MD01G1070400.v1.1

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
17470583 .. 17472989
2407 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1070400.v1.1.491

Sequence Viewer

Length: 1686 bp
ATGGACTTTTCCATCAAATTTTGCTTCCCGTGCAGCTTGCCAATCAATCTTCCACTGCCTATAAATCCACAACTGCCTTACCCTTTGCTTCACACTTCATTGCTTAAAAAAATAAGCACTACTGTCGTTCCAGACGTCCAGTGGTATTATCATTCCCTCCAGCTATATAGCTTGTGTGTGTTCTTTGGAACCAAGAAAATGGCCTCATCTGCAAGTGAGAATCGCTTACTGTTATCCAAGATTGCAACCAATGAAAAACATGGGGAGAACTCGCCGTACTTTGACGGATGGAAGGCGTACGATCAAAACCCATTTCACCCAACTGAAAATCCTGAAGGTGTTATCCAGATGGGTCTGGCAGAAAATCAGCTTTCCTTCGACTTGGTTGAAGAGTGGATTAGGAAAAATCCCAAAGCCTCTATTTGCACTGCTGAAGGAATTGAGAAGTTCAGAAACGTGGCAAATTTTCAAGACTACCATGGCTTTCCAGAGTTCAGACAGGCCATTGCTACGTTCATGTCGAAAGCAAGAGGTGGTAGGGTCACATTTGATCCTCATCGCGTAGTTATGAGTGGCGGAGCCACCGGAGCAAACGAGCTGGTCATGTTCTGTTTGGCCGACCCCGGCGATGCTTTCCTTATCCCCTCACCGTACTATCCAGCATTTTACCGAGACCTTGGATGGAGAACTGGAGTCCAAATTGTCCCGGTCGATTGTGATAGCTCCAACAATTTCAAAATAACCAAGGAAGCACTGGAAGCAGCTTATGAAAAAGCCCAAAGCAACAACATCAACGTCAAGGGCTTGATCATAACAAACCCATCAAATCCATTAGGCACAACCCTAGACAAAGACACACTTGAAAGCCTTGTCACATTTATAAACCAAAAGAACATTCACTTGGTTTGTGATGAAATCTATGCAGCCACAGTTTTCAGCTCCCCAAAATTCACATGCATCACCGAGGTCATACAAAACATGAATTGCAACCCCAACCTAATCCACATTGTCTACAGTTTGTCCAAGGACATGGGGTTCCCGGGATTGAGAGTCGGCATCGTTTACTCCTACAACGATGACGTGGTGAACATTGGCCGAAAAATGTCAAGTTTTGGGCTGGTCTCGTCCCAAACTCAGCACATGCTCGCGTCCATGCTTTCGGACGAAGATTTTGTCGAGAAGTTCCTCACCACAAGCGCAAAAAGGCTCGCAAAGAGGCACGGGGTTTTCACTGATGGGCTTGAGGAAGTGGGAATCAACTGCTTGAAGAGCAATGCCGGGCTTTTCTGTTGGATGGACTTAAGGAGGCTATTGAAAGATCAAACGTTTGATGGCGAAATGGTGTTGTGGCGTGTAATCGTTAATGAAGTGAAGCTCAACGTTTCTCCGGGCTCTTCGTTTAAATGTGTCGAGCCTGGTTGGTTTAGGGTTTGCTTCGCCAACATGGATGATGACACAGTGGAAGTTGCACTCAAAAGGATTAGGGCATTTGTAGGGCAAGGAAAGAAAGCTCAAGAACAAGCACAAGTGAAAAGTCCTAAGAAGCGTTGGCAGAGCAATCTAAGGCTGAGCTTTTCATCATCATCCAGAAGGTTTGAGCAGGAAGGTGTTAGTGTTATGTCACCACGTATGATGTCTCCTCATTCACCAATGCCTCACTCACCTCTCCTTCGAGCTACGACTTAA

Protein Analysis

562

Amino Acids

63.06

Weight (kDa)

8.12

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 115 - 494 2.7e-110 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011827)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 881
AatII GACGTC 1 cut(s) 138
AccI GTMKAC 1 cut(s) 1011
AccII CGCG 2 cut(s) 561, 1148
AciI CCGC 1 cut(s) 576
AclI AACGTT 2 cut(s) 1325, 1380
AclWI GGATC 1 cut(s) 545
AcoI YGGCCR 2 cut(s) 615, 1093
AcsI RAATTY 3 cut(s) 17, 463, 947
AcuI CTGAAG 2 cut(s) 354, 453
AcyI GRCGYC 1 cut(s) 135
AfaI GTAC 3 cut(s) 278, 299, 653
AflII CTTAAG 1 cut(s) 1300
AgsI TTSAA 6 cut(s) 389, 470, 736, 863, 1267, 1315
AjiI CACGTC 1 cut(s) 1081
AjnI CCWGG 1 cut(s) 1414
AjuI GAANNNNNNNTTGG 4 cut(s) 879, 884, 911, 916
AloI GAACNNNNNNTCC 2 cut(s) 1019, 1051
Alw26I GTCTC 3 cut(s) 666, 1126, 1641
AlwI GGATC 1 cut(s) 545
Ama87I CYCGRG 1 cut(s) 1039
AoxI GGCC 4 cut(s) 201, 501, 615, 1093
ApeKI GCWGC 3 cut(s) 33, 761, 923
ApoI RAATTY 3 cut(s) 17, 463, 947
ArsI GACNNNNNNTTYG 4 cut(s) 1154, 1158, 1186, 1190
AspLEI GCGC 1 cut(s) 1199
AsuC2I CCSGG 6 cut(s) 624, 707, 1040, 1041, 1279, 1389
AsuHPI GGTGA 8 cut(s) 308, 639, 952, 1096, 1180, 1614, 1638, 1653
AvaI CYCGRG 1 cut(s) 1039
BanII GRGCYC 1 cut(s) 1394
BbvI GCAGC 3 cut(s) 45, 773, 935
BccI CCATC 8 cut(s) 20, 282, 343, 675, 829, 1229, 1288, 1325
BceAI ACGGC 1 cut(s) 259
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 1 cut(s) 1416
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 6 cut(s) 624, 707, 1040, 1041, 1279, 1389
BcoDI GTCTC 3 cut(s) 666, 1126, 1641
BfaI CTAG 1 cut(s) 845
BfmI CTRYAG 1 cut(s) 1012
BfrI CTTAAG 1 cut(s) 1300
BisI GCNGC 3 cut(s) 34, 762, 924
BlpI GCTNAGC 1 cut(s) 1568
BlsI GCNGC 3 cut(s) 35, 763, 925
Bme1390I CCNGG 7 cut(s) 624, 707, 1040, 1041, 1279, 1389, 1416
BmeT110I CYCGRG 1 cut(s) 1039
BmgBI CACGTC 1 cut(s) 1081
BmiI GGNNCC 3 cut(s) 190, 580, 1037
BmrFI CCNGG 7 cut(s) 624, 707, 1040, 1041, 1279, 1389, 1416
BmsI GCATC 3 cut(s) 619, 966, 1065
BpmI CTGGAG 2 cut(s) 143, 711
Bpu1102I GCTNAGC 1 cut(s) 1568
BpuEI CTTGAG 2 cut(s) 1262, 1497
BpuMI CCSGG 6 cut(s) 624, 707, 1040, 1041, 1279, 1389
BsaAI YACGTR 1 cut(s) 1628
BsaBI GATNNNNATC 1 cut(s) 555
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 2 cut(s) 666, 1126
BsaJI CCNNGG 7 cut(s) 478, 622, 676, 744, 963, 1023, 1039
BsaWI WCCGGW 1 cut(s) 584
Bse1I ACTGG 3 cut(s) 139, 694, 759
Bse3DI GCAATG 3 cut(s) 98, 504, 1279
Bse8I GATNNNNATC 1 cut(s) 555
BseBI CCWGG 1 cut(s) 1416
BseDI CCNNGG 7 cut(s) 478, 622, 676, 744, 963, 1023, 1039
BseGI GGATG 5 cut(s) 293, 686, 1299, 1453, 1583
BseJI GATNNNNATC 1 cut(s) 555
BseMI GCAATG 3 cut(s) 98, 504, 1279
BseMII CTCAG 2 cut(s) 1148, 1559
BseNI ACTGG 3 cut(s) 139, 694, 759
BseRI GAGGAG 1 cut(s) 1629
BseXI GCAGC 3 cut(s) 45, 773, 935
BsgI GTGCAG 1 cut(s) 52
Bsh1236I CGCG 2 cut(s) 561, 1148
Bsh1285I CGRYCG 1 cut(s) 711
BshFI GGCC 4 cut(s) 203, 503, 617, 1095
BsiEI CGRYCG 1 cut(s) 711
BsiHKCI CYCGRG 1 cut(s) 1039
BsiSI CCGG 6 cut(s) 585, 624, 707, 1040, 1278, 1388
BsiWI CGTACG 1 cut(s) 297
BslFI GGGAC 2 cut(s) 689, 1111
BsmAI GTCTC 3 cut(s) 666, 1126, 1641
BsmFI GGGAC 2 cut(s) 689, 1111
BsnI GGCC 4 cut(s) 203, 503, 617, 1095
Bso31I GGTCTC 2 cut(s) 666, 1126
BsoBI CYCGRG 1 cut(s) 1039
Bsp1286I GDGCHC 1 cut(s) 1394
Bsp143I GATC 4 cut(s) 301, 550, 807, 1318
Bsp1720I GCTNAGC 1 cut(s) 1568
Bsp19I CCATGG 1 cut(s) 478
BspACI CCGC 1 cut(s) 576
BspANI GGCC 4 cut(s) 203, 503, 617, 1095
BspCNI CTCAG 2 cut(s) 1147, 1560
BspFNI CGCG 2 cut(s) 561, 1148
BspLI GGNNCC 3 cut(s) 190, 580, 1037
BspPI GGATC 1 cut(s) 545
BspQI GCTCTTC 2 cut(s) 1262, 1399
BspTI CTTAAG 1 cut(s) 1300
BspTNI GGTCTC 2 cut(s) 666, 1126
BsrDI GCAATG 3 cut(s) 98, 504, 1279
BsrI ACTGG 3 cut(s) 139, 694, 759
BssECI CCNNGG 7 cut(s) 478, 622, 676, 744, 963, 1023, 1039
BssMI GATC 4 cut(s) 301, 550, 807, 1318
BssNI GRCGYC 1 cut(s) 135
BssT1I CCWWGG 4 cut(s) 478, 676, 744, 1023
Bst2UI CCWGG 1 cut(s) 1416
Bst4CI ACNGT 6 cut(s) 124, 231, 651, 931, 1016, 1459
Bst6I CTCTTC 3 cut(s) 384, 1262, 1399
BstACI GRCGYC 1 cut(s) 135
BstAFI CTTAAG 1 cut(s) 1300
BstBAI YACGTR 1 cut(s) 1628
BstC8I GCNNGC 3 cut(s) 38, 1146, 1209
BstDEI CTNAG 4 cut(s) 1134, 1539, 1562, 1568
BstDSI CCRYGG 1 cut(s) 478
BstF5I GGATG 5 cut(s) 293, 686, 1299, 1453, 1583
BstFNI CGCG 2 cut(s) 561, 1148
BstHHI GCGC 1 cut(s) 1199
BstKTI GATC 4 cut(s) 304, 553, 810, 1321
BstMAI GTCTC 3 cut(s) 666, 1126, 1641
BstMBI GATC 4 cut(s) 301, 550, 807, 1318
BstMCI CGRYCG 1 cut(s) 711
BstMWI GCNNNNNNNGC 5 cut(s) 30, 209, 587, 758, 1269
BstNI CCWGG 1 cut(s) 1416
BstNSI RCATGY 2 cut(s) 957, 1144
BstSCI CCNGG 7 cut(s) 622, 705, 1038, 1039, 1277, 1387, 1414
BstSFI CTRYAG 1 cut(s) 1012
BstUI CGCG 2 cut(s) 561, 1148
BstV1I GCAGC 3 cut(s) 45, 773, 935
BstXI CCANNNNNNTGG 2 cut(s) 199, 1030
BsuRI GGCC 4 cut(s) 203, 503, 617, 1095
BtgI CCRYGG 1 cut(s) 478
BtgZI GCGATG 2 cut(s) 542, 642
BtrI CACGTC 1 cut(s) 1081
BtsCI GGATG 5 cut(s) 293, 686, 1299, 1453, 1583
BtsI GCAGTG 2 cut(s) 53, 426
BtsIMutI CAGTG 6 cut(s) 53, 146, 426, 752, 1230, 1464
Cac8I GCNNGC 3 cut(s) 38, 1146, 1209
CfoI GCGC 1 cut(s) 1199
Cfr9I CCCGGG 1 cut(s) 1039
CseI GACGC 1 cut(s) 1137
Csp6I GTAC 3 cut(s) 277, 298, 652
CviQI GTAC 3 cut(s) 277, 298, 652
DdeI CTNAG 4 cut(s) 1134, 1539, 1562, 1568
DpnI GATC 4 cut(s) 303, 552, 809, 1320
DpnII GATC 4 cut(s) 301, 550, 807, 1318
DraI TTTAAA 1 cut(s) 1402
EaeI YGGCCR 2 cut(s) 615, 1093
Eam1104I CTCTTC 3 cut(s) 384, 1262, 1399
EarI CTCTTC 3 cut(s) 384, 1262, 1399
EciI GGCGGA 1 cut(s) 591
Eco130I CCWWGG 4 cut(s) 478, 676, 744, 1023
Eco24I GRGCYC 1 cut(s) 1394
Eco31I GGTCTC 2 cut(s) 666, 1126
Eco57I CTGAAG 2 cut(s) 354, 453
Eco88I CYCGRG 1 cut(s) 1039
EcoRII CCWGG 1 cut(s) 1414
EcoT14I CCWWGG 4 cut(s) 478, 676, 744, 1023
EcoT22I ATGCAT 1 cut(s) 959
EcoT38I GRGCYC 1 cut(s) 1394
ErhI CCWWGG 4 cut(s) 478, 676, 744, 1023
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 2 cut(s) 689, 1111
FbaI TGATCA 1 cut(s) 807
FblI GTMKAC 1 cut(s) 1011
Fnu4HI GCNGC 3 cut(s) 34, 762, 924
FokI GGATG 5 cut(s) 300, 693, 1306, 1460, 1570
FriOI GRGCYC 1 cut(s) 1394
Fsp4HI GCNGC 3 cut(s) 34, 762, 924
FspBI CTAG 1 cut(s) 845
GlaI GCGC 1 cut(s) 1198
GluI GCNGC 3 cut(s) 34, 762, 924
GsuI CTGGAG 2 cut(s) 143, 711
HaeIII GGCC 4 cut(s) 203, 503, 617, 1095
HapII CCGG 6 cut(s) 585, 624, 707, 1040, 1278, 1388
HgaI GACGC 1 cut(s) 1137
HhaI GCGC 1 cut(s) 1199
Hin1I GRCGYC 1 cut(s) 135
Hin6I GCGC 1 cut(s) 1197
HinP1I GCGC 1 cut(s) 1197
HinfI GANTC 4 cut(s) 220, 693, 1050, 1254
HpaII CCGG 6 cut(s) 585, 624, 707, 1040, 1278, 1388
HphI GGTGA 8 cut(s) 308, 639, 952, 1096, 1180, 1614, 1638, 1653
Hpy166II GTNNAC 3 cut(s) 1012, 1063, 1087
Hpy188I TCNGA 3 cut(s) 452, 497, 1162
Hpy188III TCNNGA 8 cut(s) 131, 332, 346, 470, 488, 1177, 1514, 1587
Hpy8I GTNNAC 3 cut(s) 1012, 1063, 1087
HpyAV CCTTC 7 cut(s) 286, 329, 385, 428, 1584, 1598, 1679
HpyCH4III ACNGT 6 cut(s) 124, 231, 651, 931, 1016, 1459
HpyCH4IV ACGT 8 cut(s) 135, 456, 512, 795, 1080, 1325, 1380, 1627
HpyCH4V TGCA 8 cut(s) 33, 212, 245, 426, 923, 957, 987, 1469
HpyF10VI GCNNNNNNNGC 5 cut(s) 30, 209, 587, 758, 1269
HpyF3I CTNAG 4 cut(s) 1134, 1539, 1562, 1568
HpySE526I ACGT 8 cut(s) 135, 456, 512, 795, 1080, 1325, 1380, 1627
Hsp92I GRCGYC 1 cut(s) 135
HspAI GCGC 1 cut(s) 1197
Ksp22I TGATCA 1 cut(s) 807
Kzo9I GATC 4 cut(s) 301, 550, 807, 1318
LguI GCTCTTC 2 cut(s) 1262, 1399
LmnI GCTCC 4 cut(s) 578, 587, 728, 944
Lsp1109I GCAGC 3 cut(s) 45, 773, 935
LweI GCATC 3 cut(s) 619, 966, 1065
MaeI CTAG 1 cut(s) 845
MaeII ACGT 8 cut(s) 135, 456, 512, 795, 1080, 1325, 1380, 1627
MaeIII GTNAC 3 cut(s) 541, 871, 1620
MalI GATC 4 cut(s) 303, 552, 809, 1320
MboI GATC 4 cut(s) 301, 550, 807, 1318
MboII GAAGA 5 cut(s) 41, 401, 1178, 1279, 1386
MhlI GDGCHC 1 cut(s) 1394
MluCI AATT 7 cut(s) 17, 438, 463, 699, 730, 947, 982
MlyI GAGTC 2 cut(s) 702, 1059
MmeI TCCRAC 2 cut(s) 750, 1271
Mph1103I ATGCAT 1 cut(s) 959
MseI TTAA 5 cut(s) 105, 1301, 1362, 1401, 1684
MspCI CTTAAG 1 cut(s) 1300
MspI CCGG 6 cut(s) 585, 624, 707, 1040, 1278, 1388
MspR9I CCNGG 7 cut(s) 624, 707, 1040, 1041, 1279, 1389, 1416
MvaI CCWGG 1 cut(s) 1416
MvnI CGCG 2 cut(s) 561, 1148
MwoI GCNNNNNNNGC 5 cut(s) 30, 209, 587, 758, 1269
NciI CCSGG 6 cut(s) 624, 707, 1040, 1041, 1279, 1389
NcoI CCATGG 1 cut(s) 478
NdeII GATC 4 cut(s) 301, 550, 807, 1318
NlaIV GGNNCC 3 cut(s) 190, 580, 1037
NmuCI GTSAC 3 cut(s) 541, 871, 1620
NsiI ATGCAT 1 cut(s) 959
NspI RCATGY 2 cut(s) 957, 1144
PciSI GCTCTTC 2 cut(s) 1262, 1399
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 518
PfeI GAWTC 2 cut(s) 220, 1254
Pfl23II CGTACG 1 cut(s) 297
PkrI GCNGC 3 cut(s) 35, 763, 925
PleI GAGTC 2 cut(s) 701, 1058
PpsI GAGTC 2 cut(s) 701, 1058
Ppu21I YACGTR 1 cut(s) 1628
PsiI TTATAA 1 cut(s) 881
Psp1406I AACGTT 2 cut(s) 1325, 1380
Psp6I CCWGG 1 cut(s) 1414
PspGI CCWGG 1 cut(s) 1414
PspLI CGTACG 1 cut(s) 297
PspN4I GGNNCC 3 cut(s) 190, 580, 1037
PsrI GAACNNNNNNTAC 2 cut(s) 260, 292
RsaI GTAC 3 cut(s) 278, 299, 653
RsaNI GTAC 3 cut(s) 277, 298, 652
SapI GCTCTTC 2 cut(s) 1262, 1399
SaqAI TTAA 5 cut(s) 105, 1301, 1362, 1401, 1684
SatI GCNGC 3 cut(s) 34, 762, 924
Sau3AI GATC 4 cut(s) 301, 550, 807, 1318
SchI GAGTC 2 cut(s) 702, 1059
ScrFI CCNGG 7 cut(s) 624, 707, 1040, 1041, 1279, 1389, 1416
SduI GDGCHC 1 cut(s) 1394
SfaNI GCATC 3 cut(s) 619, 966, 1065
SfcI CTRYAG 1 cut(s) 1012
SmaI CCCGGG 1 cut(s) 1041
SmlI CTYRAG 3 cut(s) 1241, 1300, 1512
SmoI CTYRAG 3 cut(s) 1241, 1300, 1512
Sse9I AATT 7 cut(s) 17, 438, 463, 699, 730, 947, 982
SsiI CCGC 1 cut(s) 576
SspMI CTAG 1 cut(s) 845
StyD4I CCNGG 7 cut(s) 622, 705, 1038, 1039, 1277, 1387, 1414
StyI CCWWGG 4 cut(s) 478, 676, 744, 1023
TaaI ACNGT 6 cut(s) 124, 231, 651, 931, 1016, 1459
TaiI ACGT 8 cut(s) 138, 459, 515, 798, 1083, 1328, 1383, 1630
TaqI TCGA 6 cut(s) 378, 521, 711, 1176, 1410, 1672
TasI AATT 7 cut(s) 17, 438, 463, 699, 730, 947, 982
TfiI GAWTC 2 cut(s) 220, 1254
Tru1I TTAA 5 cut(s) 105, 1301, 1362, 1401, 1684
Tru9I TTAA 5 cut(s) 105, 1301, 1362, 1401, 1684
TscAI CASTG 6 cut(s) 60, 146, 433, 759, 1237, 1464
TseFI GTSAC 3 cut(s) 541, 871, 1620
TseI GCWGC 3 cut(s) 33, 761, 923
Tsp45I GTSAC 3 cut(s) 541, 871, 1620
TspDTI ATGAA 8 cut(s) 87, 267, 505, 783, 927, 995, 1380, 1566
TspGWI ACGGA 1 cut(s) 300
TspMI CCCGGG 1 cut(s) 1039
TspRI CASTG 6 cut(s) 60, 146, 433, 759, 1237, 1464
Vha464I CTTAAG 1 cut(s) 1300
XapI RAATTY 3 cut(s) 17, 463, 947
XceI RCATGY 2 cut(s) 957, 1144
XcmI CCANNNNNNNNNTGG 2 cut(s) 138, 751
XmaI CCCGGG 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 1011
XspI CTAG 1 cut(s) 845
ZraI GACGTC 1 cut(s) 136
Zsp2I ATGCAT 1 cut(s) 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.