG 1 cut(s) 835
BisI GCNGC 4 cut(s) 537, 549, 727, 1100
BlnI CCTAGG 1 cut(s) 1343
BlsI GCNGC 4 cut(s) 538, 550, 728, 1101
Bme1390I CCNGG 4 cut(s) 411, 831, 1179, 1206
Bme18I GGWCC 1 cut(s) 754
BmeT110I CYCGRG 1 cut(s) 119
BmgBI CACGTC 2 cut(s) 169, 766
BmgT120I GGNCC 2 cut(s) 562, 754
BmiI GGNNCC 2 cut(s) 367, 1203
BmrFI CCNGG 4 cut(s) 411, 831, 1179, 1206
BmsI GCATC 2 cut(s) 406, 1053
BpiI GAAGAC 1 cut(s) 1176
BplI GAGNNNNNCTC 4 cut(s) 630, 662, 971, 1003
BpmI CTGGAG 3 cut(s) 393, 432, 1019
BpuEI CTTGAG 2 cut(s) 998, 1111
BpuMI CCSGG 3 cut(s) 831, 1179, 1206
BsaBI GATNNNNATC 2 cut(s) 342, 845
BsaI GGTCTC 2 cut(s) 916, 974
BsaJI CCNNGG 6 cut(s) 120, 409, 813, 829, 1178, 1343
BsaXI ACNNNNNCTCC 4 cut(s) 312, 342, 920, 950
Bsc4I CCNNNNNNNGG 3 cut(s) 463, 837, 1198
Bse118I RCCGGY 1 cut(s) 359
Bse1I ACTGG 2 cut(s) 376, 494
Bse21I CCTNAGG 1 cut(s) 198
Bse3DI GCAATG 1 cut(s) 1069
Bse8I GATNNNNATC 2 cut(s) 342, 845
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 6 cut(s) 120, 409, 813, 829, 1178, 1343
BseGI GGATG 4 cut(s) 80, 681, 1089, 1243
BseJI GATNNNNATC 2 cut(s) 342, 845
BseLI CCNNNNNNNGG 3 cut(s) 463, 837, 1198
BseMI GCAATG 1 cut(s) 1069
BseMII CTCAG 3 cut(s) 125, 189, 1361
BseNI ACTGG 2 cut(s) 376, 494
BseRI GAGGAG 4 cut(s) 333, 904, 1018, 1422
BseXI GCAGC 4 cut(s) 548, 560, 713, 1086
BseYI CCCAGC 1 cut(s) 1067
Bsh1236I CGCG 2 cut(s) 348, 1229
BshFI GGCC 4 cut(s) 5, 203, 359, 563
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 4 cut(s) 360, 831, 1178, 1206
BslFI GGGAC 3 cut(s) 637, 812, 1399
BslI CCNNNNNNNGG 3 cut(s) 463, 837, 1198
BsmAI GTCTC 6 cut(s) 377, 453, 633, 916, 970, 974
BsmBI CGTCTC 1 cut(s) 377
BsmFI GGGAC 3 cut(s) 637, 812, 1399
BsmI GAATGC 1 cut(s) 1277
BsnI GGCC 4 cut(s) 5, 203, 359, 563
Bso31I GGTCTC 2 cut(s) 916, 974
BsoBI CYCGRG 1 cut(s) 119
Bsp1286I GDGCHC 3 cut(s) 1032, 1074, 1206
Bsp143I GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
Bsp68I TCGCGA 1 cut(s) 1229
BspACI CCGC 3 cut(s) 363, 939, 1124
BspANI GGCC 4 cut(s) 5, 203, 359, 563
BspCNI CTCAG 3 cut(s) 124, 190, 1362
BspFNI CGCG 2 cut(s) 348, 1229
BspHI TCATGA 1 cut(s) 873
BspLI GGNNCC 2 cut(s) 367, 1203
BspPI GGATC 3 cut(s) 332, 848, 854
BspTI CTTAAG 1 cut(s) 835
BspTNI GGTCTC 2 cut(s) 916, 974
BsrDI GCAATG 1 cut(s) 1069
BsrFI RCCGGY 1 cut(s) 359
BsrI ACTGG 2 cut(s) 376, 494
BssAI RCCGGY 1 cut(s) 359
BssECI CCNNGG 6 cut(s) 120, 409, 813, 829, 1178, 1343
BssMI GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
BssT1I CCWWGG 2 cut(s) 813, 1343
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 6 cut(s) 388, 631, 718, 1249, 1340, 1355
Bst6I CTCTTC 3 cut(s) 171, 1298, 1398
BstAFI CTTAAG 1 cut(s) 835
BstAPI GCANNNNNTGC 1 cut(s) 1050
BstC8I GCNNGC 4 cut(s) 361, 712, 886, 1454
BstDEI CTNAG 5 cut(s) 111, 198, 990, 1370, 1376
BstF5I GGATG 4 cut(s) 80, 681, 1089, 1243
BstFNI CGCG 2 cut(s) 348, 1229
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 6 cut(s) 340, 346, 597, 843, 849, 1321
BstMAI GTCTC 6 cut(s) 377, 453, 633, 916, 970, 974
BstMBI GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
BstMWI GCNNNNNNNGC 6 cut(s) 365, 374, 545, 1050, 1059, 1453
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 1 cut(s) 934
BstSCI CCNGG 4 cut(s) 409, 829, 1177, 1204
BstSFI CTRYAG 1 cut(s) 802
BstUI CGCG 2 cut(s) 348, 1229
BstV1I GCAGC 4 cut(s) 548, 560, 713, 1086
BstV2I GAAGAC 1 cut(s) 1176
BstXI CCANNNNNNTGG 2 cut(s) 820, 949
Bsu36I CCTNAGG 1 cut(s) 198
BsuRI GGCC 4 cut(s) 5, 203, 359, 563
BtrI CACGTC 2 cut(s) 169, 766
BtsCI GGATG 4 cut(s) 80, 681, 1089, 1243
BtsIMutI CAGTG 2 cut(s) 369, 723
BtuMI TCGCGA 1 cut(s) 1229
Cac8I GCNNGC 4 cut(s) 361, 712, 886, 1454
CciI TCATGA 1 cut(s) 873
CfoI GCGC 1 cut(s) 884
Cfr10I RCCGGY 1 cut(s) 359
Cfr13I GGNCC 2 cut(s) 562, 754
DdeI CTNAG 5 cut(s) 111, 198, 990, 1370, 1376
DpnI GATC 6 cut(s) 339, 345, 596, 842, 848, 1320
DpnII GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
DrdI GACNNNNNNGTC 1 cut(s) 824
DseDI GACNNNNNNGTC 1 cut(s) 824
EaeI YGGCCR 1 cut(s) 357
Eam1104I CTCTTC 3 cut(s) 171, 1298, 1398
EarI CTCTTC 3 cut(s) 171, 1298, 1398
EciI GGCGGA 3 cut(s) 378, 928, 1139
Eco130I CCWWGG 2 cut(s) 813, 1343
Eco147I AGGCCT 1 cut(s) 203
Eco24I GRGCYC 3 cut(s) 1032, 1074, 1206
Eco31I GGTCTC 2 cut(s) 916, 974
Eco32I GATATC 1 cut(s) 1428
Eco47I GGWCC 1 cut(s) 754
Eco57I CTGAAG 1 cut(s) 265
Eco81I CCTNAGG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 119
EcoO109I RGGNCCY 1 cut(s) 754
EcoRII CCWGG 1 cut(s) 409
EcoRV GATATC 1 cut(s) 1428
EcoT14I CCWWGG 2 cut(s) 813, 1343
EcoT38I GRGCYC 3 cut(s) 1032, 1074, 1206
ErhI CCWWGG 2 cut(s) 813, 1343
Esp3I CGTCTC 1 cut(s) 377
FaqI GGGAC 3 cut(s) 637, 812, 1399
FbaI TGATCA 1 cut(s) 594
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 4 cut(s) 537, 549, 727, 1100
FokI GGATG 4 cut(s) 87, 668, 1096, 1250
FriOI GRGCYC 3 cut(s) 1032, 1074, 1206
Fsp4HI GCNGC 4 cut(s) 537, 549, 727, 1100
FspBI CTAG 3 cut(s) 425, 651, 1344
GlaI GCGC 1 cut(s) 883
GluI GCNGC 4 cut(s) 537, 549, 727, 1100
GsaI CCCAGC 1 cut(s) 1071
GsuI CTGGAG 3 cut(s) 393, 432, 1019
HaeIII GGCC 4 cut(s) 5, 203, 359, 563
HapII CCGG 4 cut(s) 360, 831, 1178, 1206
HhaI GCGC 1 cut(s) 884
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HinfI GANTC 4 cut(s) 109, 327, 790, 1372
HpaII CCGG 4 cut(s) 360, 831, 1178, 1206
HphI GGTGA 3 cut(s) 95, 1313, 1431
Hpy166II GTNNAC 3 cut(s) 634, 853, 1336
Hpy188I TCNGA 3 cut(s) 114, 135, 284
Hpy188III TCNNGA 9 cut(s) 197, 218, 257, 275, 341, 844, 874, 950, 1228
Hpy8I GTNNAC 3 cut(s) 634, 853, 1336
Hpy99I CGWCG 2 cut(s) 701, 1359
HpyAV CCTTC 6 cut(s) 35, 73, 215, 618, 1198, 1286
HpyCH4III ACNGT 6 cut(s) 388, 631, 718, 1249, 1340, 1355
HpyCH4IV ACGT 3 cut(s) 168, 765, 1170
HpyCH4V TGCA 6 cut(s) 32, 146, 213, 777, 1259, 1316
HpyF10VI GCNNNNNNNGC 6 cut(s) 365, 374, 545, 1050, 1059, 1453
HpyF3I CTNAG 5 cut(s) 111, 198, 990, 1370, 1376
HpySE526I ACGT 3 cut(s) 168, 765, 1170
HspAI GCGC 1 cut(s) 882
KroI GCCGGC 1 cut(s) 359
KroNI GCCGGC 1 cut(s) 361
Ksp22I TGATCA 1 cut(s) 594
Kzo9I GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
LmnI GCTCC 3 cut(s) 365, 374, 1201
Lsp1109I GCAGC 4 cut(s) 548, 560, 713, 1086
LweI GCATC 2 cut(s) 406, 1053
MaeI CTAG 3 cut(s) 425, 651, 1344
MaeII ACGT 3 cut(s) 168, 765, 1170
MaeIII GTNAC 2 cut(s) 526, 745
MalI GATC 6 cut(s) 339, 345, 596, 842, 848, 1320
MboI GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
MboII GAAGA 7 cut(s) 188, 781, 1176, 1315, 1360, 1407, 1415
MhlI GDGCHC 3 cut(s) 1032, 1074, 1206
MluCI AATT 7 cut(s) 332, 486, 517, 662, 734, 772, 959
MlyI GAGTC 3 cut(s) 103, 336, 1381
MmeI TCCRAC 1 cut(s) 993
MroNI GCCGGC 1 cut(s) 359
MseI TTAA 3 cut(s) 186, 836, 1474
MspA1I CMGCKG 1 cut(s) 726
MspCI CTTAAG 1 cut(s) 835
MspI CCGG 4 cut(s) 360, 831, 1178, 1206
MspR9I CCNGG 4 cut(s) 411, 831, 1179, 1206
Mva1269I GAATGC 1 cut(s) 1277
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 2 cut(s) 348, 1229
MwoI GCNNNNNNNGC 6 cut(s) 365, 374, 545, 1050, 1059, 1453
NaeI GCCGGC 1 cut(s) 361
NciI CCSGG 3 cut(s) 831, 1179, 1206
NdeII GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
NgoMIV GCCGGC 1 cut(s) 359
NlaIV GGNNCC 2 cut(s) 367, 1203
NmuCI GTSAC 1 cut(s) 526
NruI TCGCGA 1 cut(s) 1229
NspI RCATGY 1 cut(s) 934
PagI TCATGA 1 cut(s) 873
PceI AGGCCT 1 cut(s) 203
PctI GAATGC 1 cut(s) 1277
PdiI GCCGGC 1 cut(s) 361
PfeI GAWTC 1 cut(s) 790
PflFI GACNNNGTC 1 cut(s) 1371
PkrI GCNGC 4 cut(s) 538, 550, 728, 1101
PleI GAGTC 3 cut(s) 103, 335, 1380
PpsI GAGTC 3 cut(s) 103, 335, 1380
PpuMI RGGWCCY 1 cut(s) 754
Psp1406I AACGTT 1 cut(s) 1170
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 1 cut(s) 409
PspFI CCCAGC 1 cut(s) 1067
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 2 cut(s) 367, 1203
PspPI GGNCC 2 cut(s) 562, 754
PspPPI RGGWCCY 1 cut(s) 754
PsrI GAACNNNNNNTAC 2 cut(s) 47, 79
PsyI GACNNNGTC 1 cut(s) 1371
PvuII CAGCTG 1 cut(s) 726
RruI TCGCGA 1 cut(s) 1229
SaqAI TTAA 3 cut(s) 186, 836, 1474
SatI GCNGC 4 cut(s) 537, 549, 727, 1100
Sau3AI GATC 6 cut(s) 337, 343, 594, 840, 846, 1318
Sau96I GGNCC 2 cut(s) 562, 754
SchI GAGTC 3 cut(s) 103, 336, 1381
ScrFI CCNGG 4 cut(s) 411, 831, 1179, 1206
SduI GDGCHC 3 cut(s) 1032, 1074, 1206
SfaNI GCATC 2 cut(s) 406, 1053
SfcI CTRYAG 1 cut(s) 802
SinI GGWCC 1 cut(s) 754
SmlI CTYRAG 3 cut(s) 835, 977, 1090
SmoI CTYRAG 3 cut(s) 835, 977, 1090
Sse9I AATT 7 cut(s) 332, 486, 517, 662, 734, 772, 959
SseBI AGGCCT 1 cut(s) 203
SsiI CCGC 3 cut(s) 363, 939, 1124
SspMI CTAG 3 cut(s) 425, 651, 1344
StuI AGGCCT 1 cut(s) 203
StyD4I CCNGG 4 cut(s) 409, 829, 1177, 1204
StyI CCWWGG 2 cut(s) 813, 1343
TaaI ACNGT 6 cut(s) 388, 631, 718, 1249, 1340, 1355
TaiI ACGT 3 cut(s) 171, 768, 1173
TaqI TCGA 7 cut(s) 8, 69, 498, 896, 1032, 1119, 1465
TasI AATT 7 cut(s) 332, 486, 517, 662, 734, 772, 959
TfiI GAWTC 1 cut(s) 790
Tru1I TTAA 3 cut(s) 186, 836, 1474
Tru9I TTAA 3 cut(s) 186, 836, 1474
TscAI CASTG 2 cut(s) 376, 723
TseFI GTSAC 1 cut(s) 526
TseI GCWGC 4 cut(s) 536, 548, 726, 1099
Tsp45I GTSAC 1 cut(s) 526
TspDTI ATGAA 7 cut(s) 54, 292, 570, 655, 890, 972, 1416
TspGWI ACGGA 2 cut(s) 1181, 1380
TspRI CASTG 2 cut(s) 376, 723
Tth111I GACNNNGTC 1 cut(s) 1371
Vha464I CTTAAG 1 cut(s) 835
VpaK11BI GGWCC 1 cut(s) 754
XapI RAATTY 4 cut(s) 332, 662, 734, 959
XceI RCATGY 1 cut(s) 934
XmaJI CCTAGG 1 cut(s) 1343
XmiI GTMKAC 1 cut(s) 633
XspI CTAG 3 cut(s) 425, 651, 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.