AT1G02460

Glycosyl hydrolases family 28

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012763
Physical Location & Seq
Reverse (-)
504463 .. 507268
2806 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02460.1

Sequence Viewer

Length: 1476 bp
ATGTTAACTTCTACTTATAATCGCAACCAAGTCCTCGGTTTCATGACACTTATTCTCACATTAATGTCTCTAAGCGAAGCTCGAAACCATCACCACAAAGAGAAACACAAACATAATAACCATAACCACCACTCCTCTAAACCAAAGCCACCATCTTCCTCCATCTCTCAGCCTCCTACTCCTCCTCCGGGTCCCCCTGACTCACCGGCACCGTCACTGCCACCCTCACCTTCTGACGATCCTGCAGATGACAACAACGGAATCTACAACGTTAGAAAGTATGGTGCGGTGGGAGACGGTGAAACCGACGACACTGAAGCATTCAAAACGGCGTGGGACTCATCTTGTAACAACGAGAACAACACCGATTCAGTGTTGCTTGTTCCTTACGGCTATACATTCATGATTCAATCAACCATTTTCACTGGTCCTTGCCGCTCCTACCAATTTTTCCAAGTGGATGGGACCATTGTAACACCCGATGGACCAGAGTCGTGGCCGAGCAATATAAGTAAGAGACAATGGCTTGTGTTCTATAGAGTCAACGGAATGGCTTTGAAAGGCGAAGGAGTTATCGACGGCAGGGGACAAAAGTGGTGGGATCTTCCCTGTAAACCTCACCGGAGTGTCAACAAATCAGCAATTGTTACCGGTCCTTGCGATAGCCCCATTGCTTTGAGGTTCTTTATGAGCTCGAATCTAAGGGTGGAAGGTCTACAGATAAAAAACAGCCCGCAGTTTCATTTCAGATTCGACGGATGTCAAGGAGTTCACGTTGAGTCCCTTCACATCACTGCTCCACCGTTAAGTCCCAACACCGATGGGATCCACATCGAAAACTCTAACTCCGTTACCATCTACAATTCCATTATCTCCAATGGAGATGATTGTGTATCGATTGGCTCCGGATCATACGACGTTGATATACGGAATCTAACTTGTGGACCCGGTGGCCATGGAATTAGTATCGGAAGTTTGGGCAATCACAACTCACGAGCATGTGTCTCAAATATAACGGTTAGAGATTCGGTCATAAAATACTCTGACAATGGAGTTAGGATCAAAACATGGCAAGGTGGGTCCGGTTCGGTCTCAGGCGTGACATTCAACAACATCCACGTGGACTCAGTCCGTAACCCGATAATTATTGACCAATACTATTGTATGACCAAAGATTGTGCTAACAAAACATCAGCGGTTTTTGTGTCTGATATTGCATACCAAGGCATCAAAGGAACTTACGATATTCGAAGTCCCCCGATGCATTTTGGATGCAGCGATGCAGTACCATGCACAAATCTAACTCTTTCCGACATCGAATTGCTTCCTGCCAAAGGCGAAATCGTTTTGGATCCGTTTTGTTGGAATGCTTATGGAATTGCGGAAGAGCTTTCGATTCCTCCGGTTTGGTGTCTCATGTCCGATCCTCCCAAGGGGTTGCAAGGATCTCTTGTTGACAAGTGTGGTTCATCGTGA

Protein Analysis

491

Amino Acids

53.46

Weight (kDa)

6.0

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 89 - 140 4e-08 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 122 - 441 7.1e-87 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012763)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02460
fragaria_vesca FvH4_1g26650
malus_domestica MD09G1287300.v1.1 MD17G1279500.v1.1
prunus_persica Prupe.3G005900_v2.0.a1 Prupe.6G307200_v2.0.a1
pyrus_communis pycom09g19460 pycom17g27760
rosa_chinensis RchiOBHm_Chr3g0486841
rosa_laevigata RLG00000023055
rosa_multiflora Rmu_sc0005709.1_g000005
rosa_roxburghii Rroxscaffold_6G00395520
rosa_rugosa Rorug03G0227400.1
rosa_samantha Rh3AG277500 Rh3BG312600 Rh3CG311500 Rh3DG308100
rosa_wichuraiana Rw3G024640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 18
AccB1I GGYRCC 1 cut(s) 208
AccBSI CCGCTC 1 cut(s) 438
AccI GTMKAC 1 cut(s) 715
AccIII TCCGGA 1 cut(s) 905
AciI CCGC 5 cut(s) 287, 436, 734, 1196, 1382
AclI AACGTT 1 cut(s) 270
AcoI YGGCCR 2 cut(s) 497, 952
AcuI CTGAAG 1 cut(s) 336
AcvI CACGTG 1 cut(s) 1120
AfaI GTAC 1 cut(s) 1287
AfiI CCNNNNNNNGG 3 cut(s) 188, 1334, 1433
AgeI ACCGGT 1 cut(s) 650
AgsI TTSAA 4 cut(s) 325, 410, 559, 1108
AleI CACNNNNGTG 1 cut(s) 624
AluBI AGCT 3 cut(s) 80, 693, 1390
AluI AGCT 3 cut(s) 80, 693, 1390
Alw21I GWGCWC 1 cut(s) 695
Alw26I GTCTC 6 cut(s) 72, 288, 511, 1009, 1096, 1418
Aor13HI TCCGGA 1 cut(s) 905
AoxI GGCC 2 cut(s) 497, 952
ApeKI GCWGC 1 cut(s) 1275
AseI ATTAAT 1 cut(s) 62
AsiGI ACCGGT 1 cut(s) 650
Asp700I GAANNNNTTC 1 cut(s) 1323
AspS9I GGNCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
AsuC2I CCSGG 2 cut(s) 189, 948
AsuHPI GGTGA 5 cut(s) 83, 195, 219, 311, 611
AsuII TTCGAA 1 cut(s) 1249
AvaII GGWCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
BalI TGGCCA 1 cut(s) 954
BamHI GGATCC 2 cut(s) 825, 1351
BanI GGYRCC 1 cut(s) 208
BanII GRGCYC 1 cut(s) 695
BauI CACGAG 1 cut(s) 993
BbrPI CACGTG 1 cut(s) 1120
Bbv12I GWGCWC 1 cut(s) 695
BbvI GCAGC 1 cut(s) 1287
BccI CCATC 7 cut(s) 96, 160, 170, 455, 476, 815, 863
BceAI ACGGC 3 cut(s) 345, 406, 595
BcnI CCSGG 2 cut(s) 189, 948
BcoDI GTCTC 6 cut(s) 72, 288, 511, 1009, 1096, 1418
BfmI CTRYAG 3 cut(s) 243, 535, 716
BisI GCNGC 2 cut(s) 436, 1276
BlsI GCNGC 2 cut(s) 437, 1277
Bme1390I CCNGG 2 cut(s) 189, 948
Bme18I GGWCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
BmgT120I GGNCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
BmiI GGNNCC 9 cut(s) 192, 193, 210, 466, 827, 904, 946, 1081, 1353
BmrFI CCNGG 2 cut(s) 189, 948
BmsI GCATC 4 cut(s) 1236, 1251, 1262, 1270
BoxI GACNNNNGTC 2 cut(s) 490, 759
Bpu14I TTCGAA 1 cut(s) 1249
BpuMI CCSGG 2 cut(s) 189, 948
Bsa29I ATCGAT 1 cut(s) 896
BsaAI YACGTR 1 cut(s) 1120
BsaBI GATNNNNATC 1 cut(s) 830
BsaI GGTCTC 1 cut(s) 1096
BsaJI CCNNGG 4 cut(s) 34, 955, 1222, 1431
BsaWI WCCGGW 5 cut(s) 621, 650, 905, 1082, 1402
BsaXI ACNNNNNCTCC 8 cut(s) 116, 146, 169, 199, 759, 789, 830, 860
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 1334, 1433
Bse118I RCCGGY 2 cut(s) 205, 650
Bse1I ACTGG 1 cut(s) 430
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 1 cut(s) 830
BseAI TCCGGA 1 cut(s) 905
BseCI ATCGAT 1 cut(s) 896
BseDI CCNNGG 4 cut(s) 34, 955, 1222, 1431
BseGI GGATG 4 cut(s) 466, 764, 1113, 1277
BseJI GATNNNNATC 1 cut(s) 830
BseLI CCNNNNNNNGG 3 cut(s) 188, 1334, 1433
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 3 cut(s) 182, 1107, 1140
BseNI ACTGG 1 cut(s) 430
BseRI GAGGAG 3 cut(s) 124, 171, 174
BseXI GCAGC 1 cut(s) 1287
BshFI GGCC 2 cut(s) 499, 954
BshNI GGYRCC 1 cut(s) 208
BshTI ACCGGT 1 cut(s) 650
BshVI ATCGAT 1 cut(s) 896
BsiHKAI GWGCWC 1 cut(s) 695
BsiSI CCGG 8 cut(s) 188, 206, 622, 651, 906, 948, 1083, 1403
BslFI GGGAC 7 cut(s) 177, 350, 478, 600, 766, 795, 1239
BslI CCNNNNNNNGG 3 cut(s) 188, 1334, 1433
BsmAI GTCTC 6 cut(s) 72, 288, 511, 1009, 1096, 1418
BsmBI CGTCTC 1 cut(s) 288
BsmFI GGGAC 7 cut(s) 177, 350, 478, 600, 766, 795, 1239
BsmI GAATGC 2 cut(s) 320, 1372
BsnI GGCC 2 cut(s) 499, 954
Bso31I GGTCTC 1 cut(s) 1096
Bsp119I TTCGAA 1 cut(s) 1249
Bsp1286I GDGCHC 1 cut(s) 695
Bsp13I TCCGGA 1 cut(s) 905
Bsp143I GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
Bsp19I CCATGG 1 cut(s) 955
BspACI CCGC 5 cut(s) 287, 436, 734, 1196, 1382
BspANI GGCC 2 cut(s) 499, 954
BspCNI CTCAG 3 cut(s) 181, 1106, 1139
BspDI ATCGAT 1 cut(s) 896
BspEI TCCGGA 1 cut(s) 905
BspHI TCATGA 2 cut(s) 42, 402
BspLI GGNNCC 9 cut(s) 192, 193, 210, 466, 827, 904, 946, 1081, 1353
BspMAI CTGCAG 1 cut(s) 247
BspQI GCTCTTC 1 cut(s) 1380
BspT104I TTCGAA 1 cut(s) 1249
BspT107I GGYRCC 1 cut(s) 208
BspTNI GGTCTC 1 cut(s) 1096
BsrBI CCGCTC 1 cut(s) 438
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 2 cut(s) 205, 650
BsrI ACTGG 1 cut(s) 430
BssAI RCCGGY 2 cut(s) 205, 650
BssECI CCNNGG 4 cut(s) 34, 955, 1222, 1431
BssMI GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
BssSI CACGAG 1 cut(s) 993
BssT1I CCWWGG 3 cut(s) 955, 1222, 1431
Bst2BI CACGAG 1 cut(s) 993
Bst4CI ACNGT 4 cut(s) 213, 299, 804, 1018
Bst6I CTCTTC 1 cut(s) 1380
BstBAI YACGTR 1 cut(s) 1120
BstBI TTCGAA 1 cut(s) 1249
BstC8I GCNNGC 1 cut(s) 734
BstDEI CTNAG 5 cut(s) 71, 168, 701, 1093, 1126
BstDSI CCRYGG 1 cut(s) 955
BstENI CCTNNNNNAGG 1 cut(s) 1332
BstF5I GGATG 4 cut(s) 466, 764, 1113, 1277
BstKTI GATC 8 cut(s) 241, 604, 828, 911, 1062, 1354, 1426, 1448
BstMAI GTCTC 6 cut(s) 72, 288, 511, 1009, 1096, 1418
BstMBI GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
BstNSI RCATGY 1 cut(s) 1002
BstPAI GACNNNNGTC 2 cut(s) 490, 759
BstSCI CCNGG 2 cut(s) 187, 946
BstSFI CTRYAG 3 cut(s) 243, 535, 716
BstV1I GCAGC 1 cut(s) 1287
BstX2I RGATCY 4 cut(s) 601, 825, 1351, 1445
BstXI CCANNNNNNTGG 2 cut(s) 461, 495
BstYI RGATCY 4 cut(s) 601, 825, 1351, 1445
Bsu15I ATCGAT 1 cut(s) 896
BsuRI GGCC 2 cut(s) 499, 954
BsuTUI ATCGAT 1 cut(s) 896
BtgI CCRYGG 1 cut(s) 955
BtgZI GCGATG 1 cut(s) 1293
BtsCI GGATG 4 cut(s) 466, 764, 1113, 1277
BtsI GCAGTG 2 cut(s) 215, 792
BtsIMutI CAGTG 5 cut(s) 215, 312, 378, 423, 792
Cac8I GCNNGC 1 cut(s) 734
CciI TCATGA 2 cut(s) 42, 402
Cfr10I RCCGGY 2 cut(s) 205, 650
Cfr13I GGNCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
ClaI ATCGAT 1 cut(s) 896
Csp6I GTAC 1 cut(s) 1286
CspAI ACCGGT 1 cut(s) 650
CspCI CAANNNNNGTGG 2 cut(s) 578, 613
CviAII CATG 7 cut(s) 43, 403, 956, 999, 1068, 1290, 1417
CviQI GTAC 1 cut(s) 1286
DdeI CTNAG 5 cut(s) 71, 168, 701, 1093, 1126
DpnI GATC 8 cut(s) 240, 603, 827, 910, 1061, 1353, 1425, 1447
DpnII GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
EaeI YGGCCR 2 cut(s) 497, 952
Eam1104I CTCTTC 1 cut(s) 1380
EarI CTCTTC 1 cut(s) 1380
Ecl136II GAGCTC 1 cut(s) 693
Eco130I CCWWGG 3 cut(s) 955, 1222, 1431
Eco24I GRGCYC 1 cut(s) 695
Eco31I GGTCTC 1 cut(s) 1096
Eco47I GGWCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
Eco53kI GAGCTC 1 cut(s) 693
Eco57I CTGAAG 1 cut(s) 336
Eco72I CACGTG 1 cut(s) 1120
EcoICRI GAGCTC 1 cut(s) 693
EcoNI CCTNNNNNAGG 1 cut(s) 1332
EcoO109I RGGNCCY 1 cut(s) 191
EcoT14I CCWWGG 3 cut(s) 955, 1222, 1431
EcoT22I ATGCAT 1 cut(s) 1266
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 3 cut(s) 955, 1222, 1431
Esp3I CGTCTC 1 cut(s) 288
FaeI CATG 7 cut(s) 46, 406, 959, 1002, 1071, 1293, 1420
FalI AAGNNNNNCTT 2 cut(s) 1434, 1466
FaqI GGGAC 7 cut(s) 177, 350, 478, 600, 766, 795, 1239
FatI CATG 7 cut(s) 42, 402, 955, 998, 1067, 1289, 1416
FauI CCCGC 1 cut(s) 741
FblI GTMKAC 1 cut(s) 715
Fnu4HI GCNGC 2 cut(s) 436, 1276
FokI GGATG 4 cut(s) 473, 771, 1100, 1284
FriOI GRGCYC 1 cut(s) 695
Fsp4HI GCNGC 2 cut(s) 436, 1276
GluI GCNGC 2 cut(s) 436, 1276
HaeIII GGCC 2 cut(s) 499, 954
HapII CCGG 8 cut(s) 188, 206, 622, 651, 906, 948, 1083, 1403
Hin1II CATG 7 cut(s) 46, 406, 959, 1002, 1071, 1293, 1420
HincII GTYRAC 4 cut(s) 6, 544, 631, 1456
HindII GTYRAC 4 cut(s) 6, 544, 631, 1456
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 8 cut(s) 188, 206, 622, 651, 906, 948, 1083, 1403
HphI GGTGA 5 cut(s) 83, 195, 219, 311, 611
Hpy166II GTNNAC 9 cut(s) 6, 544, 614, 631, 716, 772, 944, 1123, 1456
Hpy188I TCNGA 7 cut(s) 235, 749, 971, 1045, 1210, 1312, 1423
Hpy188III TCNNGA 5 cut(s) 43, 403, 906, 993, 1473
Hpy8I GTNNAC 9 cut(s) 6, 544, 614, 631, 716, 772, 944, 1123, 1456
Hpy99I CGWCG 4 cut(s) 311, 581, 758, 920
HpyAV CCTTC 4 cut(s) 240, 560, 704, 794
HpyCH4III ACNGT 4 cut(s) 213, 299, 804, 1018
HpyCH4IV ACGT 4 cut(s) 270, 774, 918, 1119
HpyCH4V TGCA 7 cut(s) 245, 1217, 1264, 1275, 1283, 1293, 1441
HpyF3I CTNAG 5 cut(s) 71, 168, 701, 1093, 1126
HpySE526I ACGT 4 cut(s) 270, 774, 918, 1119
Hsp92II CATG 7 cut(s) 46, 406, 959, 1002, 1071, 1293, 1420
KflI GGGWCCC 1 cut(s) 191
Kpn2I TCCGGA 1 cut(s) 905
KspAI GTTAAC 1 cut(s) 6
Kzo9I GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
LguI GCTCTTC 1 cut(s) 1380
LmnI GCTCC 3 cut(s) 443, 802, 908
Lsp1109I GCAGC 1 cut(s) 1287
LweI GCATC 4 cut(s) 1236, 1251, 1262, 1270
MaeII ACGT 4 cut(s) 270, 774, 918, 1119
MaeIII GTNAC 7 cut(s) 213, 347, 472, 646, 850, 1099, 1133
MalI GATC 8 cut(s) 240, 603, 827, 910, 1061, 1353, 1425, 1447
MbiI CCGCTC 1 cut(s) 438
MboI GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
MboII GAAGA 3 cut(s) 147, 596, 1397
MfeI CAATTG 1 cut(s) 642
MflI RGATCY 4 cut(s) 601, 825, 1351, 1445
MhlI GDGCHC 1 cut(s) 695
MlsI TGGCCA 1 cut(s) 954
MluCI AATT 7 cut(s) 446, 642, 862, 960, 1143, 1319, 1377
MluNI TGGCCA 1 cut(s) 954
MlyI GAGTC 6 cut(s) 194, 332, 500, 549, 788, 1118
MmeI TCCRAC 2 cut(s) 1335, 1343
Mox20I TGGCCA 1 cut(s) 954
Mph1103I ATGCAT 1 cut(s) 1266
MroI TCCGGA 1 cut(s) 905
MroXI GAANNNNTTC 1 cut(s) 1323
MscI TGGCCA 1 cut(s) 954
MseI TTAA 3 cut(s) 5, 62, 806
MslI CAYNNNNRTG 4 cut(s) 62, 624, 997, 1118
Msp20I TGGCCA 1 cut(s) 954
MspA1I CMGCKG 1 cut(s) 1196
MspI CCGG 8 cut(s) 188, 206, 622, 651, 906, 948, 1083, 1403
MspR9I CCNGG 2 cut(s) 189, 948
MunI CAATTG 1 cut(s) 642
Mva1269I GAATGC 2 cut(s) 320, 1372
NciI CCSGG 2 cut(s) 189, 948
NcoI CCATGG 1 cut(s) 955
NdeII GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
NlaIII CATG 7 cut(s) 46, 406, 959, 1002, 1071, 1293, 1420
NlaIV GGNNCC 9 cut(s) 192, 193, 210, 466, 827, 904, 946, 1081, 1353
NmeAIII GCCGAG 1 cut(s) 525
NmuCI GTSAC 2 cut(s) 213, 1099
NsiI ATGCAT 1 cut(s) 1266
NspI RCATGY 1 cut(s) 1002
NspV TTCGAA 1 cut(s) 1249
OliI CACNNNNGTG 1 cut(s) 624
PagI TCATGA 2 cut(s) 42, 402
PciSI GCTCTTC 1 cut(s) 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PctI GAATGC 2 cut(s) 320, 1372
PdmI GAANNNNTTC 1 cut(s) 1323
PfeI GAWTC 8 cut(s) 261, 368, 406, 697, 750, 931, 1025, 1396
PflFI GACNNNGTC 1 cut(s) 1127
PinAI ACCGGT 1 cut(s) 650
PkrI GCNGC 2 cut(s) 437, 1277
PleI GAGTC 6 cut(s) 194, 332, 499, 548, 787, 1118
PmaCI CACGTG 1 cut(s) 1120
PmlI CACGTG 1 cut(s) 1120
PpsI GAGTC 6 cut(s) 194, 332, 499, 548, 787, 1118
Ppu21I YACGTR 1 cut(s) 1120
PpuMI RGGWCCY 1 cut(s) 191
PshAI GACNNNNGTC 2 cut(s) 490, 759
PshBI ATTAAT 1 cut(s) 62
PsiI TTATAA 1 cut(s) 18
Psp124BI GAGCTC 1 cut(s) 695
Psp1406I AACGTT 1 cut(s) 270
Psp5II RGGWCCY 1 cut(s) 191
PspCI CACGTG 1 cut(s) 1120
PspN4I GGNNCC 9 cut(s) 192, 193, 210, 466, 827, 904, 946, 1081, 1353
PspPI GGNCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
PspPPI RGGWCCY 1 cut(s) 191
PstI CTGCAG 1 cut(s) 247
PsuI RGATCY 4 cut(s) 601, 825, 1351, 1445
PsyI GACNNNGTC 1 cut(s) 1127
RsaI GTAC 1 cut(s) 1287
RsaNI GTAC 1 cut(s) 1286
RseI CAYNNNNRTG 4 cut(s) 62, 624, 997, 1118
SacI GAGCTC 1 cut(s) 695
SapI GCTCTTC 1 cut(s) 1380
SaqAI TTAA 3 cut(s) 5, 62, 806
SatI GCNGC 2 cut(s) 436, 1276
Sau3AI GATC 8 cut(s) 238, 601, 825, 908, 1059, 1351, 1423, 1445
Sau96I GGNCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
SchI GAGTC 6 cut(s) 194, 332, 500, 549, 788, 1118
ScrFI CCNGG 2 cut(s) 189, 948
SduI GDGCHC 1 cut(s) 695
SfaNI GCATC 4 cut(s) 1236, 1251, 1262, 1270
SfcI CTRYAG 3 cut(s) 243, 535, 716
SfuI TTCGAA 1 cut(s) 1249
SinI GGWCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
SmiMI CAYNNNNRTG 4 cut(s) 62, 624, 997, 1118
Sse9I AATT 7 cut(s) 446, 642, 862, 960, 1143, 1319, 1377
SsiI CCGC 5 cut(s) 287, 436, 734, 1196, 1382
SstI GAGCTC 1 cut(s) 695
StyD4I CCNGG 2 cut(s) 187, 946
StyI CCWWGG 3 cut(s) 955, 1222, 1431
TaaI ACNGT 4 cut(s) 213, 299, 804, 1018
TaiI ACGT 4 cut(s) 273, 777, 921, 1122
TaqI TCGA 9 cut(s) 82, 576, 695, 753, 834, 896, 1249, 1317, 1394
TaqII GACCGA 2 cut(s) 1018, 1078
TasI AATT 7 cut(s) 446, 642, 862, 960, 1143, 1319, 1377
TauI GCSGC 1 cut(s) 438
TfiI GAWTC 8 cut(s) 261, 368, 406, 697, 750, 931, 1025, 1396
Tru1I TTAA 3 cut(s) 5, 62, 806
Tru9I TTAA 3 cut(s) 5, 62, 806
TscAI CASTG 5 cut(s) 222, 319, 378, 430, 799
TseFI GTSAC 2 cut(s) 213, 1099
TseI GCWGC 1 cut(s) 1275
Tsp45I GTSAC 2 cut(s) 213, 1099
TspDTI ATGAA 4 cut(s) 31, 391, 731, 1458
TspGWI ACGGA 7 cut(s) 273, 561, 771, 838, 943, 1121, 1344
TspRI CASTG 5 cut(s) 222, 319, 378, 430, 799
Tth111I GACNNNGTC 1 cut(s) 1127
VpaK11BI GGWCC 7 cut(s) 191, 428, 465, 485, 653, 944, 1080
VspI ATTAAT 1 cut(s) 62
XagI CCTNNNNNAGG 1 cut(s) 1332
XceI RCATGY 1 cut(s) 1002
XmiI GTMKAC 1 cut(s) 715
XmnI GAANNNNTTC 1 cut(s) 1323
Zsp2I ATGCAT 1 cut(s) 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.