Gene Detail - Rorug03G0227400

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0012763

Physical Location & Seq

Genomic Coordinates Reverse (-)

20900994 .. 20901069

Gene Structure 76 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004650 GO:0005575 GO:0005618 GO:0005623 GO:0008150 GO:0009664 GO:0009825 GO:0009827 GO:0009831 GO:0009987 GO:0016043 GO:0016049 GO:0016787 GO:0016798 GO:0030312 GO:0040007 GO:0042545 GO:0042547 GO:0044464 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28 Pectate_lyase_3

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02460
fragaria_vesca	FvH4_1g26650
malus_domestica	MD09G1287300.v1.1 MD17G1279500.v1.1
prunus_persica	Prupe.3G005900_v2.0.a1 Prupe.6G307200_v2.0.a1
pyrus_communis	pycom09g19460 pycom17g27760
rosa_chinensis	RchiOBHm_Chr3g0486841
rosa_laevigata	RLG00000023055
rosa_multiflora	Rmu_sc0005709.1_g000005
rosa_roxburghii	Rroxscaffold_6G00395520
rosa_rugosa	Rorug03G0227400.1
rosa_samantha	Rh3AG277500 Rh3BG312600 Rh3CG311500 Rh3DG308100
rosa_wichuraiana	Rw3G024640

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.