AT1G04160
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
1086170 .. 1096510
10341 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04160.1

Sequence Viewer

Length: 4503 bp
ATGGTTGCTACCTTCAACCCTGCAGTTGGGTCCCATGTGTGGGTGGAGGACCCCGATGAAGCATGGTTAGATGGTGAAGTTGTAGAGATCAACGGTGACCAGATCAAAGTTCTCTGCGCTTCAGGAAAACAAGTCGTTGTTAAAGATTCCAATATTTATCCAAAAGATGTTGAAGCGCCCGCATCTGGGGTGGAAGATATGACAAGGCTGGCTTATTTACATGAACCTGGAGTCCTTCAGAATTTGCAATCAAGATATGATATAAATGAGATTTATACATATACGGGAAGCATACTGATTGCTGTTAACCCGTTTAGAAGACTTCCGCATCTATATAGTAGCCATATGATGACTCAATATAAAGGTGCTTCCCTCGGTGAGCTGAGTCCACATCCTTTTGCCGTTGCAGATGCTGCATATAGACAGATGGTTAATGAAGGAGTTAGTCAGTCTATCTTGGTTAGCGGTGAAAGTGGTGCTGGTAAAACTGAAAGCACAAAGTTGCTTATGAGATATCTTGCCTTCATGGGAGGGCGAGGTGCTGCTACCGAAGGAAGGACTGTCGAGCAGAAAGTGTTAGAGTCGAATCCTGTTTTAGAAGCATTTGGAAATGCAAAGACTGTTAAGAACAATAATTCCAGTCGATTTGGTAAGTTCGTGGAGATTCAATTTGACCAATCGGGGAGGATATCTGGAGCTGCTATAAGAACTTATTTGTTGGAAAGATCACGTGTTTGCCAGGTGTCCGATCCCGAAAGAAACTATCATTGTTTCTACATGCTTTGTGCTGCACCAGAAGAAGATGCTAAGAAGTTTAAGCTTGGTGATCCTAAGATATACCACTATCTCAATCAGTCTAAGTGTATACAATTGGATGCTATGAATGATGCGGAGGAATATCATGCAACAAAAAAGGCTATGGATGTCGTCGGGATCAGTTCCGAAGAGCAGGATGCAATTTTCCGTGTTGTGGCTTCCATTCTGCATCTTGGGAATATTGAATTTGCTAAAGGGACAGAGATTGATTCATCAATTCCCAGAGATGAAAAATCTTGGTTTCATTTAAAAACTGCCGCCGAGCTTCTCATGTGTAATGAAAAGTCACTTGAGGATTCTCTATGCAAGCGTATCATGGCAACCCGGGATGAAACAATCACAAAAACTCTCGATCCAGAAGCCGCTCTTCTTAGCCGAGATGCTTTGGCAAAAGTCATGTACTCAAGGTTGTTTGACTGGCTCGTTGAGAAGATTAATACTTCAATTGGTCAAGATCCTGATTCAAAGTACTTGATTGGTGTTCTGGATATATATGGATTCGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAATTTGACTAATGAGAAACTTCAGCAGCACTTTAATCAGCACGTCTTTAAAATGGAGCAAGAGGAGTATAAAAAAGAGGAGATCAACTGGAGCTATATTGAGTTTGTTGACAATCAAGATATTTTAGACTTAATAGAAAAGAAACCCGGAGGTATTATTGCTCTTCTAGATGAAGCTTGCATGTTTCCTAGATCAACACACGAGACATTTGCTCAGAAACTATACCAGACATACAAAAACCACAAGCGCTTTACCAAGCCGAAATTGGCTCGTAGCGACTTCACTATTTGTCATTATGCTGGTGATGTCACGTATCAGACTGAACTTTTTCTAGACAAGAACAAGGATTATGTTATTGCTGAGCATCAAGCGTTGTTAAATGCTTCTACATGTTCATTTGTTGCAAATTTGTTCCCACCAGTATCTGACGATTCCAAACAATCAAAATTCTCCTCTATAGGTACCCGTTTCAAGCAACAATTGGTATCATTGCTTGAGATTCTCAATACAACGGAGCCACATTATATCAGATGTATAAAGCCTAATAATCTTCTGAAGCCTGGAATCTTTGAGAACCAAAACGTTCTACAGCAATTGCGTTGCGGGGGAGTGATGGAGGCAATCCGGATTAGTTGTGCTGGTTATCCTACTAGGAAGCACTTTGACGAGTTCTTGAACAGATTTGGTATCATTGCTCCACAAGTGTTGGACAAGAATTCTAATGAGCCAGCTGCCTGCAAGAAGCTTCTTGATAAGGCGGGACTTGAAGGATATCAGATTGGTAAATCAAAGGTTTTTCTTAGGGCTGGACAAATGGCAGACTTGGATACTAGAAGAACTGAAATCTTGGGAAGATCGGCGAGCATTATCCAAAGAAAAGTGCGATCATATCTTGCGCAGAAAACTTTTATCCAACTGCGTATTTCTGCTACACAAATCCAAGCAGTTTGTAGAGGTTATCTTGCTAGAAGTATATACGAAGGCATGCGCAGGGAAGCTGCTGCTTTGAAAATCCAGAGAGACTTGCGTAAGTTTCTGGCCAGGAAAGCTTACACTGAGCTATTTTCTGCTACTATTTTAATTCAAGCGGGTATGCGTGGTATGGTTTCCCGAAAGGAATTGTGTCTCAGAAGGCAGACTAAAGCTGCAACCATAATCCAGACCCGGTGTCGCGTATACTTGGCTCGGCTGCATTACCGAAAACTAAAGAAAGCAGCCATCACGACACAATGTGCATGGAGAGGAAAAGTTGCGCGGAAAGAACTCAAAAATCTTAAGATGGCTGCTCGAGAAACAGGAGCTCTTCAAGAAGCCAAAAACAAGCTAGAGAAGCAAGTTGAGGAACTGACATGGAGATTACAGTTAGAAAAACGAATGAGGACTGACCTGGAAGAGGCCAAAAAGCAAGAAAATGCAAAATATGAGTCTTCTTTAGAGGAAATACAAAATAAGTTCAAAGAAACCGAGGCATTACTCATTAAAGAGCGTGAAGCTGCCAAGACAGTTTCCGAGGTGCTCCCTATTATTAAGGAGGTTCCTGTAGTTGACCAGGAATTAATGGAGAAACTCACAAATGAAAATGAAAAGTTGAAGGGGATGGTGAGTTCTCTTGAGATAAAGATAGATGAGACAGCAAAAGAACTTCATGAAACAGCCAGGATTAGTCAGGATAGACTAAAGCAAGCGTTGGCGGCAGAATCTAAAGTAGCGAAGTTGAAGACTGCGATGCAGAGGCTTGAAGAGAAGATTTCAGACATGGAAACTGAGAAACAAATTATGCTTCAGCAAACAATCTTAAACACTCCTGTGAAATCTGTAGCAGGGCATCCTCCAACTGCAACTATTAAGAATCTGGAAAATGGCCACCGTACAAACTTGGAAAACCAGTTCAATGAAGTTGAGGTCAATGGAAATGCTGGGAAATCTGCTGCAGAACGTCAACTTGAGAATGTTGATACTCTCATCGACTGTGTTAAGGAAAACATTGGTTTCAGTAATGGGAAACCTATTGCTGCATTTACAATATACAAGTGTCTTCTTCACTGGAAGTGCTTTGAATCAGAGAAGACTAGTGCGTTTGATCGTCTTATTGAGATGATTGGTTCCGCGATTGAGAATGAAGATGACAATGGTCATTTGGCGTATTGGTTGACAAACACATCGGCACTACTGTTTTTACTTCAAAAAAGTCTTAAACCTGCTGGCGCCGGAGCAACGGCAAGCAAGAAGCCACCCATAACAACTTCCTTGTTTGGAAGAATGGCCTTGAGCTTCCGCTCATCACCAAACCTTGCTGCTGCGGCTGAAGCTGCTGCTCTTGCGGTGATCCGCCCAGTGGAGGCAAAATACCCGGCTCTGCTTTTCAAGCAACAGCTTGCAGCATATGTGGAGAAAATATTTGGGATGATTAGGGATAACTTGAAGAAAGAGCTCTCAGCTTTAATATCTATGTGCATTCAGGCACCGAGAATTTCAAAAGGAGGGATACAAAGATCTGCTAGATCTCTTGGAAAAGATTCTCCTGCTATTCACTGGCAGAGCATTATTGATGGTCTCAATTCGCTGCTTGCCATATTGAAAGATAATTATGTTCCTTTGGTACTCATCCAGAAGATACACACTCAAACTTTCTCGTTCGTCAATGTGCAACTATTTAACAGCCTTCTACTGCGTAAAGAGTGTTGTACATTCAGCAATGGAGAATTTGTAAAGTCTGGGCTTGCAGAGCTAGAATTGTGGTGCGGCCAAGTCAATGAATATGCTGGGCCATCTTGGGATGAACTGAAACACATCAGACAAGCTGTTGGGTTCCTGGTTATCCACCAGAAGTACAGAGTATCATACGATGATATAGTACATGATCTTTGCCCGATCCTTAGTGTCCAACAACTTTACCGGATATGCACATTATACTGGGACGACTGCTATAACACCCGAAGTGTGTCTCAAGAGGTAATATCGAGCATGCGTGCGCTCATGACAGAAGAATCCAACGATGCCGACAGCAATTCCTTCTTGTTGGATGATAATTCCAGCATTCCCTTCTCAATAGACGAGATTTCGAATTCGATGCACGAAAAAGACTTTGCGAGTGTCAAACCGGCCAAAGAGCTACTGGAAAACCCAGAATTCGTATTCTTGCACTAG

Protein Analysis

1500

Amino Acids

169.49

Weight (kDa)

7.91

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 9 - 52 1.8e-15 Myosin N-terminal SH3-like domain
Myosin_head PF00063 64 - 720 8.6e-258 Myosin head (motor domain)
DIL PF01843 1324 - 1426 1.7e-26 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 2253, 2345
Acc36I ACCTGC 1 cut(s) 3562
Acc65I GGTACC 1 cut(s) 1817
AccB1I GGYRCC 3 cut(s) 1817, 3560, 3817
AccBSI CCGCTC 2 cut(s) 1181, 3633
AccI GTMKAC 2 cut(s) 865, 2532
AccII CGCG 3 cut(s) 2529, 2611, 3464
AccIII TCCGGA 1 cut(s) 1980
AclI AACGTT 1 cut(s) 1938
AclWI GGATC 7 cut(s) 743, 821, 941, 1163, 1265, 3676, 4222
AcoI YGGCCR 4 cut(s) 2394, 3217, 4099, 4458
AcsI RAATTY 9 cut(s) 241, 1001, 1762, 1802, 2071, 3825, 4058, 4420, 4484
AcuI CTGAAG 6 cut(s) 105, 221, 1361, 1931, 3122, 3681
AcvI CACGTG 1 cut(s) 731
AcyI GRCGYC 1 cut(s) 3561
AdeI CACNNNGTG 1 cut(s) 2588
AfaI GTAC 8 cut(s) 1217, 1286, 1819, 3226, 3957, 4042, 4187, 4212
AfeI AGCGCT 1 cut(s) 1604
AflII CTTAAG 1 cut(s) 2630
AflIII ACRYGT 2 cut(s) 730, 1745
AhdI GACNNNNNGTC 1 cut(s) 2523
AhlI ACTAGT 1 cut(s) 3425
AjiI CACGTC 1 cut(s) 1399
AjnI CCWGG 8 cut(s) 226, 738, 1915, 2396, 2742, 2904, 3011, 4167
AleI CACNNNNGTG 1 cut(s) 3161
AloI GAACNNNNNNTCC 8 cut(s) 216, 248, 620, 652, 2944, 2976, 3227, 3259
Alw21I GWGCWC 3 cut(s) 2659, 2874, 3789
Alw26I GTCTC 6 cut(s) 1553, 2370, 2486, 2978, 3914, 4305
AlwI GGATC 7 cut(s) 743, 821, 941, 1163, 1265, 3676, 4222
AlwNI CAGNNNCTG 2 cut(s) 413, 1781
Ama87I CYCGRG 2 cut(s) 1140, 2643
Aor13HI TCCGGA 1 cut(s) 1980
Aor51HI AGCGCT 1 cut(s) 1604
AoxI GGCC 7 cut(s) 2394, 2751, 3217, 3618, 4099, 4121, 4458
ApoI RAATTY 9 cut(s) 241, 1001, 1762, 1802, 2071, 3825, 4058, 4420, 4484
ArsI GACNNNNNNTTYG 2 cut(s) 2765, 2797
AseI ATTAAT 2 cut(s) 1251, 2912
Asp700I GAANNNNTTC 2 cut(s) 1683, 3871
Asp718I GGTACC 1 cut(s) 1817
AspLEI GCGC 8 cut(s) 119, 178, 1605, 2254, 2346, 2611, 3563, 4330
AspS9I GGNCC 3 cut(s) 30, 49, 4121
AsuC2I CCSGG 5 cut(s) 1141, 1142, 1503, 2521, 3707
AsuHPI GGTGA 9 cut(s) 86, 107, 389, 479, 836, 1670, 2968, 3630, 3691
AsuII TTCGAA 1 cut(s) 4418
AvaI CYCGRG 2 cut(s) 1140, 2643
AvaII GGWCC 2 cut(s) 30, 49
BalI TGGCCA 2 cut(s) 2396, 3219
BanI GGYRCC 3 cut(s) 1817, 3560, 3817
BanII GRGCYC 2 cut(s) 2659, 3789
BauI CACGAG 1 cut(s) 1556
BbrPI CACGTG 1 cut(s) 731
BbsI GAAGAC 5 cut(s) 325, 2775, 3080, 3383, 3428
Bbv12I GWGCWC 3 cut(s) 2659, 2874, 3789
BccI CCATC 8 cut(s) 65, 421, 1963, 2582, 2629, 2947, 3899, 4132
BceAI ACGGC 2 cut(s) 386, 3588
BcgI CGANNNNNNTGC 4 cut(s) 1547, 1581, 4408, 4442
BciT130I CCWGG 8 cut(s) 228, 740, 1917, 2398, 2744, 2906, 3013, 4169
BciVI GTATCC 2 cut(s) 2176, 3834
BcnI CCSGG 5 cut(s) 1141, 1142, 1503, 2521, 3707
BcoDI GTCTC 6 cut(s) 1553, 2370, 2486, 2978, 3914, 4305
BcuI ACTAGT 1 cut(s) 3425
BfmI CTRYAG 6 cut(s) 21, 1812, 1943, 2895, 3171, 3285
BfoI RGCGCY 3 cut(s) 179, 1606, 3564
BfrI CTTAAG 1 cut(s) 2630
BfuAI ACCTGC 1 cut(s) 3562
BfuI GTATCC 2 cut(s) 2176, 3834
BglII AGATCT 2 cut(s) 3848, 3857
BlpI GCTNAGC 1 cut(s) 1716
BmcAI AGTACT 1 cut(s) 1286
Bme18I GGWCC 2 cut(s) 30, 49
BmeRI GACNNNNNGTC 1 cut(s) 2523
BmeT110I CYCGRG 2 cut(s) 1140, 2643
BmgBI CACGTC 1 cut(s) 1399
BmgT120I GGNCC 3 cut(s) 30, 49, 4121
BmrI ACTGGG 2 cut(s) 3683, 4279
BmuI ACTGGG 2 cut(s) 3683, 4279
BoxI GACNNNNGTC 1 cut(s) 3486
BpiI GAAGAC 5 cut(s) 325, 2775, 3080, 3383, 3428
BpmI CTGGAG 3 cut(s) 249, 714, 1465
Bpu1102I GCTNAGC 1 cut(s) 1716
Bpu14I TTCGAA 1 cut(s) 4418
BpuEI CTTGAG 7 cut(s) 1127, 1204, 1871, 2987, 3320, 3643, 4287
BpuMI CCSGG 5 cut(s) 1141, 1142, 1503, 2521, 3707
BsaAI YACGTR 2 cut(s) 731, 1668
BsaHI GRCGYC 1 cut(s) 3561
BsaI GGTCTC 1 cut(s) 3914
BsaJI CCNNGG 4 cut(s) 373, 1140, 2820, 2865
BsaWI WCCGGW 2 cut(s) 1980, 4251
BsaXI ACNNNNNCTCC 2 cut(s) 4047, 4077
Bse118I RCCGGY 1 cut(s) 4456
Bse3DI GCAATG 3 cut(s) 1844, 2046, 4057
BseAI TCCGGA 1 cut(s) 1980
BseBI CCWGG 8 cut(s) 228, 740, 1917, 2398, 2744, 2906, 3013, 4169
BseDI CCNNGG 4 cut(s) 373, 1140, 2820, 2865
BseMI GCAATG 3 cut(s) 1844, 2046, 4057
BseMII CTCAG 7 cut(s) 374, 1583, 1707, 2403, 2497, 3111, 3804
BseRI GAGGAG 3 cut(s) 1433, 1448, 1798
BseYI CCCAGC 2 cut(s) 3272, 4118
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 3 cut(s) 2529, 2611, 3464
BshFI GGCC 7 cut(s) 2396, 2753, 3219, 3620, 4101, 4123, 4460
BshNI GGYRCC 3 cut(s) 1817, 3560, 3817
BsiHKAI GWGCWC 3 cut(s) 2659, 2874, 3789
BsiHKCI CYCGRG 2 cut(s) 1140, 2643
BsiSI CCGG 8 cut(s) 1141, 1503, 1981, 2521, 3564, 3707, 4252, 4457
BslFI GGGAC 4 cut(s) 16, 1027, 2130, 4286
BsmAI GTCTC 6 cut(s) 1553, 2370, 2486, 2978, 3914, 4305
BsmFI GGGAC 4 cut(s) 16, 1027, 2130, 4286
BsmI GAATGC 2 cut(s) 3810, 4392
BsnI GGCC 7 cut(s) 2396, 2753, 3219, 3620, 4101, 4123, 4460
Bso31I GGTCTC 1 cut(s) 3914
BsoBI CYCGRG 2 cut(s) 1140, 2643
Bsp119I TTCGAA 1 cut(s) 4418
Bsp1286I GDGCHC 3 cut(s) 2659, 2874, 3789
Bsp13I TCCGGA 1 cut(s) 1980
Bsp1407I TGTACA 1 cut(s) 4040
Bsp1720I GCTNAGC 1 cut(s) 1716
BspANI GGCC 7 cut(s) 2396, 2753, 3219, 3620, 4101, 4123, 4460
BspCNI CTCAG 7 cut(s) 375, 1582, 1708, 2404, 2496, 3112, 3803
BspEI TCCGGA 1 cut(s) 1980
BspFNI CGCG 3 cut(s) 2529, 2611, 3464
BspHI TCATGA 2 cut(s) 3001, 4332
BspMAI CTGCAG 2 cut(s) 25, 3289
BspMI ACCTGC 1 cut(s) 3562
BspPI GGATC 7 cut(s) 743, 821, 941, 1163, 1265, 3676, 4222
BspQI GCTCTTC 4 cut(s) 939, 1188, 1524, 2664
BspT104I TTCGAA 1 cut(s) 4418
BspT107I GGYRCC 3 cut(s) 1817, 3560, 3817
BspTI CTTAAG 1 cut(s) 2630
BspTNI GGTCTC 1 cut(s) 3914
BsrBI CCGCTC 2 cut(s) 1181, 3633
BsrDI GCAATG 3 cut(s) 1844, 2046, 4057
BsrFI RCCGGY 1 cut(s) 4456
BsrGI TGTACA 1 cut(s) 4040
BssAI RCCGGY 1 cut(s) 4456
BssECI CCNNGG 4 cut(s) 373, 1140, 2820, 2865
BssNAI GTATAC 2 cut(s) 866, 2533
BssNI GRCGYC 1 cut(s) 3561
BssSI CACGAG 1 cut(s) 1556
Bst1107I GTATAC 2 cut(s) 866, 2533
Bst2BI CACGAG 1 cut(s) 1556
Bst2UI CCWGG 8 cut(s) 228, 740, 1917, 2398, 2744, 2906, 3013, 4169
Bst4CI ACNGT 9 cut(s) 95, 562, 622, 1337, 2718, 2860, 3224, 3326, 3528
Bst6I CTCTTC 6 cut(s) 939, 1188, 1524, 2664, 2742, 3090
BstACI GRCGYC 1 cut(s) 3561
BstAFI CTTAAG 1 cut(s) 2630
BstAPI GCANNNNNTGC 1 cut(s) 413
BstAUI TGTACA 1 cut(s) 4040
BstBAI YACGTR 2 cut(s) 731, 1668
BstBI TTCGAA 1 cut(s) 4418
BstEII GGTNACC 1 cut(s) 95
BstENI CCTNNNNNAGG 1 cut(s) 2747
BstFNI CGCG 3 cut(s) 2529, 2611, 3464
BstH2I RGCGCY 3 cut(s) 179, 1606, 3564
BstHHI GCGC 8 cut(s) 119, 178, 1605, 2254, 2346, 2611, 3563, 4330
BstMAI GTCTC 6 cut(s) 1553, 2370, 2486, 2978, 3914, 4305
BstNI CCWGG 8 cut(s) 228, 740, 1917, 2398, 2744, 2906, 3013, 4169
BstNSI RCATGY 5 cut(s) 781, 1540, 1749, 2344, 4324
BstPAI GACNNNNGTC 1 cut(s) 3486
BstPI GGTNACC 1 cut(s) 95
BstSFI CTRYAG 6 cut(s) 21, 1812, 1943, 2895, 3171, 3285
BstUI CGCG 3 cut(s) 2529, 2611, 3464
BstV2I GAAGAC 5 cut(s) 325, 2775, 3080, 3383, 3428
BstX2I RGATCY 3 cut(s) 1270, 3848, 3857
BstYI RGATCY 3 cut(s) 1270, 3848, 3857
BstZ17I GTATAC 2 cut(s) 866, 2533
BsuI GTATCC 2 cut(s) 2176, 3834
BsuRI GGCC 7 cut(s) 2396, 2753, 3219, 3620, 4101, 4123, 4460
BtgZI GCGATG 1 cut(s) 3095
BtrI CACGTC 1 cut(s) 1399
BtsIMutI CAGTG 4 cut(s) 2409, 3397, 3696, 3886
BveI ACCTGC 1 cut(s) 3562
CaiI CAGNNNCTG 2 cut(s) 413, 1781
CciI TCATGA 2 cut(s) 3001, 4332
CfoI GCGC 8 cut(s) 119, 178, 1605, 2254, 2346, 2611, 3563, 4330
Cfr10I RCCGGY 1 cut(s) 4456
Cfr13I GGNCC 3 cut(s) 30, 49, 4121
Cfr9I CCCGGG 1 cut(s) 1140
Csp6I GTAC 8 cut(s) 1216, 1285, 1818, 3225, 3956, 4041, 4186, 4211
CspCI CAANNNNNGTGG 2 cut(s) 2043, 2078
CviQI GTAC 8 cut(s) 1216, 1285, 1818, 3225, 3956, 4041, 4186, 4211
DinI GGCGCC 1 cut(s) 3562
DraI TTTAAA 2 cut(s) 1065, 1405
DraIII CACNNNGTG 1 cut(s) 2588
DriI GACNNNNNGTC 1 cut(s) 2523
EaeI YGGCCR 4 cut(s) 2394, 3217, 4099, 4458
Eam1104I CTCTTC 6 cut(s) 939, 1188, 1524, 2664, 2742, 3090
Eam1105I GACNNNNNGTC 1 cut(s) 2523
EarI CTCTTC 6 cut(s) 939, 1188, 1524, 2664, 2742, 3090
EciI GGCGGA 1 cut(s) 3674
Ecl136II GAGCTC 2 cut(s) 2657, 3787
Eco24I GRGCYC 2 cut(s) 2659, 3789
Eco31I GGTCTC 1 cut(s) 3914
Eco32I GATATC 3 cut(s) 515, 690, 2129
Eco47I GGWCC 2 cut(s) 30, 49
Eco47III AGCGCT 1 cut(s) 1604
Eco53kI GAGCTC 2 cut(s) 2657, 3787
Eco57I CTGAAG 6 cut(s) 105, 221, 1361, 1931, 3122, 3681
Eco72I CACGTG 1 cut(s) 731
Eco88I CYCGRG 2 cut(s) 1140, 2643
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 2 cut(s) 2657, 3787
EcoNI CCTNNNNNAGG 1 cut(s) 2747
EcoO109I RGGNCCY 2 cut(s) 30, 49
EcoO65I GGTNACC 1 cut(s) 95
EcoRI GAATTC 3 cut(s) 2071, 4420, 4484
EcoRII CCWGG 8 cut(s) 226, 738, 1915, 2396, 2742, 2904, 3011, 4167
EcoRV GATATC 3 cut(s) 515, 690, 2129
EcoT38I GRGCYC 2 cut(s) 2659, 3789
EgeI GGCGCC 1 cut(s) 3562
EheI GGCGCC 1 cut(s) 3562
FalI AAGNNNNNCTT 4 cut(s) 196, 228, 1167, 1199
FaqI GGGAC 4 cut(s) 16, 1027, 2130, 4286
FauI CCCGC 4 cut(s) 187, 1952, 2107, 2437
FauNDI CATATG 2 cut(s) 345, 3739
FblI GTMKAC 2 cut(s) 865, 2532
FriOI GRGCYC 2 cut(s) 2659, 3789
FspI TGCGCA 2 cut(s) 2253, 2345
GlaI GCGC 8 cut(s) 118, 177, 1604, 2253, 2345, 2610, 3562, 4329
GsaI CCCAGC 2 cut(s) 3276, 4122
GsuI CTGGAG 3 cut(s) 249, 714, 1465
HaeII RGCGCY 3 cut(s) 179, 1606, 3564
HaeIII GGCC 7 cut(s) 2396, 2753, 3219, 3620, 4101, 4123, 4460
HapII CCGG 8 cut(s) 1141, 1503, 1981, 2521, 3564, 3707, 4252, 4457
HhaI GCGC 8 cut(s) 119, 178, 1605, 2254, 2346, 2611, 3563, 4330
Hin1I GRCGYC 1 cut(s) 3561
Hin6I GCGC 8 cut(s) 117, 176, 1603, 2252, 2344, 2609, 3561, 4328
HinP1I GCGC 8 cut(s) 117, 176, 1603, 2252, 2344, 2609, 3561, 4328
HincII GTYRAC 5 cut(s) 307, 1465, 2902, 3296, 3507
HindII GTYRAC 5 cut(s) 307, 1465, 2902, 3296, 3507
HindIII AAGCTT 4 cut(s) 818, 1530, 2099, 2403
HpaI GTTAAC 1 cut(s) 307
HpaII CCGG 8 cut(s) 1141, 1503, 1981, 2521, 3564, 3707, 4252, 4457
HphI GGTGA 9 cut(s) 86, 107, 389, 479, 836, 1670, 2968, 3630, 3691
Hpy166II GTNNAC 8 cut(s) 307, 389, 866, 1465, 2533, 2902, 3296, 3507
Hpy8I GTNNAC 8 cut(s) 307, 389, 866, 1465, 2533, 2902, 3296, 3507
Hpy99I CGWCG 1 cut(s) 932
HpyCH4III ACNGT 9 cut(s) 95, 562, 622, 1337, 2718, 2860, 3224, 3326, 3528
HpyCH4IV ACGT 5 cut(s) 730, 1398, 1667, 1938, 3292
HpySE526I ACGT 5 cut(s) 730, 1398, 1667, 1938, 3292
Hsp92I GRCGYC 1 cut(s) 3561
HspAI GCGC 8 cut(s) 117, 176, 1603, 2252, 2344, 2609, 3561, 4328
KasI GGCGCC 1 cut(s) 3560
KflI GGGWCCC 1 cut(s) 30
Kpn2I TCCGGA 1 cut(s) 1980
KpnI GGTACC 1 cut(s) 1821
KspAI GTTAAC 1 cut(s) 307
LguI GCTCTTC 4 cut(s) 939, 1188, 1524, 2664
LmnI GCTCC 8 cut(s) 695, 1411, 1446, 1870, 2056, 2654, 2877, 3566
MaeII ACGT 5 cut(s) 730, 1398, 1667, 1938, 3292
MaeIII GTNAC 3 cut(s) 95, 1101, 1663
MbiI CCGCTC 2 cut(s) 1181, 3633
MfeI CAATTG 4 cut(s) 869, 1260, 1835, 1949
MflI RGATCY 3 cut(s) 1270, 3848, 3857
MhlI GDGCHC 3 cut(s) 2659, 2874, 3789
MlsI TGGCCA 2 cut(s) 2396, 3219
MluNI TGGCCA 2 cut(s) 2396, 3219
Mly113I GGCGCC 1 cut(s) 3561
MlyI GAGTC 5 cut(s) 240, 346, 394, 590, 2789
MmeI TCCRAC 7 cut(s) 699, 2043, 2293, 3212, 4264, 4356, 4371
Mox20I TGGCCA 2 cut(s) 2396, 3219
MroI TCCGGA 1 cut(s) 1980
MroXI GAANNNNTTC 2 cut(s) 1683, 3871
MscI TGGCCA 2 cut(s) 2396, 3219
MslI CAYNNNNRTG 1 cut(s) 3161
Msp20I TGGCCA 2 cut(s) 2396, 3219
MspA1I CMGCKG 1 cut(s) 2087
MspCI CTTAAG 1 cut(s) 2630
MspI CCGG 8 cut(s) 1141, 1503, 1981, 2521, 3564, 3707, 4252, 4457
MunI CAATTG 4 cut(s) 869, 1260, 1835, 1949
Mva1269I GAATGC 2 cut(s) 3810, 4392
MvaI CCWGG 8 cut(s) 228, 740, 1917, 2398, 2744, 2906, 3013, 4169
MvnI CGCG 3 cut(s) 2529, 2611, 3464
NarI GGCGCC 1 cut(s) 3561
NciI CCSGG 5 cut(s) 1141, 1142, 1503, 2521, 3707
NdeI CATATG 2 cut(s) 345, 3739
NmeAIII GCCGAG 3 cut(s) 1102, 1217, 2521
NmuCI GTSAC 3 cut(s) 95, 1101, 1663
NsbI TGCGCA 2 cut(s) 2253, 2345
NspI RCATGY 5 cut(s) 781, 1540, 1749, 2344, 4324
NspV TTCGAA 1 cut(s) 4418
OliI CACNNNNGTG 1 cut(s) 3161
PaeI GCATGC 2 cut(s) 2344, 4324
PaeR7I CTCGAG 1 cut(s) 2643
PagI TCATGA 2 cut(s) 3001, 4332
PciI ACATGT 1 cut(s) 1745
PciSI GCTCTTC 4 cut(s) 939, 1188, 1524, 2664
PctI GAATGC 2 cut(s) 3810, 4392
PdmI GAANNNNTTC 2 cut(s) 1683, 3871
PleI GAGTC 5 cut(s) 239, 346, 393, 589, 2788
PluTI GGCGCC 1 cut(s) 3564
PmaCI CACGTG 1 cut(s) 731
PmlI CACGTG 1 cut(s) 731
PpsI GAGTC 5 cut(s) 239, 346, 393, 589, 2788
Ppu21I YACGTR 2 cut(s) 731, 1668
PpuMI RGGWCCY 2 cut(s) 30, 49
PscI ACATGT 1 cut(s) 1745
PshAI GACNNNNGTC 1 cut(s) 3486
PshBI ATTAAT 2 cut(s) 1251, 2912
Psp124BI GAGCTC 2 cut(s) 2659, 3789
Psp1406I AACGTT 1 cut(s) 1938
Psp5II RGGWCCY 2 cut(s) 30, 49
Psp6I CCWGG 8 cut(s) 226, 738, 1915, 2396, 2742, 2904, 3011, 4167
PspCI CACGTG 1 cut(s) 731
PspEI GGTNACC 1 cut(s) 95
PspFI CCCAGC 2 cut(s) 3272, 4118
PspGI CCWGG 8 cut(s) 226, 738, 1915, 2396, 2742, 2904, 3011, 4167
PspPI GGNCC 3 cut(s) 30, 49, 4121
PspPPI RGGWCCY 2 cut(s) 30, 49
PstI CTGCAG 2 cut(s) 25, 3289
PstNI CAGNNNCTG 2 cut(s) 413, 1781
PsuI RGATCY 3 cut(s) 1270, 3848, 3857
PvuII CAGCTG 1 cut(s) 2087
RsaI GTAC 8 cut(s) 1217, 1286, 1819, 3226, 3957, 4042, 4187, 4212
RsaNI GTAC 8 cut(s) 1216, 1285, 1818, 3225, 3956, 4041, 4186, 4211
RseI CAYNNNNRTG 1 cut(s) 3161
SacI GAGCTC 2 cut(s) 2659, 3789
SapI GCTCTTC 4 cut(s) 939, 1188, 1524, 2664
Sau96I GGNCC 3 cut(s) 30, 49, 4121
ScaI AGTACT 1 cut(s) 1286
SchI GAGTC 5 cut(s) 240, 346, 394, 590, 2789
SduI GDGCHC 3 cut(s) 2659, 2874, 3789
SfcI CTRYAG 6 cut(s) 21, 1812, 1943, 2895, 3171, 3285
SfoI GGCGCC 1 cut(s) 3562
Sfr274I CTCGAG 1 cut(s) 2643
SfuI TTCGAA 1 cut(s) 4418
SinI GGWCC 2 cut(s) 30, 49
SlaI CTCGAG 1 cut(s) 2643
SmaI CCCGGG 1 cut(s) 1142
SmiMI CAYNNNNRTG 1 cut(s) 3161
SmlI CTYRAG 9 cut(s) 1106, 1219, 1850, 2630, 2643, 2966, 3299, 3622, 4302
SmoI CTYRAG 9 cut(s) 1106, 1219, 1850, 2630, 2643, 2966, 3299, 3622, 4302
SpeI ACTAGT 1 cut(s) 3425
SphI GCATGC 2 cut(s) 2344, 4324
SspDI GGCGCC 1 cut(s) 3560
SspI AATATT 3 cut(s) 154, 997, 3753
SstI GAGCTC 2 cut(s) 2659, 3789
TaaI ACNGT 9 cut(s) 95, 562, 622, 1337, 2718, 2860, 3224, 3326, 3528
TaiI ACGT 5 cut(s) 733, 1401, 1670, 1941, 3295
TatI WGTACW 5 cut(s) 1215, 1284, 4040, 4185, 4210
TauI GCSGC 5 cut(s) 1076, 1181, 3050, 3659, 4101
TscAI CASTG 4 cut(s) 2416, 3404, 3696, 3893
TseFI GTSAC 3 cut(s) 95, 1101, 1663
Tsp45I GTSAC 3 cut(s) 95, 1101, 1663
TspGWI ACGGA 2 cut(s) 953, 1883
TspMI CCCGGG 1 cut(s) 1140
TspRI CASTG 4 cut(s) 2416, 3404, 3696, 3893
Vha464I CTTAAG 1 cut(s) 2630
VpaK11BI GGWCC 2 cut(s) 30, 49
VspI ATTAAT 2 cut(s) 1251, 2912
XagI CCTNNNNNAGG 1 cut(s) 2747
XapI RAATTY 9 cut(s) 241, 1001, 1762, 1802, 2071, 3825, 4058, 4420, 4484
XbaI TCTAGA 2 cut(s) 1522, 1687
XceI RCATGY 5 cut(s) 781, 1540, 1749, 2344, 4324
XcmI CCANNNNNNNNNTGG 2 cut(s) 1618, 4468
XhoI CTCGAG 1 cut(s) 2643
XmaI CCCGGG 1 cut(s) 1140
XmiI GTMKAC 2 cut(s) 865, 2532
XmnI GAANNNNTTC 2 cut(s) 1683, 3871
ZrmI AGTACT 1 cut(s) 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.